© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g870.t1 |
| Gene name | |
| Location | scaffold_01:2319739..2321695 |
| Strand | - |
| Gene length (bp) | 1956 |
| Transcript length (bp) | 1719 |
| Coding sequence length (bp) | 1719 |
| Protein length (aa) | 573 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00884 | Sulfatase | Sulfatase | 2.0E-64 | 18 | 365 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008484 | sulfuric ester hydrolase activity | Yes |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 16 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 4.58 | 1.58 | 7.58 |
| 5d_25C | Five days - 25 degrees Celsius | 11.65 | 5.30 | 18.00 |
| 7d_25C | Seven days - 25 degrees Celsius | 14.07 | 6.84 | 21.30 |
| 10d_25C | Ten days - 25 degrees Celsius | 20.04 | 10.58 | 29.51 |
| 7d_15C | Seven days - 15 degrees Celsius | 44.90 | 26.02 | 63.79 |
| 7d_30C | Seven days - 30 degrees Celsius | 11.88 | 5.49 | 18.28 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.001804 | yes |
| 3d_25C | 7d_25C | 0.000700 | yes |
| 3d_25C | 7d_15C | 0.000700 | yes |
| 3d_25C | 7d_30C | 0.001804 | yes |
| 3d_25C | 10d_25C | 0.000700 | yes |
| 5d_25C | 7d_25C | 0.600962 | no |
| 5d_25C | 7d_15C | 0.000700 | yes |
| 5d_25C | 7d_30C | 0.969259 | no |
| 5d_25C | 10d_25C | 0.051659 | no |
| 7d_25C | 7d_15C | 0.000700 | yes |
| 7d_25C | 7d_30C | 0.652491 | no |
| 7d_25C | 10d_25C | 0.227602 | no |
| 7d_15C | 7d_30C | 0.000700 | yes |
| 7d_15C | 10d_25C | 0.000700 | yes |
| 7d_30C | 10d_25C | 0.058634 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g870.t1 MNVLRLLLLTTLAVAKQPNILFILTDDQGKYVGGLEHMPKLQETLVQQGTSYSKHFCSIALCCPSRANLWTGRMP HNTNVTDVGLPYGGYPKVVSAGWNDNYLPLWMQEAGYNTYYVGKMWNAHTEENYNNPYVRGFNGSDFLLDPYTYR YWYARMTRNGAAPVKYDGQYSTDVIAEKAEGFIDEAVKHKQPWMLTVAPNAPHSNGSHDSTRNANWFGEPEFAPR HAGLFEDVQAPRDESFNTLIENAVSWVQNVPELNQTNVDYIDEFQRCRLRALQAVDEMVGRLVERLEKVGELDNT YIFFSTDNGYHLGQHRMQPGKNCGYETDINVPLIVRGPGIGKNQTLDAITSHTDLAPTFLNIAGVTRDGLDGKTI PTTIAASTADNRTEHVAIEYWGLAVPEGIYGYASDKLDQPHNSYQRNTYKGIRLVADDYSLYYAVWCTNEKEFFD LKSDPHQTVNLGTYPAKHPNYKIANRELPQIIARLDALMLVLKSCEGDACRYPWRQLHPAGKVNSLADALDSGFD TFYANQPKVSFSSCENGYIISAEGPQTFNAYGASAKRGWSLDELFGW* |
| Coding | >Pro_DTO377G3_2|g870.t1 ATGAACGTACTGAGATTGCTGCTCTTGACAACTCTAGCTGTCGCCAAGCAACCTAATATTCTCTTCATTCTAACA GATGATCAGGGTAAATATGTGGGCGGTTTAGAGCACATGCCCAAGTTGCAGGAAACTCTCGTTCAACAAGGAACA AGCTACTCCAAACATTTCTGCTCAATCGCACTATGCTGTCCATCCCGAGCCAACCTCTGGACCGGTCGCATGCCA CACAACACGAACGTAACCGACGTTGGACTCCCCTACGGCGGCTATCCAAAAGTAGTCTCAGCAGGCTGGAACGAC AACTACCTCCCACTATGGATGCAAGAAGCAGGCTACAACACCTACTACGTAGGCAAGATGTGGAATGCACACACA