© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8703.t1 |
| Gene name | |
| Location | scaffold_36:72693..74495 |
| Strand | - |
| Gene length (bp) | 1802 |
| Transcript length (bp) | 1527 |
| Coding sequence length (bp) | 1527 |
| Protein length (aa) | 509 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.7E-52 | 36 | 480 |
| PF00324 | AA_permease | Amino acid permease | 3.4E-23 | 54 | 490 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 66 | 88 | 22 |
| 3 | 122 | 144 | 22 |
| 4 | 164 | 183 | 19 |
| 5 | 190 | 212 | 22 |
| 6 | 227 | 249 | 22 |
| 7 | 270 | 292 | 22 |
| 8 | 315 | 337 | 22 |
| 9 | 370 | 392 | 22 |
| 10 | 396 | 418 | 22 |
| 11 | 439 | 461 | 22 |
| 12 | 471 | 493 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8703.t1 MEEHPTKDLPEMEGSPQDQDDMTRMGKIQELKRNFRPLAALSFSAVLQATWEFILISNTQGLENGGLAGVFWSYM WTFVGFGFIIVSLAEMASMAPTSGGQYHWVSEFSSPRYQKFLSYTTGWMSVLAWQAGAASGSFLTGTIIQGLITL RDPSYVPQNWHGTLFVFAMIAVIYFFNVYAASWMPRIQNILLVLHLLCWVIIVVVLFTMAPQNSAKTVFTSFHNG GNWSSMGISLMIGQITAIYGSLSSDATAHMSEEVKDAGRYVPIAIVWGYFGNGILALIVIVGFLLAIPSVPDAIN DSTGFPFLYVFHQFLSISGVNGLTSIILIPVIFSNILFNASTARQTYAFARDRGLPFADWLSRVDLHRRIPVRAI ALSCMISVLLSVINIGSEVAFNAIISLNVAALMYTYAVSISCVIYRKIACPETLPPRRWSLGRFGLAINIIGLLY VIFALFWSFWPPSPLPSARDFNWSVVIFVSVFIGSLLMYLFQGRRHYVGPAMTVQRSY* |
| Coding | >Pro_DTO377G3_2|g8703.t1 ATGGAAGAACATCCCACGAAAGATTTACCAGAGATGGAGGGCAGTCCACAGGATCAGGATGATATGACGCGTATG GGGAAGATCCAGGAATTGAAGCGCAACTTTCGACCCCTTGCAGCGTTGAGCTTTTCAGCGGTTCTTCAAGCTACC TGGGAGTTTATACTCATCTCAAACACCCAAGGTCTCGAAAATGGCGGACTGGCTGGTGTATTCTGGTCTTACATG TGGACATTCGTTGGGTTTGGCTTTATCATTGTTTCGCTAGCCGAGATGGCTTCGATGGCACCCACATCGGGAGGC CAATATCATTGGGTATCAGAGTTTTCCTCGCCTCGTTACCAGAAGTTTCTGAGTTACACCACTGGATGGATGTCC GTACTAGCCTGGCAGGCAGGAGCAGCATCCGGCTCGTTTCTAACTGGAACTATCATCCAAGGTCTCATAACCCTC CGTGATCCGAGCTACGTGCCCCAAAATTGGCATGGAACCTTGTTTGTGTTCGCCATGATAGCTGTCATTTACTTT TTCAATGTCTACGCGGCAAGCTGGATGCCACGAATCCAGAACATCCTTCTCGTGCTACATCTGTTATGCTGGGTC ATCATTGTGGTTGTTTTGTTCACCATGGCTCCTCAAAACTCGGCCAAAACCGTGTTCACATCGTTCCACAATGGT GGCAACTGGTCTAGTATGGGGATCAGCTTGATGATCGGTCAAATTACAGCCATCTACGGCTCTCTGAGCTCCGAC