© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g8733.t1 |
| Gene name | |
| Location | scaffold_36:156226..158210 |
| Strand | - |
| Gene length (bp) | 1984 |
| Transcript length (bp) | 1653 |
| Coding sequence length (bp) | 1653 |
| Protein length (aa) | 551 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.3E-44 | 58 | 457 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 8.8E-12 | 53 | 222 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 65 | 22 |
| 2 | 117 | 139 | 22 |
| 3 | 143 | 162 | 19 |
| 4 | 181 | 203 | 22 |
| 5 | 207 | 229 | 22 |
| 6 | 242 | 264 | 22 |
| 7 | 274 | 296 | 22 |
| 8 | 315 | 337 | 22 |
| 9 | 352 | 374 | 22 |
| 10 | 381 | 403 | 22 |
| 11 | 413 | 435 | 22 |
| 12 | 517 | 539 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8733.t1 MALNPNESASAGVMPHENEVERSSAQESEEQPLLRSDPVPATWSPPPGFLLIQIAIMANVFLGGFDGTITASTYA VISSEFNAANTASWLTTSYLITSTAFQPLYGRFSDILGRRSCFFTATITFMAGCLGCAVAHDVIFLNIMRALTGI GGGGLMTMATIINSDIIPFRQRGMYQAIQNVSYGFGAICGASFGGAIVDSIGWRWCFLLQVPVSLFALVMGYVVL KFPTRHTESSPGRTRGIWHQIDVLGACLLILALSVQLVGLSLGGNILPWTHLWVILPLVSSVVLLAAFVAVEAKT TAAPLIPLKMLRGQLAVSTQIANVCVGMAAYAYLFTLPLMFQVILLDSPSKAGTRLVIPCLFTPLGGLIAGIIMS RWGRLSSIVRVGAALMLFGNVLVMLLRFNDSGWKYLVYVIPANLGQGMVYPGILFTFLAAFDHADHAVSASTVYL IRSLGNVWGVAVTSTIMQNTLNSGLGEALSGIPDKWKVIDEIRHSVSAIYDLPPDVQLAARLVYYRGIRLSFMAS AIFAFIATVAAIFTRGKGLERAGGK* |
| Coding | >Pro_DTO377G3_2|g8733.t1 ATGGCATTGAATCCGAATGAAAGTGCTTCGGCCGGCGTGATGCCGCACGAGAATGAAGTCGAAAGATCGTCAGCA CAAGAAAGCGAAGAGCAACCTTTATTGCGATCGGATCCAGTTCCTGCAACTTGGAGCCCACCACCAGGGTTTCTA CTGATCCAAATCGCAATCATGGCCAATGTGTTTCTTGGCGGATTTGACGGCACCATCACTGCCTCAACCTATGCT GTTATCAGCTCCGAGTTCAACGCCGCGAACACTGCTTCGTGGCTAACTACCTCGTACTTGATCACAAGCACCGCA TTCCAGCCTCTTTATGGCCGATTCTCCGATATACTCGGTCGCCGGTCTTGTTTCTTCACTGCAACCATCACCTTC ATGGCTGGTTGTCTGGGATGTGCTGTGGCCCACGATGTAATCTTTCTAAACATCATGCGCGCCTTGACGGGCATT GGAGGCGGAGGATTGATGACTATGGCAACAATCATCAACTCCGATATCATTCCCTTCCGCCAACGCGGCATGTAC CAGGCAATCCAGAACGTCTCGTACGGCTTCGGAGCTATCTGTGGGGCTTCTTTTGGAGGTGCCATCGTTGACTCG ATCGGATGGCGCTGGTGCTTCCTGCTGCAGGTCCCAGTCTCTTTGTTCGCATTGGTCATGGGCTATGTAGTTCTA AAGTTCCCAACACGCCACACTGAATCCTCCCCCGGTCGAACCCGAGGAATTTGGCACCAAATCGATGTTCTGGGC GCTTGTCTGCTCATTCTGGCTCTATCGGTTCAGCTGGTCGGGCTCAGCCTGGGTGGTAACATTCTTCCTTGGACT CACCTGTGGGTAATTCTGCCATTGGTCTCTAGCGTGGTATTGCTGGCTGCATTTGTCGCTGTTGAAGCGAAAACC