© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8688.t1 |
| Gene name | |
| Location | scaffold_36:35817..39023 |
| Strand | + |
| Gene length (bp) | 3206 |
| Transcript length (bp) | 1899 |
| Coding sequence length (bp) | 1899 |
| Protein length (aa) | 633 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 1.6E-21 | 465 | 592 |
| PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 3.6E-21 | 317 | 418 |
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 3.0E-13 | 14 | 194 |
| PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 5.7E-10 | 15 | 153 |
| PF07993 | NAD_binding_4 | Male sterility protein | 1.2E-04 | 79 | 195 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 9.8E-08 | 18 | 134 |
| PF16363 | GDP_Man_Dehyd | GDP-mannose 4,6 dehydratase | 4.8E-07 | 15 | 131 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006694 | steroid biosynthetic process | Yes |
| GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:0009058 | biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0008150 | biological_process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0016229 | steroid dehydrogenase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| Orthofinder run ID | 2 |
| Orthogroup | 4377 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8688.t1 MAQQLYYLPRGSRILVTGANGFIGSNVVHSLLELGYKVRGTVRAPKPWLDEMFRGKFGRDSYESVVLTNFENVDT LVSVMDGVSGVAHVASDVSFSANPEEVVPWVLRAVHNVLEAASRNSAIRRVVMTSSAVTALFPEPNKEGVVVRED SWNDEATKLAYDSDAPPLVKGLYTYAASKTEGEKAAWRWMEKNKPGFQFNTVLPDFTLGRILHEQIHGSTMGWVT GLPKGDTRIFETFVPQYFCDVIDIARLHVAALLDPNTVSRRLFGFAAPINLTDIISVVRKLQPNNTLIPEPPVNE GRDLSENDIPVASPGQNEVLVKLTCTGLCRSELRAVLAWGAYNSIIGHEGVGIVVKAGPDVSESLLGERVGVKWL YSACNKCSVCKRGFPNYCAQQLNTSRHVPGTLQQYVIADARFLTLIPGGVADEVAAPLLCAGLTMVGALSKLDHE LQVGDFIVISGSGGGLGHIGVQIASRIKNLRVIAVDSGDDKRALSLESGAEVFFDYKTEDVVARVREFTGEGAHA TIVVPGTKEALQMAPNLVRNMGFVVNVGLPPNDLDIPLSATLCTARGLTFIGSSVGTEDQLTDLLQAAAAGKIAP SIEVFEFSDVPTLIEKLRDDGIMGRAVITLPQ* |
| Coding | >Pro_DTO377G3_2|g8688.t1 ATGGCTCAGCAACTCTACTATCTGCCGCGCGGCTCGCGCATCCTGGTCACCGGCGCGAACGGCTTCATTGGGAGC AATGTCGTTCACAGTCTGCTTGAACTAGGCTACAAGGTTCGCGGGACTGTCCGCGCACCGAAACCATGGCTCGAT GAGATGTTCCGCGGGAAGTTCGGGCGGGACTCGTATGAGTCTGTTGTTCTTACTAACTTTGAGAACGTGGATACT CTTGTTAGTGTAATGGATGGTGTGTCTGGCGTGGCGCATGTGGCATCAGATGTTAGCTTCAGTGCGAATCCGGAA