© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8760.t1 |
| Gene name | |
| Location | scaffold_36:227183..228399 |
| Strand | + |
| Gene length (bp) | 1216 |
| Transcript length (bp) | 1035 |
| Coding sequence length (bp) | 1035 |
| Protein length (aa) | 345 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 4.1E-26 | 126 | 334 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 160 | 182 | 22 |
| 2 | 243 | 261 | 18 |
| 3 | 276 | 298 | 22 |
| 4 | 319 | 341 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8760.t1 MPVSCLEQLLQTEYWVFEQPGSGIRAIRSHEWSLPADLMDVVDVITPTNVFIHPTVQFRLGAPTPIWEEESHLPM YQDLIDEDLLDRGRLEILTQEELSANPTGDWCHRATHGAVSGDVSLYQRLNLLGGALANIGANKACELMGDFRVG FLLQTPPRLQYFAQLIGTLFATIVAPVIFKLFTTAYPCIIAEGANGNSTDAAAAQGRRCEFSGPSIATWRAVAVA TTSGASGQSAIPEASGRFAVLFAAVGVMIVLLRNMLRAFPAKVYLPNMMMMGLAFTMPSPPYGIAMLMGALGARM WKWREERTFETYSSSVAAGLVAGEGIGGIVNGVLTIAVGWGGDG* |
| Coding | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGTGCGACCCACGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTG AATCTACTAGGTGGTGCATTAGCCAACATCGGTGCCAACAAAGCCTGTGAACTAATGGGTGACTTTCGCGTGGGC TTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACTCATCGGAACACTATTCGCCACAATTGTCGCC CCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCATTGCTGAGGGCGCAAATGGTAACAGTACCGAT GCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTCCATCGCGACATGGCGCGCGGTGGCTGTCGCA ACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAGCGGGCGATTCGCTGTGTTGTTCGCAGCCGTC GGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCCAGCTAAGGTATATTTGCCTAATATGATGATG ATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGCGATGTTGATGGGGGCACTGGGGGCACGCATG TGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATCAGTGGCAGCGGGGTTAGTGGCTGGGGAGGGG ATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTGGGGAGGAGATGGCTGA |
| Transcript | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGTGCGACCCACGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTG AATCTACTAGGTGGTGCATTAGCCAACATCGGTGCCAACAAAGCCTGTGAACTAATGGGTGACTTTCGCGTGGGC TTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACTCATCGGAACACTATTCGCCACAATTGTCGCC CCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCATTGCTGAGGGCGCAAATGGTAACAGTACCGAT GCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTCCATCGCGACATGGCGCGCGGTGGCTGTCGCA ACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAGCGGGCGATTCGCTGTGTTGTTCGCAGCCGTC GGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCCAGCTAAGGTATATTTGCCTAATATGATGATG ATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGCGATGTTGATGGGGGCACTGGGGGCACGCATG TGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATCAGTGGCAGCGGGGTTAGTGGCTGGGGAGGGG ATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTGGGGAGGAGATGGCTGA |
| Gene | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGGTAAATCATCACCATATCTTTATGAAATCTAATTTGCGCACCCTAAGAT ACAATGTTTGGATTCAGATACCACACCTTTAACCGCAGTCGCAACCGTTTCGCAAATTGTCCTCAGTGCGACCCA CGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTGAATCTACTAGGTGGTGCATTAGCCAACATCGGTGC CAACAAAGCCTGTGGTACGTGTGTTATCTATCTCCTTCTTTTTCTCACTCCCCGGGTATAGGAGCTAATATTTCC GACAGAACTAATGGGTGACTTTCGCGTGGGCTTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACT CATCGGAACACTATTCGCCACAATTGTCGCCCCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCAT TGCTGAGGGCGCAAATGGTAACAGTACCGATGCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTC CATCGCGACATGGCGCGCGGTGGCTGTCGCAACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAG CGGGCGATTCGCTGTGTTGTTCGCAGCCGTCGGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCC AGCTAAGGTATATTTGCCTAATATGATGATGATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGC GATGTTGATGGGGGCACTGGGGGCACGCATGTGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATC AGTGGCAGCGGGGTTAGTGGCTGGGGAGGGGATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTG GGGAGGAGATGGCTGA |