Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8758.t1
Gene name
Locationscaffold_36:223945..224463
Strand+
Gene length (bp)518
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00355 Rieske Rieske [2Fe-2S] domain 1.3E-09 49 119

GO

GO Term Description Terminal node
GO:0051537 2 iron, 2 sulfur cluster binding Yes
GO:0005488 binding No
GO:0051540 metal cluster binding No
GO:0051536 iron-sulfur cluster binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8758.t1
MNPFKRATAAWHPVGLASEFPSIDDDARIVPRCKAFNIPKTNDAIERVEDIDLPGELKDQVLVFKYKGKYHAIDH
QCPHSSFPLSQGHLFDIEDFGIVLSAGLTCPKHGWSFDLFSGRADRGNYTLKVWEVQLRDSSALGSTDQEVWVRR
KQRIG*
Coding >Pro_DTO377G3_2|g8758.t1
ATGAATCCCTTCAAACGGGCAACCGCAGCCTGGCATCCTGTTGGTCTTGCATCCGAGTTTCCGAGCATCGATGAC
GATGCCCGGATTGTGCCAAGATGCAAAGCTTTCAATATTCCCAAGACAAACGACGCCATAGAGCGAGTTGAAGAC
ATTGACCTACCAGGAGAACTGAAGGACCAAGTCCTGGTGTTCAAATACAAGGGCAAATACCATGCCATTGATCAT
CAATGCCCCCACTCGTCGTTCCCACTTTCACAAGGCCACCTCTTTGATATTGAAGACTTCGGCATCGTGCTCAGC
GCAGGTCTCACATGTCCCAAGCATGGCTGGTCATTTGATTTATTCTCTGGGCGTGCTGATCGCGGCAACTACACA
CTCAAGGTGTGGGAGGTACAGCTGCGCGACTCATCGGCACTTGGAAGTACGGACCAAGAGGTTTGGGTGAGGCGG
AAACAAAGAATTGGTTAA
Transcript >Pro_DTO377G3_2|g8758.t1
ATGAATCCCTTCAAACGGGCAACCGCAGCCTGGCATCCTGTTGGTCTTGCATCCGAGTTTCCGAGCATCGATGAC
GATGCCCGGATTGTGCCAAGATGCAAAGCTTTCAATATTCCCAAGACAAACGACGCCATAGAGCGAGTTGAAGAC
ATTGACCTACCAGGAGAACTGAAGGACCAAGTCCTGGTGTTCAAATACAAGGGCAAATACCATGCCATTGATCAT
CAATGCCCCCACTCGTCGTTCCCACTTTCACAAGGCCACCTCTTTGATATTGAAGACTTCGGCATCGTGCTCAGC
GCAGGTCTCACATGTCCCAAGCATGGCTGGTCATTTGATTTATTCTCTGGGCGTGCTGATCGCGGCAACTACACA
CTCAAGGTGTGGGAGGTACAGCTGCGCGACTCATCGGCACTTGGAAGTACGGACCAAGAGGTTTGGGTGAGGCGG
AAACAAAGAATTGGTTAA
Gene >Pro_DTO377G3_2|g8758.t1
ATGAATCCCTTCAAACGGGCAACCGCAGCCTGGCATCCTGTTGGTCTTGCATCCGAGTTTCCGAGCATCGATGAC
GATGCCCGGATTGTGCCAAGATGCAAAGCTTTCAATATTCCCAAGACAAACGACGCCATAGAGCGAGTTGAAGAC
ATTGACCTACCAGGAGAACTGAAGGACCAAGTCCTGGTGTTCAAATACAAGGGCAAATACCATGCCATTGATCAT
GTAAGTCAAACGGTTTTTCCAATTGGAAGCATTGAGCTCACCCATTCTAGCAATGCCCCCACTCGTCGTTCCCAC
TTTCACAAGGCCACCTCTTTGATATTGAAGACTTCGGCATCGTGCTCAGCGCAGGTCTCACATGTCCCAAGCATG
GCTGGTCATTTGATTTATTCTCTGGGCGTGCTGATCGCGGCAACTACACACTCAAGGTGTGGGAGGTACAGCTGC
GCGACTCATCGGCACTTGGAAGTACGGACCAAGAGGTTTGGGTGAGGCGGAAACAAAGAATTGGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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