GAGGAAAACTACAACAATCCGTACGTACGAGGGTTCAACGGCTCGGACTTCCTCCTAGATCCGTACACATACCGA TACTGGTACGCACGGATGACGCGCAACGGCGCAGCACCAGTCAAGTACGACGGGCAGTACTCGACAGACGTGATC GCCGAAAAAGCAGAGGGTTTCATCGACGAGGCGGTTAAGCACAAACAGCCGTGGATGCTGACAGTAGCGCCCAAC GCGCCACACTCGAATGGGTCTCATGATTCCACGAGGAACGCGAACTGGTTCGGTGAGCCGGAGTTTGCGCCGCGG CATGCGGGTTTGTTTGAGGATGTGCAGGCGCCGCGCGATGAGAGCTTTAATACACTGATTGAGAATGCCGTTAGC TGGGTGCAGAATGTGCCTGAGTTGAATCAGACGAATGTTGATTATATTGATGAGTTCCAGCGGTGTCGGCTGCGG GCTTTGCAGGCTGTTGATGAGATGGTTGGGAGGCTTGTTGAGAGGTTGGAAAAGGTTGGGGAGCTGGATAATACT TATATCTTCTTTTCGACGGATAATGGGTATCATCTGGGCCAGCATCGGATGCAGCCTGGTAAGAACTGTGGTTAT GAAACTGATATCAACGTCCCTCTCATCGTCCGAGGCCCTGGTATCGGAAAGAATCAGACTCTGGATGCTATCACT TCTCATACGGATCTAGCTCCTACTTTCTTGAACATAGCTGGCGTTACTCGAGACGGATTGGACGGTAAGACTATC CCTACTACCATTGCTGCCAGCACGGCAGACAATAGGACGGAGCATGTTGCTATTGAATACTGGGGATTAGCAGTA CCAGAAGGGATCTACGGGTATGCCAGCGACAAACTCGACCAGCCACATAACAGCTACCAAAGAAACACATACAAG GGTATCCGACTGGTTGCCGACGACTATAGTCTATACTATGCAGTATGGTGCACAAACGAGAAAGAGTTCTTCGAT CTGAAGAGCGATCCCCATCAAACCGTGAACCTAGGCACATACCCAGCCAAACACCCCAACTACAAGATTGCAAAT CGCGAGCTGCCACAAATAATAGCGCGATTGGACGCACTCATGCTAGTGCTCAAGTCCTGCGAAGGTGACGCATGT CGATACCCCTGGCGCCAGCTACACCCAGCCGGTAAAGTGAACAGTCTTGCTGATGCGCTGGACTCGGGCTTCGAT ACCTTCTACGCGAATCAGCCGAAGGTCTCGTTCTCGTCTTGTGAGAATGGGTATATTATTTCGGCTGAGGGGCCG CAGACGTTCAATGCTTATGGGGCCAGTGCAAAGAGAGGATGGAGTTTGGATGAGTTGTTTGGGTGGTGA |
| Transcript | >Pro_DTO377G3_2|g870.t1 ATGAACGTACTGAGATTGCTGCTCTTGACAACTCTAGCTGTCGCCAAGCAACCTAATATTCTCTTCATTCTAACA GATGATCAGGGTAAATATGTGGGCGGTTTAGAGCACATGCCCAAGTTGCAGGAAACTCTCGTTCAACAAGGAACA AGCTACTCCAAACATTTCTGCTCAATCGCACTATGCTGTCCATCCCGAGCCAACCTCTGGACCGGTCGCATGCCA CACAACACGAACGTAACCGACGTTGGACTCCCCTACGGCGGCTATCCAAAAGTAGTCTCAGCAGGCTGGAACGAC AACTACCTCCCACTATGGATGCAAGAAGCAGGCTACAACACCTACTACGTAGGCAAGATGTGGAATGCACACACA GAGGAAAACTACAACAATCCGTACGTACGAGGGTTCAACGGCTCGGACTTCCTCCTAGATCCGTACACATACCGA TACTGGTACGCACGGATGACGCGCAACGGCGCAGCACCAGTCAAGTACGACGGGCAGTACTCGACAGACGTGATC GCCGAAAAAGCAGAGGGTTTCATCGACGAGGCGGTTAAGCACAAACAGCCGTGGATGCTGACAGTAGCGCCCAAC GCGCCACACTCGAATGGGTCTCATGATTCCACGAGGAACGCGAACTGGTTCGGTGAGCCGGAGTTTGCGCCGCGG CATGCGGGTTTGTTTGAGGATGTGCAGGCGCCGCGCGATGAGAGCTTTAATACACTGATTGAGAATGCCGTTAGC TGGGTGCAGAATGTGCCTGAGTTGAATCAGACGAATGTTGATTATATTGATGAGTTCCAGCGGTGTCGGCTGCGG GCTTTGCAGGCTGTTGATGAGATGGTTGGGAGGCTTGTTGAGAGGTTGGAAAAGGTTGGGGAGCTGGATAATACT TATATCTTCTTTTCGACGGATAATGGGTATCATCTGGGCCAGCATCGGATGCAGCCTGGTAAGAACTGTGGTTAT GAAACTGATATCAACGTCCCTCTCATCGTCCGAGGCCCTGGTATCGGAAAGAATCAGACTCTGGATGCTATCACT TCTCATACGGATCTAGCTCCTACTTTCTTGAACATAGCTGGCGTTACTCGAGACGGATTGGACGGTAAGACTATC CCTACTACCATTGCTGCCAGCACGGCAGACAATAGGACGGAGCATGTTGCTATTGAATACTGGGGATTAGCAGTA