GAGGTTGTGCCGTGGGTGTTGAGAGCTGTTCATAATGTGCTAGAGGCTGCATCGAGAAATTCCGCTATCCGGCGG GTTGTCATGACCTCTTCTGCGGTCACGGCGTTGTTTCCGGAGCCGAATAAGGAGGGTGTTGTTGTTCGTGAGGAC TCCTGGAATGACGAGGCTACCAAGCTAGCCTATGATTCGGATGCTCCACCACTTGTGAAGGGCCTTTACACTTAT GCTGCCTCCAAGACCGAGGGAGAGAAGGCAGCGTGGAGATGGATGGAGAAGAACAAGCCAGGCTTCCAATTCAAT ACCGTGTTACCGGATTTTACCCTCGGGAGAATCCTACATGAACAGATCCACGGCTCGACAATGGGCTGGGTTACT GGCCTACCCAAAGGTGACACACGTATTTTTGAGACATTTGTGCCGCAATACTTCTGCGATGTTATCGATATTGCG CGTCTACATGTGGCGGCCCTCCTCGACCCAAATACAGTCTCCCGTCGACTCTTCGGATTTGCAGCTCCGATCAAC CTCACTGATATAATCTCAGTCGTTCGAAAGCTCCAGCCTAATAATACATTGATTCCTGAACCTCCTGTTAACGAG GGCCGTGATCTGAGTGAGAATGACATACCCGTCGCAAGTCCTGGACAAAATGAAGTTCTCGTCAAATTAACTTGC ACCGGCCTGTGCCGCTCAGAACTCCGCGCTGTTTTAGCCTGGGGTGCATACAACTCCATCATCGGCCACGAAGGG GTCGGCATTGTAGTAAAAGCAGGGCCCGATGTCTCGGAGTCCCTTCTCGGTGAACGAGTCGGCGTCAAATGGCTC TACAGTGCATGCAACAAATGCTCGGTCTGCAAGCGAGGGTTCCCGAACTATTGCGCACAGCAGCTCAATACAAGT CGCCATGTTCCGGGGACATTGCAGCAGTATGTTATCGCCGATGCGCGGTTCCTGACATTGATCCCCGGGGGCGTA GCCGATGAAGTTGCAGCACCGCTACTGTGCGCTGGACTTACGATGGTTGGTGCTTTGTCGAAACTTGATCATGAG CTGCAGGTGGGTGACTTTATTGTTATTTCGGGGTCTGGGGGAGGTTTGGGCCATATTGGGGTGCAGATTGCATCC AGGATCAAAAATTTGCGGGTTATTGCGGTTGATAGCGGTGATGATAAGAGAGCTTTGAGTTTGGAGTCTGGGGCG GAGGTTTTCTTTGATTACAAGACTGAAGATGTGGTTGCTCGAGTGCGTGAGTTCACTGGGGAGGGTGCGCATGCG ACAATCGTCGTGCCGGGTACGAAGGAAGCATTGCAGATGGCGCCTAACCTGGTGAGAAACATGGGGTTTGTTGTG AATGTTGGGTTGCCACCGAATGACTTGGATATTCCTCTTTCGGCTACACTTTGCACAGCGAGAGGTCTCACCTTT ATAGGGTCATCTGTGGGTACGGAGGATCAATTGACCGACTTACTGCAAGCTGCAGCTGCTGGAAAAATCGCACCA TCGATCGAAGTCTTTGAATTCTCGGACGTGCCGACTTTGATAGAGAAGCTGAGGGATGATGGTATTATGGGACGC GCAGTGATCACTTTGCCACAGTAA |
| Transcript | >Pro_DTO377G3_2|g8688.t1 ATGGCTCAGCAACTCTACTATCTGCCGCGCGGCTCGCGCATCCTGGTCACCGGCGCGAACGGCTTCATTGGGAGC AATGTCGTTCACAGTCTGCTTGAACTAGGCTACAAGGTTCGCGGGACTGTCCGCGCACCGAAACCATGGCTCGAT GAGATGTTCCGCGGGAAGTTCGGGCGGGACTCGTATGAGTCTGTTGTTCTTACTAACTTTGAGAACGTGGATACT CTTGTTAGTGTAATGGATGGTGTGTCTGGCGTGGCGCATGTGGCATCAGATGTTAGCTTCAGTGCGAATCCGGAA GAGGTTGTGCCGTGGGTGTTGAGAGCTGTTCATAATGTGCTAGAGGCTGCATCGAGAAATTCCGCTATCCGGCGG GTTGTCATGACCTCTTCTGCGGTCACGGCGTTGTTTCCGGAGCCGAATAAGGAGGGTGTTGTTGTTCGTGAGGAC TCCTGGAATGACGAGGCTACCAAGCTAGCCTATGATTCGGATGCTCCACCACTTGTGAAGGGCCTTTACACTTAT GCTGCCTCCAAGACCGAGGGAGAGAAGGCAGCGTGGAGATGGATGGAGAAGAACAAGCCAGGCTTCCAATTCAAT