Protein ID | Pro_DTO377G3_2|g8752.t1 |
Gene name | |
Location | scaffold_36:210165..213029 |
Strand | + |
Gene length (bp) | 2864 |
Transcript length (bp) | 2805 |
Coding sequence length (bp) | 2805 |
Protein length (aa) | 935 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00924 | MS_channel | Mechanosensitive ion channel | 5.3E-25 | 500 | 688 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0008150 | biological_process | No |
GO:0006810 | transport | No |
GO:0009987 | cellular process | No |
GO:0051234 | establishment of localization | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 153 | 175 | 22 |
2 | 185 | 207 | 22 |
3 | 241 | 260 | 19 |
4 | 282 | 304 | 22 |
5 | 504 | 526 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8752.t1 MSSPVEERKAHIEDKDKRKHSDVSPPSNDGTYVTEPDADRDTGHLKVDTTHYEHDDDGHPPMRTPSARREQATRL EDDLLVLQAERMTSHSTGAPDDEHDRNSIHRTRSRRSEAVDEFDEATNPLHEKAAIYKPPENPNTQFAVFVKKLH QSSFLVRYLTYIAPIVLILLIPLLVGALRFPNASVGGVQLLWFSIWLEIVWLTLWAGRVAGKCLPPAVGLFASVF TNNAKKWRDMAKQLEFHAALFFWWLGVEISFLPTMKNHHVDGDTGTKGWEITLNKIIIVIFVWTILNFIEKILIQ LIAISFHMRTYADRIEINKFQIGSLSKLYDWSRSTLTEKDEAFEEKDDEPSSTGVKNPLHYAGLAHRKAKGALNK VGNRVGDVAGAVVADVTGRATTRSTDAYQVILALLRTTGGCQVLARRLYRTFVRDGFETVFGGDLKAAFEDGEEA EAAFAMFDRDMNGDISMEELEAVCVDIGRERKSITASLKDLDSVVSKLDNVFMFFVFVIVLIVFLSLISTSAAGV LTSAGSAILALSWLFSATAQEFLQSVVFVFVKHPFDVGDRVTIYGNAGDSGLGDDYFVKEITLLYTEFKKMQGHV VQAPNSYLNGLFILNQRRSGALAEAVPIIIKYGTSIDQLDSLRQRLLEFVRSEKRDFQSNILTEMRAVTENFSLT LNIVFFYKSNWQNEGLRLQRRNKFICMLMVALQEIGIEGPRMNLQGAKFDIPFHVNYGNTRSAEQQAPIDADPVP ISEESHHLPENTGSSSGSAIRHPSILRKGMNTANARARGPSVSQHKHVDFSLGMSNMASNDIMGDVFEDRGVVVG EVVRSANRDAADRRIQEENEDEEERKSRTSSSRHRRPSNMSAPSNHDDGRRSTDAHSFRSGQSSLSRNRFFQHRS SVGHDRDDLMEQGRVDEPTPPPPATVPGAKEHPY* |
Coding | >Pro_DTO377G3_2|g8752.t1 ATGTCGTCCCCCGTGGAGGAACGAAAAGCCCATATCGAAGACAAGGACAAGCGAAAACACTCGGACGTCTCTCCT CCCTCCAATGATGGCACTTATGTGACCGAGCCTGACGCTGATCGCGACACGGGTCACTTGAAGGTCGACACTACA CATTATGAGCATGATGATGATGGGCATCCGCCAATGCGCACCCCATCCGCCCGTCGGGAGCAGGCCACTCGTCTG GAGGATGATTTGCTGGTCCTGCAGGCCGAGCGTATGACCTCGCATTCGACCGGCGCACCAGACGACGAACACGAT