Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g869.t1
Gene name
Locationscaffold_01:2317387..2319523
Strand+
Gene length (bp)2136
Transcript length (bp)1917
Coding sequence length (bp)1917
Protein length (aa) 639

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00682 HMGL-like HMGL-like 2.9E-81 34 317
PF08502 LeuA_dimer LeuA allosteric (dimerisation) domain 8.9E-23 432 579

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003852 2-isopropylmalate synthase activity Yes
GO:0009098 leucine biosynthetic process Yes
GO:0046394 carboxylic acid biosynthetic process No
GO:0009058 biosynthetic process No
GO:0006520 cellular amino acid metabolic process No
GO:0008152 metabolic process No
GO:0016740 transferase activity No
GO:0006082 organic acid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:1901605 alpha-amino acid metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0019752 carboxylic acid metabolic process No
GO:1901607 alpha-amino acid biosynthetic process No
GO:0016746 acyltransferase activity No
GO:0006551 leucine metabolic process No
GO:0044238 primary metabolic process No
GO:0008652 cellular amino acid biosynthetic process No
GO:0003674 molecular_function No
GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer No
GO:0006807 nitrogen compound metabolic process No
GO:0044281 small molecule metabolic process No
GO:0009081 branched-chain amino acid metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0016053 organic acid biosynthetic process No
GO:0044283 small molecule biosynthetic process No
GO:0043436 oxoacid metabolic process No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009082 branched-chain amino acid biosynthetic process No
GO:0009987 cellular process No
GO:1901576 organic substance biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup6511
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g7133.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g546.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g1382.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8876.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g6993.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g7201.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g361.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g4790.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g4997.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g3236.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8196.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g2152.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g6313.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g6662.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g2800.