Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8765.t1
Gene name
Locationscaffold_37:3142..3994
Strand-
Gene length (bp)852
Transcript length (bp)852
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13883 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase 3.4E-33 67 255

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8765.t1
MVSHLASILTGALALLLPLTAHGFVVPLPDNLQAFLGRLDTSTPSPNINHIEDESALNRPSWFTSTLMARRLLAL
SPSGVISTNFPESLPPSAHAPSDVAGLSIGLREYIADCDGSLPSDFSHDDRGDPTILGLRIGTTFKNIAAGSNLS
LQLDWWDHLNEAGPVYPGLPLSPAALPRVTLFGYLENLPSPLPDDAAAALEKCFLEPHPDAKVWLPGASYSPHAS
FWARLVVTHAYWIGGFGDVQQIGWINLTEWQGVRPHGSVEGVGDGRGWQDVRLPGEKQ*
Coding >Pro_DTO377G3_2|g8765.t1
ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT
GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT
ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG
TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC
GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT
CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT
CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT
CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC
GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT
TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC
AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT
GTCCGGTTGCCGGGTGAGAAACAGTAA
Transcript >Pro_DTO377G3_2|g8765.t1
ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT
GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT
ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG
TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC
GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT
CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT
CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT
CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC
GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT
TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC
AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT
GTCCGGTTGCCGGGTGAGAAACAGTAA
Gene >Pro_DTO377G3_2|g8765.t1
ATGGTCTCTCATTTGGCCTCCATCCTCACTGGCGCTCTTGCGCTGCTTTTACCCCTCACGGCTCACGGCTTTGTT
GTCCCACTTCCAGACAATCTCCAAGCCTTTCTCGGACGACTAGATACTTCGACACCCAGCCCGAACATTAACCAT
ATTGAAGATGAAAGTGCCTTGAATCGACCGTCATGGTTCACTTCGACTTTGATGGCTCGTCGGCTGCTTGCGCTG
TCACCCTCTGGCGTCATCTCCACCAACTTCCCAGAGTCCCTCCCACCCTCCGCACATGCCCCATCAGATGTTGCC
GGTCTGTCTATCGGACTACGCGAGTACATTGCCGATTGTGATGGATCCCTGCCATCGGATTTCTCTCACGATGAT
CGCGGTGATCCAACAATTCTTGGCCTTCGCATTGGAACCACTTTTAAGAACATTGCAGCGGGATCTAATCTCAGT
CTCCAGTTAGACTGGTGGGATCATCTAAATGAGGCCGGTCCAGTCTACCCTGGTCTTCCTCTAAGCCCGGCTGCT
CTTCCCCGTGTCACCCTCTTCGGTTACTTGGAGAACCTTCCATCCCCGCTTCCCGATGACGCAGCTGCGGCCCTC
GAGAAGTGTTTCCTCGAGCCTCATCCCGATGCGAAGGTCTGGCTACCTGGTGCTTCTTATTCGCCACATGCGAGT
TTCTGGGCCCGGTTGGTGGTCACCCATGCTTACTGGATTGGTGGATTTGGCGATGTACAGCAGATTGGGTGGATC
AACCTCACGGAGTGGCAAGGGGTCCGACCACACGGCAGTGTAGAGGGCGTTGGTGATGGAAGAGGGTGGCAGGAT
GTCCGGTTGCCGGGTGAGAAACAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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