ACCGCTGCACCTCTGATTCCATTGAAGATGCTACGAGGACAGCTCGCTGTATCCACACAGATTGCCAACGTTTGT GTCGGGATGGCAGCATATGCATATCTATTTACTCTCCCTCTCATGTTCCAGGTGATCCTTCTTGACTCACCCAGC AAGGCTGGCACCCGACTGGTGATTCCCTGTCTATTCACCCCACTGGGTGGTCTTATAGCGGGAATCATCATGTCG CGCTGGGGCAGATTATCCTCCATTGTACGCGTCGGCGCAGCCCTAATGCTCTTCGGCAATGTGCTCGTCATGCTC CTCCGATTCAACGACTCGGGATGGAAGTATCTCGTCTATGTGATTCCCGCCAACCTGGGTCAGGGGATGGTGTAC CCAGGGATCCTGTTCACATTCCTAGCAGCCTTTGATCACGCCGATCACGCCGTCTCCGCCTCAACCGTCTACCTC ATCCGCTCCCTCGGGAATGTTTGGGGCGTCGCAGTGACCTCCACCATCATGCAGAATACACTTAACTCAGGCCTC GGTGAGGCCTTGAGTGGAATACCAGACAAATGGAAAGTGATCGATGAGATCCGCCACTCAGTCTCGGCTATTTAT GATCTTCCCCCGGATGTGCAATTAGCCGCTCGGCTGGTGTACTACCGCGGAATCAGACTCTCCTTCATGGCCTCC GCGATCTTTGCATTCATCGCGACCGTCGCTGCAATCTTCACTCGCGGAAAGGGTCTGGAGCGTGCGGGCGGCAAG TAA |
| Transcript | >Pro_DTO377G3_2|g8733.t1 ATGGCATTGAATCCGAATGAAAGTGCTTCGGCCGGCGTGATGCCGCACGAGAATGAAGTCGAAAGATCGTCAGCA CAAGAAAGCGAAGAGCAACCTTTATTGCGATCGGATCCAGTTCCTGCAACTTGGAGCCCACCACCAGGGTTTCTA CTGATCCAAATCGCAATCATGGCCAATGTGTTTCTTGGCGGATTTGACGGCACCATCACTGCCTCAACCTATGCT GTTATCAGCTCCGAGTTCAACGCCGCGAACACTGCTTCGTGGCTAACTACCTCGTACTTGATCACAAGCACCGCA TTCCAGCCTCTTTATGGCCGATTCTCCGATATACTCGGTCGCCGGTCTTGTTTCTTCACTGCAACCATCACCTTC ATGGCTGGTTGTCTGGGATGTGCTGTGGCCCACGATGTAATCTTTCTAAACATCATGCGCGCCTTGACGGGCATT GGAGGCGGAGGATTGATGACTATGGCAACAATCATCAACTCCGATATCATTCCCTTCCGCCAACGCGGCATGTAC CAGGCAATCCAGAACGTCTCGTACGGCTTCGGAGCTATCTGTGGGGCTTCTTTTGGAGGTGCCATCGTTGACTCG ATCGGATGGCGCTGGTGCTTCCTGCTGCAGGTCCCAGTCTCTTTGTTCGCATTGGTCATGGGCTATGTAGTTCTA AAGTTCCCAACACGCCACACTGAATCCTCCCCCGGTCGAACCCGAGGAATTTGGCACCAAATCGATGTTCTGGGC GCTTGTCTGCTCATTCTGGCTCTATCGGTTCAGCTGGTCGGGCTCAGCCTGGGTGGTAACATTCTTCCTTGGACT CACCTGTGGGTAATTCTGCCATTGGTCTCTAGCGTGGTATTGCTGGCTGCATTTGTCGCTGTTGAAGCGAAAACC ACCGCTGCACCTCTGATTCCATTGAAGATGCTACGAGGACAGCTCGCTGTATCCACACAGATTGCCAACGTTTGT GTCGGGATGGCAGCATATGCATATCTATTTACTCTCCCTCTCATGTTCCAGGTGATCCTTCTTGACTCACCCAGC AAGGCTGGCACCCGACTGGTGATTCCCTGTCTATTCACCCCACTGGGTGGTCTTATAGCGGGAATCATCATGTCG CGCTGGGGCAGATTATCCTCCATTGTACGCGTCGGCGCAGCCCTAATGCTCTTCGGCAATGTGCTCGTCATGCTC CTCCGATTCAACGACTCGGGATGGAAGTATCTCGTCTATGTGATTCCCGCCAACCTGGGTCAGGGGATGGTGTAC CCAGGGATCCTGTTCACATTCCTAGCAGCCTTTGATCACGCCGATCACGCCGTCTCCGCCTCAACCGTCTACCTC ATCCGCTCCCTCGGGAATGTTTGGGGCGTCGCAGTGACCTCCACCATCATGCAGAATACACTTAACTCAGGCCTC GGTGAGGCCTTGAGTGGAATACCAGACAAATGGAAAGTGATCGATGAGATCCGCCACTCAGTCTCGGCTATTTAT GATCTTCCCCCGGATGTGCAATTAGCCGCTCGGCTGGTGTACTACCGCGGAATCAGACTCTCCTTCATGGCCTCC GCGATCTTTGCATTCATCGCGACCGTCGCTGCAATCTTCACTCGCGGAAAGGGTCTGGAGCGTGCGGGCGGCAAG TAA |