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g1684.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g5744.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g7910.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g734.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g792.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g1574.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g1945.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g8160.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g5867.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g4214.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g1242.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g3441.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g4403.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g1003.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g93.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g4651.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g8283.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g3945.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g869.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g869.t1
MPMLKDPSKKYKPFKPVNLPNRQWPNKIIDKPPRWLATDLRDGNQSLPDPMDGEQKYRFFKMLVDIGYKEIEVSF
PSASQTDFDFTRRLVEEPGLTPDDVALQVLAPCREDLIRRTVDSLKGAKKAILHIYLATSPCFRRIIFNMDHKQS
LEMAVKCTKYARSITKDDPSQAGTDWQFEFSPETFSDTEPEYAVEVCQAVKAAWGPTEEKPIIFNLPATVEMATP
NVFADQVEYFCTNMTEREKFVVSVHPHNDRGCAVAAAELAQMAGADRVEGTLFGNGERTGNVDLVTLALNLYTQG
VSPNVDFSDINSVIKVVEESNKIPVNERAPYGGQLVVCAFSGSHQDAIKKGFKLRQDGEGADEETEWEVPYLPLD
PQDIGRTYEAVIRVNSQSGKGGAAWIILRSLELDLPRALQVEFSKIVQEKTEAVSRELKPTEIVNLFEEAYHLKS
NPRFTLVDYSITTDRSQSPAPPEPGKALNTKNLKRRFTGIIEIDNVQHAITGVGPGAISSLATALSTLGIDLDVR
DYKEHSIGRGRDTKAATYIQCTAAGSNQQVWGVGIHQDVVQASLIALLSAASSFLTSRAGSPAPFRPIRSNTLTN
EDIEALEQLTSTPEAVTSNGGLSAKANIEQLTKKAENL*
Coding >Pro_DTO377G3_2|g869.t1
ATGCCGATGCTCAAGGATCCCTCAAAAAAGTACAAGCCCTTCAAGCCGGTGAATCTGCCAAATCGCCAATGGCCC
AATAAAATTATTGACAAGCCTCCTCGCTGGCTGGCAACTGATCTGCGTGATGGCAACCAGTCTCTGCCGGACCCA
ATGGATGGCGAGCAAAAATACCGTTTCTTCAAGATGCTCGTGGATATTGGTTACAAGGAAATCGAAGTGTCCTTC
CCTTCCGCATCCCAAACGGACTTCGACTTTACCCGCCGTCTGGTAGAAGAGCCCGGTCTCACACCCGATGATGTC
GCCCTGCAGGTCCTGGCCCCCTGCCGTGAGGATCTCATCCGTCGCACAGTCGACTCCCTGAAGGGCGCCAAGAAG
GCTATCCTCCACATCTACCTCGCAACGAGCCCCTGTTTCCGTCGCATAATCTTCAACATGGACCACAAGCAGAGT
CTGGAGATGGCTGTCAAATGCACAAAGTATGCCCGCTCTATCACCAAGGACGACCCCTCCCAGGCCGGCACAGAT
TGGCAATTCGAGTTCTCCCCCGAGACTTTCTCCGATACCGAGCCCGAGTACGCCGTGGAGGTCTGCCAGGCTGTG
AAGGCTGCCTGGGGACCCACGGAGGAGAAGCCCATCATATTTAACCTGCCCGCCACGGTAGAGATGGCCACCCCC
AACGTCTTTGCTGATCAGGTCGAGTACTTCTGCACAAACATGACTGAGCGCGAGAAGTTTGTTGTCTCAGTCCAC
CCGCATAACGACCGTGGCTGCGCTGTTGCCGCCGCTGAACTGGCACAGATGGCTGGTGCCGATCGTGTAGAGGGT