GCCACCGCACATATGTCCGAAGAAGTTAAGGATGCAGGTCGATACGTACCAATCGCAATCGTATGGGGATACTTC GGCAACGGAATACTAGCACTGATAGTAATCGTTGGATTTCTTCTTGCTATCCCCTCAGTACCCGATGCTATCAAC GACAGCACCGGCTTCCCCTTCCTCTACGTGTTCCACCAATTCCTCTCAATCTCCGGTGTCAACGGCCTCACATCA ATAATCCTAATACCAGTCATCTTCAGTAACATCCTATTCAATGCATCAACTGCACGTCAAACATATGCATTCGCA CGAGATCGCGGCCTCCCCTTCGCAGACTGGCTCTCTCGAGTTGACCTTCATCGGCGAATCCCAGTGCGAGCGATC GCGCTCTCATGCATGATCAGTGTCTTACTGTCGGTAATCAACATAGGCTCGGAGGTTGCATTCAACGCGATCATC TCTCTCAACGTTGCTGCACTGATGTACACATACGCGGTATCCATAAGTTGCGTGATTTACCGGAAGATTGCTTGT CCTGAAACGCTACCTCCTCGACGTTGGAGTCTTGGTCGTTTCGGTCTTGCGATAAATATCATTGGGCTGCTCTAT GTTATTTTCGCACTCTTTTGGTCGTTCTGGCCTCCGAGCCCTTTGCCTTCGGCTCGAGACTTTAATTGGAGTGTG GTTATTTTCGTTAGTGTGTTCATCGGCAGTCTTTTGATGTACCTGTTTCAGGGCAGAAGACACTATGTCGGGCCT GCGATGACGGTCCAGCGGAGCTATTGA |
| Transcript | >Pro_DTO377G3_2|g8703.t1 ATGGAAGAACATCCCACGAAAGATTTACCAGAGATGGAGGGCAGTCCACAGGATCAGGATGATATGACGCGTATG GGGAAGATCCAGGAATTGAAGCGCAACTTTCGACCCCTTGCAGCGTTGAGCTTTTCAGCGGTTCTTCAAGCTACC TGGGAGTTTATACTCATCTCAAACACCCAAGGTCTCGAAAATGGCGGACTGGCTGGTGTATTCTGGTCTTACATG TGGACATTCGTTGGGTTTGGCTTTATCATTGTTTCGCTAGCCGAGATGGCTTCGATGGCACCCACATCGGGAGGC CAATATCATTGGGTATCAGAGTTTTCCTCGCCTCGTTACCAGAAGTTTCTGAGTTACACCACTGGATGGATGTCC GTACTAGCCTGGCAGGCAGGAGCAGCATCCGGCTCGTTTCTAACTGGAACTATCATCCAAGGTCTCATAACCCTC CGTGATCCGAGCTACGTGCCCCAAAATTGGCATGGAACCTTGTTTGTGTTCGCCATGATAGCTGTCATTTACTTT TTCAATGTCTACGCGGCAAGCTGGATGCCACGAATCCAGAACATCCTTCTCGTGCTACATCTGTTATGCTGGGTC ATCATTGTGGTTGTTTTGTTCACCATGGCTCCTCAAAACTCGGCCAAAACCGTGTTCACATCGTTCCACAATGGT GGCAACTGGTCTAGTATGGGGATCAGCTTGATGATCGGTCAAATTACAGCCATCTACGGCTCTCTGAGCTCCGAC GCCACCGCACATATGTCCGAAGAAGTTAAGGATGCAGGTCGATACGTACCAATCGCAATCGTATGGGGATACTTC GGCAACGGAATACTAGCACTGATAGTAATCGTTGGATTTCTTCTTGCTATCCCCTCAGTACCCGATGCTATCAAC GACAGCACCGGCTTCCCCTTCCTCTACGTGTTCCACCAATTCCTCTCAATCTCCGGTGTCAACGGCCTCACATCA ATAATCCTAATACCAGTCATCTTCAGTAACATCCTATTCAATGCATCAACTGCACGTCAAACATATGCATTCGCA CGAGATCGCGGCCTCCCCTTCGCAGACTGGCTCTCTCGAGTTGACCTTCATCGGCGAATCCCAGTGCGAGCGATC GCGCTCTCATGCATGATCAGTGTCTTACTGTCGGTAATCAACATAGGCTCGGAGGTTGCATTCAACGCGATCATC TCTCTCAACGTTGCTGCACTGATGTACACATACGCGGTATCCATAAGTTGCGTGATTTACCGGAAGATTGCTTGT CCTGAAACGCTACCTCCTCGACGTTGGAGTCTTGGTCGTTTCGGTCTTGCGATAAATATCATTGGGCTGCTCTAT GTTATTTTCGCACTCTTTTGGTCGTTCTGGCCTCCGAGCCCTTTGCCTTCGGCTCGAGACTTTAATTGGAGTGTG GTTATTTTCGTTAGTGTGTTCATCGGCAGTCTTTTGATGTACCTGTTTCAGGGCAGAAGACACTATGTCGGGCCT GCGATGACGGTCCAGCGGAGCTATTGA |
