Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8762.t1
Gene name
Locationscaffold_36:229854..230677
Strand+
Gene length (bp)823
Transcript length (bp)435
Coding sequence length (bp)435
Protein length (aa) 145

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11807 UstYa Mycotoxin biosynthesis protein UstYa 4.1E-23 7 129

GO

GO Term Description Terminal node
GO:0043386 mycotoxin biosynthetic process Yes
GO:0009403 toxin biosynthetic process No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0009404 toxin metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0044550 secondary metabolite biosynthetic process No
GO:0019748 secondary metabolic process No
GO:0043385 mycotoxin metabolic process No
GO:0009058 biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.08 0.0 0.46
5d_25C Five days - 25 degrees Celsius 0.00 0.0 0.00
7d_25C Seven days - 25 degrees Celsius 0.00 0.0 0.00
10d_25C Ten days - 25 degrees Celsius 0.00 0.0 0.00
7d_15C Seven days - 15 degrees Celsius 0.00 0.0 0.00
7d_30C Seven days - 30 degrees Celsius 0.00 0.0 0.00

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 1.0 no
3d_25C 7d_25C 1.0 no
3d_25C 7d_15C 1.0 no
3d_25C 7d_30C 1.0 no
3d_25C 10d_25C 1.0 no
5d_25C 7d_25C 1.0 no
5d_25C 7d_15C 1.0 no
5d_25C 7d_30C 1.0 no
5d_25C 10d_25C 1.0 no
7d_25C 7d_15C 1.0 no
7d_25C 7d_30C 1.0 no
7d_25C 10d_25C 1.0 no
7d_15C 7d_30C 1.0 no
7d_15C 10d_25C 1.0 no
7d_30C 10d_25C 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8762.t1
MDAEDLKKEHRNIQSKLFTPVHEHINIEVTVIYDKPSDIKASSYVGEPSLVVDEAWYRLLRHHNIRIMEDELQAM
NQTSIPLRHGGGYQGMMAVFHELHCLKLVREAVHADYYYAEKSHAERAMLIGHTGQFYSSFFRYLHSPP*
Coding >Pro_DTO377G3_2|g8762.t1
ATGGACGCAGAGGACCTGAAGAAAGAACATCGAAATATTCAATCTAAATTGTTTACACCTGTCCATGAGCACATC
AATATCGAAGTCACAGTCATTTACGACAAGCCCAGCGATATCAAGGCTAGTTCATATGTGGGAGAGCCTAGTCTA
GTGGTTGATGAGGCCTGGTATCGACTCTTGCGTCATCACAACATACGCATTATGGAAGATGAGCTGCAAGCAATG
AACCAAACCTCTATTCCCCTCCGTCATGGGGGTGGATATCAAGGAATGATGGCCGTCTTCCACGAACTACATTGC
TTGAAACTCGTTCGTGAAGCCGTCCATGCCGACTACTATTACGCAGAAAAATCCCATGCCGAGAGAGCCATGTTG
ATTGGCCATACAGGTCAGTTTTATTCTAGCTTCTTCCGTTACCTGCATTCACCTCCCTGA
Transcript >Pro_DTO377G3_2|g8762.t1
ATGGACGCAGAGGACCTGAAGAAAGAACATCGAAATATTCAATCTAAATTGTTTACACCTGTCCATGAGCACATC
AATATCGAAGTCACAGTCATTTACGACAAGCCCAGCGATATCAAGGCTAGTTCATATGTGGGAGAGCCTAGTCTA
GTGGTTGATGAGGCCTGGTATCGACTCTTGCGTCATCACAACATACGCATTATGGAAGATGAGCTGCAAGCAATG
AACCAAACCTCTATTCCCCTCCGTCATGGGGGTGGATATCAAGGAATGATGGCCGTCTTCCACGAACTACATTGC
TTGAAACTCGTTCGTGAAGCCGTCCATGCCGACTACTATTACGCAGAAAAATCCCATGCCGAGAGAGCCATGTTG
ATTGGCCATACAGGTCAGTTTTATTCTAGCTTCTTCCGTTACCTGCATTCACCTCCCTGA
Gene >Pro_DTO377G3_2|g8762.t1
ATGGACGCAGAGGACCTGAAGAAAGAACATCGAAATAGTATGTCGCCCACGCAGCCAATCCTCGACATTAGTTAC
AATGACCGAGAGCCTGGCCACCACGAAGTGGAATCCCAACAACACTCACCATATCGCCCCGCCTCCTGGGCACGG
AGAGCCCTGGTGATGCATGGATTGATAATCCTCTTCTATATCGGCCTTGCCGTTTCGTCGTGGACAAATATTCTA
TTGGGGGAATGTCCTGGTCGGAGTTCAATCTAAATTGTTTAGTGAGTGCCTAATCCATGGTGAAGGGTTGTCAGA
GAACCGGAAGTGTCTAATAGCAACCAATTTTAGCACCTGTCCATGAGCACATCAATATCGAAGTCACAGTCATTT
ACGACAAGCCCAGCGATATCAAGGCTAGTTCATATGTGGGAGAGCCTAGTCTAGTGGTTGATGAGGCCTGGTATC
GACTCTTGCGTCGTAAGTCATCCTGGTACACTTTATATTGAGATTGTCCAACGTATTTTCTTCTAGATCACAACA
TACGCATTATGGAAGATGAGCTGCAAGCAATGAACCAAACCTCTATTCCCCTCCGTCATGGGGGTGGATATCAAG
GAATGATGGCCGTCTTCCACGAACTACATTGCTTGGTATGTTCTTTCTTTCCCATTGTACATTCACAATTGACTG
AGCACGTCGGATACAGAAACTCGTTCGTGAAGCCGTCCATGCCGACTACTATTACGCAGAAAAATCCCATGCCGA
GAGAGCCATGTTGATTGGCCATACAGGTCAGTTTTATTCTAGCTTCTTCCGTTACCTGCATTCACCTCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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