CCAGAAGGGATCTACGGGTATGCCAGCGACAAACTCGACCAGCCACATAACAGCTACCAAAGAAACACATACAAG GGTATCCGACTGGTTGCCGACGACTATAGTCTATACTATGCAGTATGGTGCACAAACGAGAAAGAGTTCTTCGAT CTGAAGAGCGATCCCCATCAAACCGTGAACCTAGGCACATACCCAGCCAAACACCCCAACTACAAGATTGCAAAT CGCGAGCTGCCACAAATAATAGCGCGATTGGACGCACTCATGCTAGTGCTCAAGTCCTGCGAAGGTGACGCATGT CGATACCCCTGGCGCCAGCTACACCCAGCCGGTAAAGTGAACAGTCTTGCTGATGCGCTGGACTCGGGCTTCGAT ACCTTCTACGCGAATCAGCCGAAGGTCTCGTTCTCGTCTTGTGAGAATGGGTATATTATTTCGGCTGAGGGGCCG CAGACGTTCAATGCTTATGGGGCCAGTGCAAAGAGAGGATGGAGTTTGGATGAGTTGTTTGGGTGGTGA |
| Gene | >Pro_DTO377G3_2|g870.t1 ATGAACGTACTGAGATTGCTGCTCTTGACAACTCTAGCTGTCGCCAAGCAACCTAATATTCTCTTCATTCTAACA GATGATCAGGGTAAATATGTGGGCGGTTTAGAGCACATGCCCAAGTTGCAGGTGGGTCTATTCCTTCCATACAAG CCCTACTTTCTCCCTCCCCAGACTAACACTTTAACAAGGAAACTCTCGTTCAACAAGGAACAAGCTACTCCAAAC ATTTCTGCTCAATCGCACTATGCTGTCCATCCCGAGCCAACCTCTGGACCGGTCGCATGCCACACAACACGAACG TAACCGACGTTGGACTCCCCTACGGCGGCTATCCAAAAGTAGTCTCAGCAGGCTGGAACGACAACTACCTCCCAC TATGGATGCAAGAAGCAGGCTACAACACCTACTACGTAGGCAAGATGTGGAATGCACACACAGAGGAAAACTACA ACAATCCGTACGTACGAGGGTTCAACGGCTCGGACTTCCTCCTAGATCCGTACACATACCGATACTGGTACGCAC GGATGACGCGCAACGGCGCAGCACCAGTCAAGTACGACGGGCAGTACTCGACAGACGTGATCGCCGAAAAAGCAG AGGGTTTCATCGACGAGGCGGTTAAGCACAAACAGCCGTGGATGCTGACAGTAGCGCCCAACGCGCCACACTCGA ATGGGTCTCATGATTCCACGAGGAACGCGAACTGGTTCGGTGAGCCGGAGTTTGCGCCGCGGCATGCGGGTTTGT TTGAGGATGTGCAGGCGCCGCGCGATGAGAGCTTTAATACACTGATTGAGAATGCCGTTAGCTGGGTGCAGAATG TGCCTGAGTTGAATCAGACGAATGTTGATTATATTGATGAGTTCCAGCGGTGTCGGCTGCGGGCTTTGCAGGCTG TTGATGAGATGGTTGGGAGGCTTGTTGAGAGGTTGGAAAAGGTTGGGGAGCTGGATAATACTTATATCTTCTTTT CGACGGATAATGGGTATCATCTGGGCCAGCATCGGATGCAGCCTGGTAAGAACTGTGGTTATGGTGAGTTGGTCT TGATTGTCTTGATTGTCTATGGTGTATAGATATGCTAACTCGTATAGAAACTGATATCAACGTCCCTCTCATCGT CCGAGGCCCTGGTATCGGAAAGAATCAGACTCTGGATGCTATCACTTCTCATACGGATCTAGCTCCTACTTTCTT GAACATAGCTGGCGTTACTCGAGACGGATTGGACGGTAAGACTATCCCTACTACCATTGCTGCCAGCACGGCAGA CAATAGGACGGAGCATGTTGCTATTGAATACTGGGGATTAGTGAGTAATTCACACAGCAAGCACATATTAACCAA CCAGCTAACATCAAGATAGGCAGTACCAGAAGGGATCTACGGGTATGCCAGCGACAAACTCGACCAGCCACATAA CAGCTACCAAAGAAACACATACAAGGGTATCCGACTGGTTGCCGACGACTATAGTCTATACTATGCAGTATGGTG CACAAACGAGAAAGAGTTCTTCGATCTGAAGGTAAGCCATCCATCCCCTTCTATCCCACAGGATATTCAACAAGC CTTAACACTCTAAAAAAGAGCGATCCCCATCAAACCGTGAACCTAGGCACATACCCAGCCAAACACCCCAACTAC AAGATTGCAAATCGCGAGCTGCCACAAATAATAGCGCGATTGGACGCACTCATGCTAGTGCTCAAGTCCTGCGAA GGTGACGCATGTCGATACCCCTGGCGCCAGCTACACCCAGCCGGTAAAGTGAACAGTCTTGCTGATGCGCTGGAC TCGGGCTTCGATACCTTCTACGCGAATCAGCCGAAGGTCTCGTTCTCGTCTTGTGAGAATGGGTATATTATTTCG GCTGAGGGGCCGCAGACGTTCAATGCTTATGGGGCCAGTGCAAAGAGAGGATGGAGTTTGGATGAGTTGTTTGGG TGGTGA |