Protein ID | Pro_DTO377G3_2|g8760.t1 |
Gene name | |
Location | scaffold_36:227183..228399 |
Strand | + |
Gene length (bp) | 1216 |
Transcript length (bp) | 1035 |
Coding sequence length (bp) | 1035 |
Protein length (aa) | 345 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03169 | OPT | OPT oligopeptide transporter protein | 3.7E-26 | 126 | 334 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0006810 | transport | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 160 | 182 | 22 |
2 | 243 | 261 | 18 |
3 | 276 | 298 | 22 |
4 | 319 | 341 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8760.t1 MPVSCLEQLLQTEYWVFEQPGSGIRAIRSHEWSLPADLMDVVDVITPTNVFIHPTVQFRLGAPTPIWEEESHLPM YQDLIDEDLLDRGRLEILTQEELSANPTGDWCHRATHGAVSGDVSLYQRLNLLGGALANIGANKACELMGDFRVG FLLQTPPRLQYFAQLIGTLFATIVAPVIFKLFTTAYPCIIAEGANGNSTDAAAAQGRRCEFSGPSIATWRAVAVA TTSGASGQSAIPEASGRFAVLFAAVGVMIVLLRNMLRAFPAKVYLPNMMMMGLAFTMPSPPYGIAMLMGALGARM WKWREERTFETYSSSVAAGLVAGEGIGGIVNGVLTIAVGWGGDG* |
Coding | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGTGCGACCCACGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTG AATCTACTAGGTGGTGCATTAGCCAACATCGGTGCCAACAAAGCCTGTGAACTAATGGGTGACTTTCGCGTGGGC TTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACTCATCGGAACACTATTCGCCACAATTGTCGCC CCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCATTGCTGAGGGCGCAAATGGTAACAGTACCGAT GCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTCCATCGCGACATGGCGCGCGGTGGCTGTCGCA ACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAGCGGGCGATTCGCTGTGTTGTTCGCAGCCGTC GGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCCAGCTAAGGTATATTTGCCTAATATGATGATG ATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGCGATGTTGATGGGGGCACTGGGGGCACGCATG TGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATCAGTGGCAGCGGGGTTAGTGGCTGGGGAGGGG ATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTGGGGAGGAGATGGCTGA |
Transcript | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGTGCGACCCACGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTG AATCTACTAGGTGGTGCATTAGCCAACATCGGTGCCAACAAAGCCTGTGAACTAATGGGTGACTTTCGCGTGGGC TTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACTCATCGGAACACTATTCGCCACAATTGTCGCC CCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCATTGCTGAGGGCGCAAATGGTAACAGTACCGAT GCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTCCATCGCGACATGGCGCGCGGTGGCTGTCGCA ACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAGCGGGCGATTCGCTGTGTTGTTCGCAGCCGTC GGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCCAGCTAAGGTATATTTGCCTAATATGATGATG ATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGCGATGTTGATGGGGGCACTGGGGGCACGCATG TGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATCAGTGGCAGCGGGGTTAGTGGCTGGGGAGGGG ATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTGGGGAGGAGATGGCTGA |
Gene | >Pro_DTO377G3_2|g8760.t1 ATGCCTGTCTCGTGTCTTGAGCAGCTACTCCAAACCGAATACTGGGTCTTCGAGCAGCCGGGGTCTGGGATTCGA GCAATTCGCTCACACGAATGGTCTCTACCTGCTGACTTGATGGATGTGGTCGATGTGATTACACCGACCAACGTT TTTATCCACCCGACCGTCCAATTTCGATTGGGCGCACCTACTCCAATCTGGGAAGAGGAAAGTCATCTGCCGATG TATCAAGACCTCATCGATGAAGATCTATTAGATCGTGGCAGACTGGAGATTCTGACCCAGGAGGAACTATCCGCG AATCCCACAGGCGACTGGTGCCACCGGTAAATCATCACCATATCTTTATGAAATCTAATTTGCGCACCCTAAGAT ACAATGTTTGGATTCAGATACCACACCTTTAACCGCAGTCGCAACCGTTTCGCAAATTGTCCTCAGTGCGACCCA CGGTGCCGTCAGCGGTGATGTGTCTCTCTACCAACGACTGAATCTACTAGGTGGTGCATTAGCCAACATCGGTGC CAACAAAGCCTGTGGTACGTGTGTTATCTATCTCCTTCTTTTTCTCACTCCCCGGGTATAGGAGCTAATATTTCC GACAGAACTAATGGGTGACTTTCGCGTGGGCTTTCTTCTGCAAACCCCACCACGGCTCCAATACTTTGCTCAACT CATCGGAACACTATTCGCCACAATTGTCGCCCCGGTCATCTTCAAACTCTTCACTACCGCTTACCCATGTATCAT TGCTGAGGGCGCAAATGGTAACAGTACCGATGCCGCCGCCGCTCAAGGCCGCCGCTGTGAATTCAGCGGACCCTC CATCGCGACATGGCGCGCGGTGGCTGTCGCAACAACCTCTGGAGCCTCTGGGCAGTCGGCTATTCCAGAAGCGAG CGGGCGATTCGCTGTGTTGTTCGCAGCCGTCGGCGTGATGATTGTGTTACTGCGGAATATGCTAAGAGCTTTCCC AGCTAAGGTATATTTGCCTAATATGATGATGATGGGGTTGGCTTTTACGATGCCTTCGCCGCCGTATGGAATTGC GATGTTGATGGGGGCACTGGGGGCACGCATGTGGAAGTGGAGGGAGGAGAGGACGTTTGAGACGTATTCGTCATC AGTGGCAGCGGGGTTAGTGGCTGGGGAGGGGATTGGGGGTATAGTGAATGGAGTTCTGACGATTGCGGTGGGCTG GGGAGGAGATGGCTGA |