ACCGTGTTACCGGATTTTACCCTCGGGAGAATCCTACATGAACAGATCCACGGCTCGACAATGGGCTGGGTTACT GGCCTACCCAAAGGTGACACACGTATTTTTGAGACATTTGTGCCGCAATACTTCTGCGATGTTATCGATATTGCG CGTCTACATGTGGCGGCCCTCCTCGACCCAAATACAGTCTCCCGTCGACTCTTCGGATTTGCAGCTCCGATCAAC CTCACTGATATAATCTCAGTCGTTCGAAAGCTCCAGCCTAATAATACATTGATTCCTGAACCTCCTGTTAACGAG GGCCGTGATCTGAGTGAGAATGACATACCCGTCGCAAGTCCTGGACAAAATGAAGTTCTCGTCAAATTAACTTGC ACCGGCCTGTGCCGCTCAGAACTCCGCGCTGTTTTAGCCTGGGGTGCATACAACTCCATCATCGGCCACGAAGGG GTCGGCATTGTAGTAAAAGCAGGGCCCGATGTCTCGGAGTCCCTTCTCGGTGAACGAGTCGGCGTCAAATGGCTC TACAGTGCATGCAACAAATGCTCGGTCTGCAAGCGAGGGTTCCCGAACTATTGCGCACAGCAGCTCAATACAAGT CGCCATGTTCCGGGGACATTGCAGCAGTATGTTATCGCCGATGCGCGGTTCCTGACATTGATCCCCGGGGGCGTA GCCGATGAAGTTGCAGCACCGCTACTGTGCGCTGGACTTACGATGGTTGGTGCTTTGTCGAAACTTGATCATGAG CTGCAGGTGGGTGACTTTATTGTTATTTCGGGGTCTGGGGGAGGTTTGGGCCATATTGGGGTGCAGATTGCATCC AGGATCAAAAATTTGCGGGTTATTGCGGTTGATAGCGGTGATGATAAGAGAGCTTTGAGTTTGGAGTCTGGGGCG GAGGTTTTCTTTGATTACAAGACTGAAGATGTGGTTGCTCGAGTGCGTGAGTTCACTGGGGAGGGTGCGCATGCG ACAATCGTCGTGCCGGGTACGAAGGAAGCATTGCAGATGGCGCCTAACCTGGTGAGAAACATGGGGTTTGTTGTG AATGTTGGGTTGCCACCGAATGACTTGGATATTCCTCTTTCGGCTACACTTTGCACAGCGAGAGGTCTCACCTTT ATAGGGTCATCTGTGGGTACGGAGGATCAATTGACCGACTTACTGCAAGCTGCAGCTGCTGGAAAAATCGCACCA TCGATCGAAGTCTTTGAATTCTCGGACGTGCCGACTTTGATAGAGAAGCTGAGGGATGATGGTATTATGGGACGC GCAGTGATCACTTTGCCACAGTAA |
| Gene | >Pro_DTO377G3_2|g8688.t1 ATGGCTCAGCAACTCTACTATCTGCCGCGCGGCTCGCGCATCCTGGTCACCGGCGCGAACGGCTTCATTGGGAGC AATGTCGTTCACAGTCTGCTTGAACTAGGCTACAAGGTTCGCGGGACTGTCCGCGCACCGAAACCATGGCTCGAT GAGATGTTCCGCGGGAAGTTCGGGCGGGACTCGTATGAGTCTGTTGTTCTTACTAACTTTGAGAACGTGGATACT CTTGTTAGTGTAATGGATGGTGTGTCTGGCGTGGCGCATGTGGTATGTATTTGGCAGTGGAATTATTCGATGGGT ATGTGCTAATGAGACATTGCGCTGTGTAGGCATCAGATGTTAGCTTCAGTGCGAATCCGGAAGAGGTTGTGCCGT GGGTGTTGAGAGCTGTTCATAATGTGCTAGAGGCTGCATCGAGAAATTCCGCTATCCGGCGGGTTGTCATGACCT CTTCTGCGGTCACGGCGTTGTTTCCGGAGCCGAATAAGGAGGGTGTTGTTGTTCGTGAGGGTGAGAGACCACTTC TTAGAGAAGGGAATGCAAGGATGTATTGGTTAATATTGTATCTAGACTCCTGGAATGACGAGGCTACCAAGCTAG CCTATGATTCGGATGCTCCACCACTTGTGAAGGGCCTTTACACTTATGCTGCCTCCAAGACCGAGGGAGAGAAGG CAGCGTGGAGATGGATGGAGAAGAACAAGCCAGGCTTCCAATTCAATACCGTGTTACCGGATTTTACCGTGAGTT CTATGCCAGGCCATCAAACGTATGATATTGACTTCGATTAGCTCGGGAGAATCCTACATGAACAGATCCACGGCT CGACAATGGGCTGGGTTACTGGCCTACCCAAAGGTGACACACGTATTTTTGAGACATTTGTGCCGCGTAAGTTGA CACTGCTTGATTGTTCGATCATTGCTGATATAAAAAGAATACTTCTGCGATGTTATCGATATTGCGCGTCTACAT