CGCAATTCTATCCATCGCACCCGTTCGCGACGCTCCGAAGCCGTCGATGAGTTTGATGAAGCTACAAATCCCCTG CACGAAAAGGCCGCAATTTACAAACCCCCGGAGAATCCAAACACCCAGTTTGCCGTCTTTGTGAAGAAACTCCAT CAGTCGAGTTTCCTCGTGCGCTACTTGACCTACATTGCCCCCATTGTCCTCATTCTCTTGATCCCGTTGCTGGTC GGCGCTCTCAGGTTTCCCAATGCCAGTGTCGGCGGTGTACAATTGCTGTGGTTTTCAATCTGGTTGGAAATTGTC TGGTTGACTCTCTGGGCAGGACGGGTGGCTGGCAAGTGCTTGCCTCCAGCTGTCGGTCTTTTTGCGAGTGTCTTT ACCAACAACGCCAAGAAATGGCGCGACATGGCGAAACAGCTCGAGTTTCACGCGGCGCTCTTTTTCTGGTGGCTT GGCGTGGAGATCTCTTTCCTGCCAACGATGAAAAACCACCATGTGGATGGTGATACGGGGACCAAGGGATGGGAA ATCACTCTTAACAAAATCATCATTGTCATCTTCGTGTGGACTATCCTGAATTTCATCGAAAAGATCCTCATCCAG TTGATTGCCATCAGCTTCCATATGCGGACCTATGCGGACCGCATTGAGATCAACAAATTCCAGATTGGCAGTCTG TCCAAGCTGTACGATTGGTCTCGGTCCACTCTTACTGAGAAAGATGAAGCATTTGAGGAGAAGGACGACGAACCG AGTTCCACGGGAGTCAAGAACCCGTTGCACTATGCTGGCCTGGCCCACCGGAAGGCCAAGGGTGCCCTGAACAAA GTTGGAAACCGGGTTGGCGATGTCGCAGGCGCGGTCGTCGCTGACGTCACTGGACGCGCGACGACTCGCAGCACC GATGCCTATCAGGTCATTTTGGCGCTCCTGCGAACTACCGGAGGCTGTCAGGTCTTGGCGCGTCGTCTGTATCGC ACCTTTGTGAGGGATGGCTTTGAGACCGTTTTTGGTGGTGACTTGAAAGCCGCATTTGAGGACGGCGAGGAAGCC GAAGCTGCCTTCGCTATGTTTGATCGCGACATGAATGGTGATATTTCCATGGAGGAGCTGGAGGCCGTTTGCGTT GACATTGGCCGTGAGCGCAAGTCCATTACTGCATCTCTCAAGGATTTGGATTCGGTTGTCTCGAAATTGGACAAT GTCTTCATGTTCTTCGTGTTTGTGATTGTGCTGATTGTATTTTTGTCGCTCATCTCCACCTCAGCCGCCGGTGTG CTCACATCCGCGGGCTCTGCTATTCTCGCACTGTCCTGGTTGTTCTCTGCTACTGCCCAAGAGTTCCTCCAGTCA GTTGTCTTCGTCTTTGTCAAGCACCCCTTCGATGTTGGTGACCGTGTGACCATCTACGGTAACGCTGGAGATTCC GGTCTTGGTGATGATTACTTTGTGAAGGAGATTACTCTTCTGTACACCGAGTTCAAGAAGATGCAAGGCCATGTC GTGCAGGCCCCAAATAGCTACCTCAATGGCCTTTTCATCCTCAATCAGCGCCGTTCGGGCGCACTTGCCGAGGCG GTTCCAATCATTATCAAGTATGGCACCAGCATCGACCAACTCGACTCCCTGCGCCAGCGCCTGTTGGAGTTTGTG CGTAGCGAGAAACGCGACTTCCAGAGCAACATCCTCACCGAAATGCGTGCCGTCACCGAGAACTTTTCGCTCACA CTCAACATCGTCTTCTTCTACAAGTCCAACTGGCAGAACGAGGGCCTACGTTTGCAGCGCCGCAACAAGTTCATA TGTATGCTCATGGTCGCCCTCCAGGAAATCGGCATCGAGGGCCCACGCATGAACCTCCAAGGTGCCAAGTTCGAC ATTCCGTTCCACGTCAACTATGGCAATACACGCTCTGCCGAGCAGCAAGCCCCTATCGATGCCGACCCAGTCCCC ATCTCAGAAGAATCTCACCACCTGCCAGAGAATACCGGATCCAGCAGCGGCAGCGCTATCCGTCACCCATCGATT CTTCGCAAGGGTATGAACACTGCCAATGCCCGTGCACGCGGCCCGTCTGTCTCACAGCACAAACACGTCGACTTC