ACTCTGTTCGGCAACGGTGAGCGTACCGGAAACGTGGACCTGGTTACTCTCGCCCTGAACCTGTACACACAAGGT
GTCTCGCCAAACGTCGACTTCTCGGACATCAACTCTGTCATCAAGGTGGTAGAGGAGAGCAACAAGATCCCAGTC
AACGAGCGTGCACCATATGGTGGTCAGCTCGTGGTGTGCGCATTCTCTGGAAGTCACCAAGATGCAATCAAGAAG
GGCTTCAAACTGCGCCAAGATGGCGAGGGCGCCGACGAGGAAACCGAGTGGGAAGTCCCGTACCTCCCCCTGGAT
CCCCAAGATATCGGCCGTACCTACGAGGCAGTCATCCGTGTCAACTCCCAAAGTGGCAAGGGTGGCGCCGCCTGG
ATTATCCTGCGAAGCCTGGAGCTGGATCTCCCTCGCGCTCTGCAGGTCGAGTTCAGCAAGATCGTGCAGGAGAAG
ACCGAGGCTGTCAGCCGGGAGCTGAAACCTACCGAGATCGTCAACCTCTTCGAGGAGGCCTACCACCTCAAGTCA
AACCCCCGCTTCACCCTTGTCGACTACAGCATCACCACCGACCGCTCGCAGTCCCCTGCTCCTCCTGAGCCCGGC
AAGGCCCTCAACACCAAGAACCTCAAGCGTCGCTTCACCGGTATTATCGAGATCGACAATGTTCAGCATGCCATC
ACCGGTGTCGGCCCAGGTGCTATTTCCTCCCTGGCTACCGCTCTTTCTACCCTCGGTATTGATCTCGATGTCCGC
GACTACAAGGAACACTCCATTGGTCGCGGTCGCGACACCAAGGCTGCTACCTACATTCAGTGCACAGCAGCCGGC
AGCAATCAACAGGTGTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCCTCTCTGATTGCGCTGCTTAGCGCC
GCCAGCTCGTTCCTCACCTCCCGGGCTGGTTCTCCTGCTCCTTTCCGTCCCATCCGCTCCAACACCCTCACCAAC
GAGGACATCGAAGCTCTCGAGCAGTTGACCAGCACTCCAGAGGCTGTTACATCTAACGGCGGTCTGAGCGCCAAG
GCCAACATCGAACAGCTGACAAAAAAGGCTGAAAATTTGTAA
Transcript >Pro_DTO377G3_2|g869.t1
ATGCCGATGCTCAAGGATCCCTCAAAAAAGTACAAGCCCTTCAAGCCGGTGAATCTGCCAAATCGCCAATGGCCC
AATAAAATTATTGACAAGCCTCCTCGCTGGCTGGCAACTGATCTGCGTGATGGCAACCAGTCTCTGCCGGACCCA
ATGGATGGCGAGCAAAAATACCGTTTCTTCAAGATGCTCGTGGATATTGGTTACAAGGAAATCGAAGTGTCCTTC
CCTTCCGCATCCCAAACGGACTTCGACTTTACCCGCCGTCTGGTAGAAGAGCCCGGTCTCACACCCGATGATGTC
GCCCTGCAGGTCCTGGCCCCCTGCCGTGAGGATCTCATCCGTCGCACAGTCGACTCCCTGAAGGGCGCCAAGAAG
GCTATCCTCCACATCTACCTCGCAACGAGCCCCTGTTTCCGTCGCATAATCTTCAACATGGACCACAAGCAGAGT
CTGGAGATGGCTGTCAAATGCACAAAGTATGCCCGCTCTATCACCAAGGACGACCCCTCCCAGGCCGGCACAGAT
TGGCAATTCGAGTTCTCCCCCGAGACTTTCTCCGATACCGAGCCCGAGTACGCCGTGGAGGTCTGCCAGGCTGTG
AAGGCTGCCTGGGGACCCACGGAGGAGAAGCCCATCATATTTAACCTGCCCGCCACGGTAGAGATGGCCACCCCC
AACGTCTTTGCTGATCAGGTCGAGTACTTCTGCACAAACATGACTGAGCGCGAGAAGTTTGTTGTCTCAGTCCAC
CCGCATAACGACCGTGGCTGCGCTGTTGCCGCCGCTGAACTGGCACAGATGGCTGGTGCCGATCGTGTAGAGGGT
ACTCTGTTCGGCAACGGTGAGCGTACCGGAAACGTGGACCTGGTTACTCTCGCCCTGAACCTGTACACACAAGGT
GTCTCGCCAAACGTCGACTTCTCGGACATCAACTCTGTCATCAAGGTGGTAGAGGAGAGCAACAAGATCCCAGTC
AACGAGCGTGCACCATATGGTGGTCAGCTCGTGGTGTGCGCATTCTCTGGAAGTCACCAAGATGCAATCAAGAAG
GGCTTCAAACTGCGCCAAGATGGCGAGGGCGCCGACGAGGAAACCGAGTGGGAAGTCCCGTACCTCCCCCTGGAT
CCCCAAGATATCGGCCGTACCTACGAGGCAGTCATCCGTGTCAACTCCCAAAGTGGCAAGGGTGGCGCCGCCTGG
ATTATCCTGCGAAGCCTGGAGCTGGATCTCCCTCGCGCTCTGCAGGTCGAGTTCAGCAAGATCGTGCAGGAGAAG
ACCGAGGCTGTCAGCCGGGAGCTGAAACCTACCGAGATCGTCAACCTCTTCGAGGAGGCCTACCACCTCAAGTCA
AACCCCCGCTTCACCCTTGTCGACTACAGCATCACCACCGACCGCTCGCAGTCCCCTGCTCCTCCTGAGCCCGGC
AAGGCCCTCAACACCAAGAACCTCAAGCGTCGCTTCACCGGTATTATCGAGATCGACAATGTTCAGCATGCCATC
ACCGGTGTCGGCCCAGGTGCTATTTCCTCCCTGGCTACCGCTCTTTCTACCCTCGGTATTGATCTCGATGTCCGC