| Gene | >Pro_DTO377G3_2|g8733.t1 ATGGCATTGAATCCGAATGAAAGTGCTTCGGCCGGCGTGATGCCGCACGAGAATGAAGTCGAAAGATCGTCAGCA CAAGAAAGCGAAGAGCAACCTTTATTGCGATCGGATCCAGTTCCTGCAACTTGGAGCCCACCACCAGGGTTTCTA CTGATCCAAATCGGTAAGTTCGACCATAATATATACACGATCAAGCAGAATCTAACAATCAACAGCAATCATGGC CAATGTGTTTCTTGGCGGATTTGACGGCACCATCACTGCCTCAACCTATGCTGTTATCAGCTCCGAGTTCAACGC CGCGAACACTGCTTCGTGGCTAACTACCTCGTACTTGATCACAAGCACCGCATTCCAGCCTCTTTATGGCCGATT CTCCGATATACTCGGTCGCCGGTCTTGTTTCTTCACTGCAACCATCACCTTCATGGCTGGTTGTCTGGGATGTGC TGTGGCCCACGATGTAATCTTTCTAAACATCATGCGCGCCTTGACGGGCATTGGAGGCGGAGGATTGATGACTAT GGGTAAGTCGATGATCTTTCAATTGACATATCACTCACTAACAAGCATCCTAGCAACAATCATCAACTCCGATAT CATTCCCTTCCGCCAACGCGGCATGTACCAGGCAATCCAGAACGTCTCGTACGGCTTCGGAGCTATCTGTGGGGC TTCTTTTGGAGGTGCCATCGTTGACTCGATCGGATGGCGCTGGTGCTTCCTGCTGCAGGTCCCAGTCTCTTTGTT CGCATTGGTCATGGGCTATGTAGTTCTAAAGTTCCCAACACGCCACACTGAATCCTCCCCCGGTCGAACCCGAGG AATTTGGCACCAAATCGATGTTCTGGGCGCTTGTCTGCTCATTCTGGCTCTATCGGTTCAGCTGGTCGGGCTCAG CCTGGGTGGTAACATTCTTCCTTGGACTCACCTGTGGGTAATTCTGCCATTGGTCTCTAGCGTGGTATTGCTGGC TGCATTTGTCGCTGTTGAAGCGAAAACCACCGCTGCACCTCTGATTCCATTGAAGATGCTACGAGGACAGCTCGC TGTATCCACACAGATTGCCAACGTTTGTGTCGGGATGGCAGCATATGCAGTAAGCTCACCCGCTCCACTATTATG AGCATCGTAACTAACGCGAATCATTCAGTATCTATTTACTCTCCCTCTCATGTTCCAGGTGATCCTTCTTGACTC ACCCAGCAAGGCTGGCACCCGACTGGTGATTCCCTGTCTATTCACCCCACTGGGTGGTCTTATAGCGGGAATCAT CATGTCGCGCTGGGGCAGATTATCCTCCATTGTACGCGTCGGCGCAGCCCTAATGCTCTTCGGCAATGTGCTCGT CATGCTCCTCCGATTCAACGACTCGGGATGGAAGTATCTCGTCTATGTGATTCCCGCCAACCTGGGTCAGGGGAT GGTGTACCCAGGGATCCTGTTCACATTCCTAGCAGCCTTTGATCACGCCGGTAAGGCACTTTCCCTATCCTTGTC GCTAGCCCATTACCCGGATCAGCGAGCGACCGAGCTATTTGCCAAGCAAGCCTGCTAACAATATCGTATCTAGAT CACGCCGTCTCCGCCTCAACCGTCTACCTCATCCGCTCCCTCGGGAATGTTTGGGGCGTCGCAGTGACCTCCACC ATCATGCAGAATACACTTAACTCAGGCCTCGGTGAGGCCTTGAGTGGAATACCAGACAAATGGAAAGTACAATTC CTTCGCCGTTTGATGATAACGAGCCGCTGAATAAGCCTTGCTGACCAATATACTCGCTCCCTCCTAGGTGATCGA TGAGATCCGCCACTCAGTCTCGGCTATTTATGATCTTCCCCCGGATGTGCAATTAGCCGCTCGGCTGGTGTACTA CCGCGGAATCAGACTCTCCTTCATGGCCTCCGCGATCTTTGCATTCATCGCGACCGTCGCTGCAATCTTCACTCG CGGAAAGGGTCTGGAGCGTGCGGGCGGCAAGTAA |