TCCTTGGGCATGTCCAACATGGCATCCAACGATATTATGGGAGATGTGTTTGAGGATCGGGGTGTGGTCGTCGGT GAAGTCGTCCGGTCGGCCAACCGCGATGCTGCAGACCGCCGCATCCAGGAAGAGAACGAGGACGAGGAGGAGCGC AAGAGCCGTACATCTTCTTCCCGGCATCGTCGCCCCTCCAACATGAGCGCTCCCTCCAATCATGATGACGGTCGC CGGTCGACCGACGCTCACAGCTTCCGTAGTGGCCAGTCATCGCTCAGCCGTAACCGGTTCTTCCAACACCGCAGC AGCGTAGGTCACGATCGCGATGACTTGATGGAGCAAGGCCGCGTCGATGAGCCTACTCCTCCGCCACCGGCCACA GTCCCTGGTGCCAAGGAGCACCCATATTGA |
Transcript | >Pro_DTO377G3_2|g8752.t1 ATGTCGTCCCCCGTGGAGGAACGAAAAGCCCATATCGAAGACAAGGACAAGCGAAAACACTCGGACGTCTCTCCT CCCTCCAATGATGGCACTTATGTGACCGAGCCTGACGCTGATCGCGACACGGGTCACTTGAAGGTCGACACTACA CATTATGAGCATGATGATGATGGGCATCCGCCAATGCGCACCCCATCCGCCCGTCGGGAGCAGGCCACTCGTCTG GAGGATGATTTGCTGGTCCTGCAGGCCGAGCGTATGACCTCGCATTCGACCGGCGCACCAGACGACGAACACGAT CGCAATTCTATCCATCGCACCCGTTCGCGACGCTCCGAAGCCGTCGATGAGTTTGATGAAGCTACAAATCCCCTG CACGAAAAGGCCGCAATTTACAAACCCCCGGAGAATCCAAACACCCAGTTTGCCGTCTTTGTGAAGAAACTCCAT CAGTCGAGTTTCCTCGTGCGCTACTTGACCTACATTGCCCCCATTGTCCTCATTCTCTTGATCCCGTTGCTGGTC GGCGCTCTCAGGTTTCCCAATGCCAGTGTCGGCGGTGTACAATTGCTGTGGTTTTCAATCTGGTTGGAAATTGTC TGGTTGACTCTCTGGGCAGGACGGGTGGCTGGCAAGTGCTTGCCTCCAGCTGTCGGTCTTTTTGCGAGTGTCTTT ACCAACAACGCCAAGAAATGGCGCGACATGGCGAAACAGCTCGAGTTTCACGCGGCGCTCTTTTTCTGGTGGCTT GGCGTGGAGATCTCTTTCCTGCCAACGATGAAAAACCACCATGTGGATGGTGATACGGGGACCAAGGGATGGGAA ATCACTCTTAACAAAATCATCATTGTCATCTTCGTGTGGACTATCCTGAATTTCATCGAAAAGATCCTCATCCAG TTGATTGCCATCAGCTTCCATATGCGGACCTATGCGGACCGCATTGAGATCAACAAATTCCAGATTGGCAGTCTG TCCAAGCTGTACGATTGGTCTCGGTCCACTCTTACTGAGAAAGATGAAGCATTTGAGGAGAAGGACGACGAACCG AGTTCCACGGGAGTCAAGAACCCGTTGCACTATGCTGGCCTGGCCCACCGGAAGGCCAAGGGTGCCCTGAACAAA GTTGGAAACCGGGTTGGCGATGTCGCAGGCGCGGTCGTCGCTGACGTCACTGGACGCGCGACGACTCGCAGCACC GATGCCTATCAGGTCATTTTGGCGCTCCTGCGAACTACCGGAGGCTGTCAGGTCTTGGCGCGTCGTCTGTATCGC ACCTTTGTGAGGGATGGCTTTGAGACCGTTTTTGGTGGTGACTTGAAAGCCGCATTTGAGGACGGCGAGGAAGCC GAAGCTGCCTTCGCTATGTTTGATCGCGACATGAATGGTGATATTTCCATGGAGGAGCTGGAGGCCGTTTGCGTT GACATTGGCCGTGAGCGCAAGTCCATTACTGCATCTCTCAAGGATTTGGATTCGGTTGTCTCGAAATTGGACAAT GTCTTCATGTTCTTCGTGTTTGTGATTGTGCTGATTGTATTTTTGTCGCTCATCTCCACCTCAGCCGCCGGTGTG