GACTACAAGGAACACTCCATTGGTCGCGGTCGCGACACCAAGGCTGCTACCTACATTCAGTGCACAGCAGCCGGC
AGCAATCAACAGGTGTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCCTCTCTGATTGCGCTGCTTAGCGCC
GCCAGCTCGTTCCTCACCTCCCGGGCTGGTTCTCCTGCTCCTTTCCGTCCCATCCGCTCCAACACCCTCACCAAC
GAGGACATCGAAGCTCTCGAGCAGTTGACCAGCACTCCAGAGGCTGTTACATCTAACGGCGGTCTGAGCGCCAAG
GCCAACATCGAACAGCTGACAAAAAAGGCTGAAAATTTGTAA
Gene >Pro_DTO377G3_2|g869.t1
ATGCCGATGTATGTTGCGATGACTCCAATTCGGTGTTCCTACATACTAATCTCTTGAAGGCTCAAGGATCCCTCA
AAAAAGTACAAGCCCTTCAAGCCGGTGAATCTGCCAAATCGCCAATGGCCCAATAAAATTATTGACAAGCCTCCT
CGCTGGCTGGCAACTGATCTGCGTGATGGCAACCAGTCTCTGCCGGACCCAATGGTATGATATGATGTACTGCGC
TCAATGCTGTTTCCCATATTGATTGGATTGGATCTATAGGATGGCGAGCAAAAATACCGTTTCTTCAAGATGCTC
GTGGATATTGGTTACAAGGAAATCGAAGTGTCCTTCCCTTCCGCATCCCAAACGGACTTCGACTTTACCCGCCGT
CTGGTAGAAGAGCCCGGTCTCACACCCGATGATGTCGCCCTGCAGGTCCTGGCCCCCTGCCGTGAGGATCTCATC
CGTCGCACAGTCGACTCCCTGAAGGGCGCCAAGAAGGCTATCCTCCACATCTACCTCGCAACGAGCCCCTGTTTC
CGTCGCATAATCTTCAACATGGACCACAAGCAGAGTCTGGAGATGGCTGTCAAATGCACAAAGTATGCCCGCTCT
ATCACCAAGGACGACCCCTCCCAGGCCGGCACAGATTGGCAATTCGAGTTCTCCCCCGAGACTTTCTCCGATACC
GAGCCCGAGTACGCCGTGGAGGTCTGCCAGGCTGTGAAGGCTGCCTGGGGACCCACGGAGGAGAAGCCCATCATA
TTTAACCTGCCCGCCACGGTAGAGATGGCCACCCCCAACGTCTTTGCTGATCAGGTCGAGTACTTCTGCACAAAC
ATGACTGAGCGCGAGAAGTTTGTTGTCTCAGTCCACCCGCATAACGACCGTGGCTGCGCTGTTGCCGCCGCTGAA
CTGGCACAGATGGCTGGTGCCGATCGTGTAGAGGGTACTCTGTTCGGCAACGGTGAGCGTACCGGAAACGTGGAC
CTGGTTACTCTCGCCCTGAACCTGTACACACAAGGTGTCTCGCCAAACGTCGACTTCTCGGACATCAACTCTGTC
ATCAAGGTGGTAGAGGAGAGCAACAAGATCCCAGTCAACGAGCGTGCACCATATGGTGGTCAGCTCGTGGTGTGC
GCATTCTCTGGAAGGTTCGTTGTCCTTTCTTTTTCCTACGTTATTCGCTTTGCTAACCTATTTCGAATCCAGTCA
CCAAGATGCAATCAAGAAGGGCTTCAAACTGCGCCAAGATGGCGAGGGCGCCGACGAGGAAACCGAGTGGGAAGT
CCCGTACCTCCCCCTGGATCCCCAAGATATCGGCCGTACCTACGAGGCAGTCATCCGTGTCAACTCCCAAAGTGG
CAAGGGTGGCGCCGCCTGGATTATCCTGCGAAGCCTGGAGCTGGATCTCCCTCGCGCTCTGCAGGTCGAGTTCAG
CAAGATCGTGCAGGAGAAGACCGAGGCTGTCAGCCGGGAGCTGAAACCTACCGAGATCGTCAACCTCTTCGAGGA
GGCCTACCACCTCAAGTCAAACCCCCGCTTCACCCTTGTCGACTACAGCATCACCACCGACCGCTCGCAGTCCCC
TGCTCCTCCTGAGCCCGGCAAGGCCCTCAACACCAAGAACCTCAAGCGTCGCTTCACCGGTATTATCGAGATCGA
CAATGTTCAGCATGCCATCACCGGTGTCGGCCCAGGTGCTATTTCCTCCCTGGCTACCGCTCTTTCTACCCTCGG
TATTGATCTCGATGTCCGCGACTACAAGGAACACTCCATTGGTCGCGGTCGCGACACCAAGGCTGCTACCTACAT
TCAGTGCACAGCAGCCGGCAGCAATCAACAGGTGTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCCTCTCT
GATTGCGCTGCTTAGCGCCGCCAGCTCGGTAAGATCTGTTCCTGATTTGTCTGCATCTCACCACTAACATGCGTT
TAGTTCCTCACCTCCCGGGCTGGTTCTCCTGCTCCTTTCCGTCCCATCCGCTCCAACACCCTCACCAACGAGGAC
ATCGAAGCTCTCGAGCAGTTGACCAGCACTCCAGAGGCTGTTACATCTAACGGCGGTCTGAGCGCCAAGGCCAAC
ATCGAACAGCTGACAAAAAAGGCTGAAAATTTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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