GTGGCGGCCCTCCTCGACCCAAATACAGTCTCCCGTCGACTCTTCGGATTTGCAGCTCCGATCAACCTCACTGAT ATAATCTCAGTCGTTCGAAAGCTCCAGCCTAATAATACATTGATTCCTGAACCTCCTGTTAACGAGGGCCGTGAT CTGAGTGAGGTAATCCCGGCTAAGGACGCAGAAAGGCTCCTACGGGAATTCTGTGGGCGAAAAGGGTGGACTTCG TTGGAGGATAGTATTGCCCAGGGACTTGAGGTATCTCGAAGGCCGTTGTGTTCTTTATAGCGTCCCATTGATTTC GCAAATACAATAAGAAATCTTCAAGTTGTTGAGCAGCAATAGTGCAGAACAGGTGACATTCTCCCGAGATCTCAC TCTGCAGTTTCCGACTTTCCACAGACTGCTGGTGCCATCTTTCTCGCTTTCTTCGCCGTCAAAGGTGTTGAAGTA TTCTCTTGAGACAATTTGTAGGCATTTTGGCTGCGTGCAACACGCCCGACTGTTGACTTCGAGAGTCCTCTATCG ACACTAGCCGCAATAGCAGCCCAGCTGGGTCGATCATCTTTCCTCACCAAGCGCGCAGTATAACGCGCAGTTTGA TCACTCAACTTAGAAGGGCGTCTTCGTCCGGGCTTTGAAGACATATCTTTGCGTTCTTGAAAACGCGTTTTCGTA CAGTAAACAGTGGATCGCGCGACGCGAAGATCTTTGGCAATTTTGATGGCTGAATTCCCATTTTGAAGGGCTTTG ATAATTGCTGCACGTGTTATTTCTGATAACTCGCTTGGAGCCGGCTTTTTGGCTTTTGTTGATTGAGACGTGGTG AAGTATCGTTGCAAAGAGACGTAATTCCACCGTCACCTACTTGCCGACATCCTGACCGAAGAGAATCAGTTACCT CGGCAAACCGAACATCTACATGTAAGACCAAAATGTATTCAAACCAGGCTTGAATATCAGTCCTTCCTATTAGAA AAACAAAAAGGCGTGGTTAAAGTGTAATAAACCATTGTGAATATCGGCAGATCTACCCCTCAACAAGAACCACTC CCATCAATGGCAGATTCCACACCTACGCTACAGCAAGCTGCGGTGGTGCAAAACCCAGGAGAAAATGCAACTATC ACTCTTCAGAATGACATACCCGTCGCAAGTCCTGGACAAAATGAAGTTCTCGTCAAATTAACTTGCACCGGCCTG TGGTAAGCGCTTACATTCCGAAATGAATTCACCCTCGAAAAACTAACCCATAACCATCAAAAAAGCCGCTCAGAA CTCCGCGCTGTTTTAGCCTGGGGTGCATACAACTCCATCATCGGCCACGAAGGGGTCGGCATTGTAGTAAAAGCA GGGCCCGATGTCTCGGAGTCCCTTCTCGGTGAACGAGTCGGCGTCAAATGGCTCTACAGTGCATGCAACAAATGC TCGGTCTGCAAGCGAGGGTTCCCGAACTATTGCGCACAGCAGCTCAATACAAGTCGCCATGTTCCGGGGACATTG CAGCAGTATGTTATCGCCGATGCGCGGTTCCTGACATTGATCCCCGGGGGCGTAGCCGATGAAGTTGCAGCACCG CTACTGTGCGCTGGACTTACGATGGTTGGTGCTTTGTCGAAACTTGATCATGAGCTGCAGGTGGGTGACTTTATT GTTATTTCGGGGTCTGGGGGAGGTTTGGGCCATATTGGGGTGCAGATTGCATCCAGGATCAAAAATTTGCGGGTT ATTGCGGTTGATAGCGGTGATGATAAGAGAGCTTTGAGTTTGGAGTCTGGGGCGGAGGTTTTCTTTGATTACAAG ACTGAAGATGTGGTTGCTCGAGTGCGTGAGTTCACTGGGGAGGGTGCGCATGCGACAATCGTCGTGCCGGGTACG AAGGAAGCATTGCAGATGGCGCCTAACCTGGTGAGAAACATGGGGTTTGTTGTGAATGTTGGGTTGCCACCGAAT GACTTGGATATTCCTCTTTCGGCTACACTTTGCACAGCGAGAGGTAAGATGACGGTGGTCTCATAGTCAATCATA TACTAACTCTCACAACGATAGGTCTCACCTTTATAGGGTCATCTGTGGGTACGGAGGATCAATTGACCGACTTAC TGCAAGCTGCAGCTGCTGGAAAAATCGCACCATCGATCGAAGTCTTTGAATTCTCGGACGTGCCGACTTTGATAG AGAAGCTGAGGGATGATGGTATTATGGGACGCGCAGTGATCACTTTGCCACAGTAA |