| Gene | >Pro_DTO377G3_2|g8703.t1 ATGGAAGAACATCCCACGAAAGATTTACCAGAGATGGAGGGCAGTCCACAGGATCAGGATGATATGACGCGTATG GGGAAGATCCAGGAATTGAAGGTCTTCTTTCTTTCTCTGTGACACAATCAGGACACTGTTACTGACATGTTTGAA GCGCAACTTTCGACCCCTTGCAGCGTTGAGCTTTTCAGCGGTTCTTCAAGCTACCTGGGAGTTTATACTCATGTG AGCCGCAGTCTCTTGGGCCATCTTATCAGCTGCTAATCGCCTCATCCTTAGCTCAAACACCCAAGGTCTCGAAAA TGGCGGACTGGCTGGTGTATTCTGGTCTTACATGTGGACATTCGTTGGGTTTGGCTTTATCATTGTTTCGCTAGC CGAGATGGCTTCGATGTGAGTTATTATGTGCCTCATTTTCTGAGATTTCTCACTTTTCCTTTCTCCAACAGGGCA CCCACATCGGGAGGCCAATATCATTGGGTATCAGAGTTTTCCTCGCCTCGTTACCAGAAGTTTCTGAGTTACACC ACTGGTGAGATCGCTCGTCTATTCATCTTTGACGATTGCTAATGGGTGTGATTAAGGATGGATGTCCGTACTAGC CTGGCAGGCAGGAGCAGCATCCGGCTCGTTTCTAACTGGAACTATCATCCAAGGTCTCATAACCCTCCGTGATCC GAGCTACGTGCCCCAAAATTGGCATGGAACCTTGTTTGTGTTCGCCATGATAGCTGTCATTTACTTTTTCAATGT CTACGCGGCAAGCTGGATGCCACGAATCCAGAACATCCTTCTCGTGCTACATCTGTTATGCTGGGTCATCATTGT GGTTGTTTTGTTCACCATGGCTCCTCAAAACTCGGCCAAAACCGTGTTCACATCGTTCCACAATGGTGGCAACTG GTCTAGTATGGGGATCAGCTTGATGATCGGTCAAATTACAGCCATCTACGGCTCTCTGAGTGTGTACAAACCGTA TCATTCTTTCGCGGTACAAGGCTAACATGGACACATTTATAGGCTCCGACGCCACCGCACATATGTCCGAAGAAG TTAAGGATGCAGGTCGATACGTACCAATCGCAATCGTATGGGGATACTTCGGCAACGGAATACTAGCACTGATAG TAATCGTTGGATTTCTTCTTGCTATCCCCTCAGTACCCGATGCTATCAACGACAGCACCGGCTTCCCCTTCCTCT ACGTGTTCCACCAATTCCTCTCAATCTCCGGTGTCAACGGCCTCACATCAATAATCCTAATACCAGTCATCTTCA GTAACATCCTATTCAATGCATCAACTGCACGTCAAACATATGCATTCGCACGAGATCGCGGCCTCCCCTTCGCAG ACTGGCTCTCTCGAGTTGACCTTCATCGGCGAATCCCAGTGCGAGCGATCGCGCTCTCATGCATGATCAGTGTCT TACTGTCGGTAATCAACATAGGCTCGGAGGTTGCATTCAACGCGATCATCTCTCTCAACGTTGCTGCACTGATGT ACACATACGCGGTATCCATAAGTTGCGTGATTTACCGGAAGATTGCTTGTCCTGAAACGCTACCTCCTCGACGTT GGAGTCTTGGTCGTTTCGGTCTTGCGATAAATATCATTGGGCTGCTCTATGTTATTTTCGCACTCTTTTGGTCGT TCTGGCCTCCGAGCCCTTTGCCTTCGGCTCGAGACTTTAATTGGAGTGTGGTTATTTTCGTTAGTGTGTTCATCG GCAGTCTTTTGATGTACCTGTTTCAGGGCAGAAGACACTATGTCGGGCCTGCGATGACGGTCCAGCGGAGCTATT GA |