CTCACATCCGCGGGCTCTGCTATTCTCGCACTGTCCTGGTTGTTCTCTGCTACTGCCCAAGAGTTCCTCCAGTCA GTTGTCTTCGTCTTTGTCAAGCACCCCTTCGATGTTGGTGACCGTGTGACCATCTACGGTAACGCTGGAGATTCC GGTCTTGGTGATGATTACTTTGTGAAGGAGATTACTCTTCTGTACACCGAGTTCAAGAAGATGCAAGGCCATGTC GTGCAGGCCCCAAATAGCTACCTCAATGGCCTTTTCATCCTCAATCAGCGCCGTTCGGGCGCACTTGCCGAGGCG GTTCCAATCATTATCAAGTATGGCACCAGCATCGACCAACTCGACTCCCTGCGCCAGCGCCTGTTGGAGTTTGTG CGTAGCGAGAAACGCGACTTCCAGAGCAACATCCTCACCGAAATGCGTGCCGTCACCGAGAACTTTTCGCTCACA CTCAACATCGTCTTCTTCTACAAGTCCAACTGGCAGAACGAGGGCCTACGTTTGCAGCGCCGCAACAAGTTCATA TGTATGCTCATGGTCGCCCTCCAGGAAATCGGCATCGAGGGCCCACGCATGAACCTCCAAGGTGCCAAGTTCGAC ATTCCGTTCCACGTCAACTATGGCAATACACGCTCTGCCGAGCAGCAAGCCCCTATCGATGCCGACCCAGTCCCC ATCTCAGAAGAATCTCACCACCTGCCAGAGAATACCGGATCCAGCAGCGGCAGCGCTATCCGTCACCCATCGATT CTTCGCAAGGGTATGAACACTGCCAATGCCCGTGCACGCGGCCCGTCTGTCTCACAGCACAAACACGTCGACTTC TCCTTGGGCATGTCCAACATGGCATCCAACGATATTATGGGAGATGTGTTTGAGGATCGGGGTGTGGTCGTCGGT GAAGTCGTCCGGTCGGCCAACCGCGATGCTGCAGACCGCCGCATCCAGGAAGAGAACGAGGACGAGGAGGAGCGC AAGAGCCGTACATCTTCTTCCCGGCATCGTCGCCCCTCCAACATGAGCGCTCCCTCCAATCATGATGACGGTCGC CGGTCGACCGACGCTCACAGCTTCCGTAGTGGCCAGTCATCGCTCAGCCGTAACCGGTTCTTCCAACACCGCAGC AGCGTAGGTCACGATCGCGATGACTTGATGGAGCAAGGCCGCGTCGATGAGCCTACTCCTCCGCCACCGGCCACA GTCCCTGGTGCCAAGGAGCACCCATATTGA |
Gene | >Pro_DTO377G3_2|g8752.t1 ATGTCGTCCCCCGTGGAGGAACGAAAAGCCCATATCGAAGACAAGGACAAGCGAAAACACTCGGACGTCTCTCCT CCCTCCAATGATGGCACTTATGTGACCGAGCCTGACGCTGATCGCGACACGGGTCACTTGAAGGTCGACACTACA CATTATGAGCATGATGATGATGGGCATCCGCCAATGCGCACCCCATCCGCCCGTCGGGAGCAGGCCACTCGTCTG GAGGATGATTTGCTGGTCCTGCAGGCCGAGCGTATGACCTCGCATTCGACCGGCGCACCAGACGACGAACACGAT CGCAATTCTATCCATCGCACCCGTTCGCGACGCTCCGAAGCCGTCGATGAGTTTGATGAAGCTACAAATCCCCTG CACGAAAAGGCCGCAATTTACAAACCCCCGGAGAATCCAAACACCCAGTTTGCCGTCTTTGTGAAGAAACTCCAT CAGTCGAGTTTCCTCGTGCGCTACTTGACCTACATTGCCCCCATTGTCCTCATTCTCTTGATCCCGTTGCTGGTC GGCGCTCTCAGGTTTCCCAATGCCAGTGTCGGCGGTGTACAATTGCTGTGGTTTTCAATCTGGTTGGAAATTGTC TGGTTGACTCTCTGGGCAGGACGGGTGAGTCCAATCAATGAATCATTTCCCAACGAGCATTACTGATCTATTTCC TTTCTTAGGTGGCTGGCAAGTGCTTGCCTCCAGCTGTCGGTCTTTTTGCGAGTGTCTTTACCAACAACGCCAAGA AATGGCGCGACATGGCGAAACAGCTCGAGTTTCACGCGGCGCTCTTTTTCTGGTGGCTTGGCGTGGAGATCTCTT TCCTGCCAACGATGAAAAACCACCATGTGGATGGTGATACGGGGACCAAGGGATGGGAAATCACTCTTAACAAAA TCATCATTGTCATCTTCGTGTGGACTATCCTGAATTTCATCGAAAAGATCCTCATCCAGTTGATTGCCATCAGCT TCCATATGCGGACCTATGCGGACCGCATTGAGATCAACAAATTCCAGATTGGCAGTCTGTCCAAGCTGTACGATT GGTCTCGGTCCACTCTTACTGAGAAAGATGAAGCATTTGAGGAGAAGGACGACGAACCGAGTTCCACGGGAGTCA AGAACCCGTTGCACTATGCTGGCCTGGCCCACCGGAAGGCCAAGGGTGCCCTGAACAAAGTTGGAAACCGGGTTG GCGATGTCGCAGGCGCGGTCGTCGCTGACGTCACTGGACGCGCGACGACTCGCAGCACCGATGCCTATCAGGTCA TTTTGGCGCTCCTGCGAACTACCGGAGGCTGTCAGGTCTTGGCGCGTCGTCTGTATCGCACCTTTGTGAGGGATG GCTTTGAGACCGTTTTTGGTGGTGACTTGAAAGCCGCATTTGAGGACGGCGAGGAAGCCGAAGCTGCCTTCGCTA TGTTTGATCGCGACATGAATGGTGATATTTCCATGGAGGAGCTGGAGGCCGTTTGCGTTGACATTGGCCGTGAGC GCAAGTCCATTACTGCATCTCTCAAGGATTTGGATTCGGTTGTCTCGAAATTGGACAATGTCTTCATGTTCTTCG TGTTTGTGATTGTGCTGATTGTATTTTTGTCGCTCATCTCCACCTCAGCCGCCGGTGTGCTCACATCCGCGGGCT CTGCTATTCTCGCACTGTCCTGGTTGTTCTCTGCTACTGCCCAAGAGTTCCTCCAGTCAGTTGTCTTCGTCTTTG TCAAGCACCCCTTCGATGTTGGTGACCGTGTGACCATCTACGGTAACGCTGGAGATTCCGGTCTTGGTGATGATT ACTTTGTGAAGGAGATTACTCTTCTGTACACCGAGTTCAAGAAGATGCAAGGCCATGTCGTGCAGGCCCCAAATA GCTACCTCAATGGCCTTTTCATCCTCAATCAGCGCCGTTCGGGCGCACTTGCCGAGGCGGTTCCAATCATTATCA AGTATGGCACCAGCATCGACCAACTCGACTCCCTGCGCCAGCGCCTGTTGGAGTTTGTGCGTAGCGAGAAACGCG ACTTCCAGAGCAACATCCTCACCGAAATGCGTGCCGTCACCGAGAACTTTTCGCTCACACTCAACATCGTCTTCT TCTACAAGTCCAACTGGCAGAACGAGGGCCTACGTTTGCAGCGCCGCAACAAGTTCATATGTATGCTCATGGTCG CCCTCCAGGAAATCGGCATCGAGGGCCCACGCATGAACCTCCAAGGTGCCAAGTTCGACATTCCGTTCCACGTCA ACTATGGCAATACACGCTCTGCCGAGCAGCAAGCCCCTATCGATGCCGACCCAGTCCCCATCTCAGAAGAATCTC ACCACCTGCCAGAGAATACCGGATCCAGCAGCGGCAGCGCTATCCGTCACCCATCGATTCTTCGCAAGGGTATGA ACACTGCCAATGCCCGTGCACGCGGCCCGTCTGTCTCACAGCACAAACACGTCGACTTCTCCTTGGGCATGTCCA ACATGGCATCCAACGATATTATGGGAGATGTGTTTGAGGATCGGGGTGTGGTCGTCGGTGAAGTCGTCCGGTCGG CCAACCGCGATGCTGCAGACCGCCGCATCCAGGAAGAGAACGAGGACGAGGAGGAGCGCAAGAGCCGTACATCTT CTTCCCGGCATCGTCGCCCCTCCAACATGAGCGCTCCCTCCAATCATGATGACGGTCGCCGGTCGACCGACGCTC ACAGCTTCCGTAGTGGCCAGTCATCGCTCAGCCGTAACCGGTTCTTCCAACACCGCAGCAGCGTAGGTCACGATC GCGATGACTTGATGGAGCAAGGCCGCGTCGATGAGCCTACTCCTCCGCCACCGGCCACAGTCCCTGGTGCCAAGG AGCACCCATATTGA |