Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8706.t1
Gene name
Locationscaffold_36:85323..86254
Strand+
Gene length (bp)931
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18271 GH131_N Glycoside hydrolase 131 catalytic N-terminal domain 2.6E-63 19 249

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8706.t1
MCFIAWLVALSGVAEAGEVLWSGLFNASATVADFDEWSWSNQVGAWQWYIHGTASTDQYLGLSPDHKNPADTSDE
QGIRITIDGTSFWNGQTMERSEIIPQTKADLGSGHLFYHFSLKTEDTNAPNASFEHQIAFFESHFTELKYGTLSG
ASGEDNALRWYVGGVSHWETDLKAGQWYNFAYDIDFDAKTVGLWASDGSDDLTQVVSAVSASTSTNSADWHVGEL
RLDNGGLDAAAEDWFWSGIFVEEAPITSSIAGPA*
Coding >Pro_DTO377G3_2|g8706.t1
ATGTGTTTTATTGCATGGCTCGTCGCCCTCTCTGGAGTAGCCGAAGCGGGCGAAGTCCTGTGGAGCGGGTTATTC
AACGCGTCGGCGACGGTTGCCGACTTTGACGAATGGTCATGGTCTAACCAAGTCGGCGCTTGGCAGTGGTATATT
CACGGGACAGCATCCACGGACCAGTATCTGGGTCTCTCGCCTGATCACAAGAACCCGGCCGATACCAGTGATGAA
CAGGGCATCCGGATCACAATCGATGGCACGTCGTTCTGGAATGGACAAACTATGGAACGATCCGAGATCATTCCT
CAGACAAAGGCGGATCTTGGGAGCGGGCATCTGTTCTACCATTTCTCGCTGAAGACAGAGGACACGAATGCACCA
AATGCGAGCTTCGAGCATCAGATCGCGTTCTTCGAGAGTCATTTCACTGAGCTCAAATACGGCACCCTGAGCGGC
GCTTCGGGCGAAGACAACGCGCTTCGTTGGTACGTCGGTGGGGTGTCGCACTGGGAAACCGACCTGAAAGCAGGG
CAGTGGTACAACTTCGCGTACGATATCGATTTTGACGCGAAGACTGTGGGGCTGTGGGCGTCAGATGGGTCCGAT
GACCTCACGCAGGTTGTGTCGGCTGTCAGCGCGTCGACTTCGACAAATTCCGCGGATTGGCATGTCGGCGAATTG
AGGCTCGACAATGGGGGCTTGGATGCAGCTGCCGAGGATTGGTTTTGGTCTGGCATCTTTGTCGAGGAGGCTCCG
ATCACGTCTAGTATTGCAGGTCCTGCGTAA
Transcript >Pro_DTO377G3_2|g8706.t1
ATGTGTTTTATTGCATGGCTCGTCGCCCTCTCTGGAGTAGCCGAAGCGGGCGAAGTCCTGTGGAGCGGGTTATTC
AACGCGTCGGCGACGGTTGCCGACTTTGACGAATGGTCATGGTCTAACCAAGTCGGCGCTTGGCAGTGGTATATT
CACGGGACAGCATCCACGGACCAGTATCTGGGTCTCTCGCCTGATCACAAGAACCCGGCCGATACCAGTGATGAA
CAGGGCATCCGGATCACAATCGATGGCACGTCGTTCTGGAATGGACAAACTATGGAACGATCCGAGATCATTCCT
CAGACAAAGGCGGATCTTGGGAGCGGGCATCTGTTCTACCATTTCTCGCTGAAGACAGAGGACACGAATGCACCA
AATGCGAGCTTCGAGCATCAGATCGCGTTCTTCGAGAGTCATTTCACTGAGCTCAAATACGGCACCCTGAGCGGC
GCTTCGGGCGAAGACAACGCGCTTCGTTGGTACGTCGGTGGGGTGTCGCACTGGGAAACCGACCTGAAAGCAGGG
CAGTGGTACAACTTCGCGTACGATATCGATTTTGACGCGAAGACTGTGGGGCTGTGGGCGTCAGATGGGTCCGAT
GACCTCACGCAGGTTGTGTCGGCTGTCAGCGCGTCGACTTCGACAAATTCCGCGGATTGGCATGTCGGCGAATTG
AGGCTCGACAATGGGGGCTTGGATGCAGCTGCCGAGGATTGGTTTTGGTCTGGCATCTTTGTCGAGGAGGCTCCG
ATCACGTCTAGTATTGCAGGTCCTGCGTAA
Gene >Pro_DTO377G3_2|g8706.t1
ATGTGTTTTATTGCATGGCTCGTCGCCCTCTCTGGAGTAGCCGAAGCGGGCGAAGTCCTGTGGAGCGGGTTATTC
AACGCGTCGGCGACGGTTGCCGACTTTGACGAATGTGAGTGAGTTTCGCGAGTTGCTGTCGATTGGTACTGACAA
GCAAAGGGTCATGGTCTAACCAAGTCGGCGCTTGGCAGTGGTATATTCACGGGACAGCATCCACGGACCAGTATC
TGGGTCTCTCGCCTGATCACAAGAACCCGGCCGATACCAGTGATGAACAGGGCATCCGGATCACAATCGTAGGTC
ATTTTATCTAGTCTGAAGGACGAGAAGCTAATAGCAGTCAGGATGGCACGTCGTTCTGGAATGGACAAACTATGG
AACGATCCGAGATCATTCCTCAGACAAAGGCGGATCTTGGGAGCGGGCATCTGTTCTACCATTTCTCGCTGAAGA
CAGAGGACACGAATGCACCAAATGCGAGCTTCGAGCATCAGATCGCGTTCTTCGAGGTATCACTCCCAGTTCCAC
GGTATAGAAGAAACCAACAGCTGACGATTTTCCGAAGAGTCATTTCACTGAGCTCAAATACGGCACCCTGAGCGG
CGCTTCGGGCGAAGACAACGCGCTTCGTTGGTACGTCGGTGGGGTGTCGCACTGGGAAACCGACCTGAAAGCAGG
GCAGTGGTACAACTTCGCGTACGATATCGATTTTGACGCGAAGACTGTGGGGCTGTGGGCGTCAGATGGGTCCGA
TGACCTCACGCAGGTTGTGTCGGCTGTCAGCGCGTCGACTTCGACAAATTCCGCGGATTGGCATGTCGGCGAATT
GAGGCTCGACAATGGGGGCTTGGATGCAGCTGCCGAGGATTGGTTTTGGTCTGGCATCTTTGTCGAGGAGGCTCC
GATCACGTCTAGTATTGCAGGTCCTGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail