Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8673.t1
Gene name
Locationscaffold_36:6798..8357
Strand-
Gene length (bp)1559
Transcript length (bp)1455
Coding sequence length (bp)1455
Protein length (aa) 485

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 4.3E-14 350 400

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005488 binding No
GO:0005515 protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8673.t1
MDPAVAHRPWEAVSGPQSTAGSTQTLPSISTLTANMPGTGAPAEKSPGNGSLNTIERDSGNWSMPQSTRSSTYST
ATNGTGNNYPSLSFISASQPSPNRGHPAVDRSPYPHDQSTTPSSAGTQQPSPNFGQPNSTLPSINQNYEAPSQRV
SVAETIESRRSSVDSRMNQGISSLAINPASPYHSTNASQSSIVSSLQRERGIPTDMNSYRGPRYSGGNQPLSPLG
PRATDQQRSFAAGRTAPAISSNPRSEIYNAEAPTAGMAYAFPDPAVARSSSVSSKGESNPAFSRKGSMAESMNSM
YSERMPRGQHDLPQNVHHHHSLQHKAVRELIGEEDGPPGSTPYSRTPELRVTHKLAERKRRSEMKDCFEALRLRL
PPGQTNKSSKWETLTRAIDYIAMLEKTVAQSQRDRAVMQSEIDEMRAQLQQANGVPRPMFDHHQMNSQVNGQGPY
NGFGNAVTQEQPRTLPPLMNGSSAPMQGIEYERR*
Coding >Pro_DTO377G3_2|g8673.t1
ATGGATCCTGCTGTCGCACATCGCCCATGGGAGGCAGTCTCAGGGCCTCAGTCGACTGCAGGCTCCACGCAAACT
CTCCCATCTATCTCAACCCTCACCGCAAATATGCCAGGGACCGGGGCCCCCGCCGAGAAATCCCCCGGGAATGGT
TCGCTGAATACAATTGAGCGTGACTCCGGGAATTGGTCAATGCCGCAAAGCACAAGATCGTCTACCTACTCTACA
GCGACCAATGGCACCGGCAACAACTATCCCTCCCTCAGCTTTATCTCCGCGTCGCAACCCTCTCCGAATCGCGGA
CATCCGGCTGTCGACCGCTCCCCTTATCCCCACGATCAATCCACCACCCCTTCCTCCGCTGGCACTCAACAACCC
TCTCCCAACTTCGGCCAGCCGAATTCCACCCTCCCTTCAATCAACCAGAACTACGAAGCTCCCTCCCAACGAGTG
AGCGTGGCCGAGACCATTGAGTCTCGGCGCAGCAGTGTCGACAGTCGCATGAACCAAGGGATCAGTTCTCTGGCA
ATCAACCCGGCCTCGCCCTACCACAGCACCAATGCCTCCCAATCATCCATCGTTTCAAGTCTACAAAGGGAGCGA
GGGATTCCGACCGACATGAATTCATACCGGGGACCTCGGTACTCAGGAGGGAACCAGCCACTCTCTCCGCTAGGC
CCTCGCGCAACCGACCAGCAGCGGAGTTTTGCAGCCGGTCGCACTGCTCCGGCCATTTCCTCGAATCCTCGGTCG
GAGATTTACAATGCTGAAGCACCCACGGCGGGTATGGCATATGCCTTCCCGGACCCGGCCGTGGCGCGCTCAAGC
TCTGTCAGCTCGAAGGGAGAATCCAACCCTGCGTTTTCCCGGAAGGGAAGTATGGCGGAGTCTATGAATAGCATG
TACTCGGAACGGATGCCACGAGGTCAACACGACCTACCCCAAAATGTACACCACCACCACTCCCTCCAACACAAG
GCAGTAAGAGAGTTGATCGGCGAAGAAGACGGTCCGCCCGGCAGCACACCGTACAGCCGTACGCCCGAACTGCGC
GTAACGCACAAACTAGCCGAGCGCAAACGGCGAAGCGAGATGAAAGACTGCTTCGAAGCGCTCCGGCTGCGTCTA
CCGCCCGGGCAAACCAACAAATCCAGCAAATGGGAGACGCTCACACGGGCAATTGATTACATAGCAATGCTGGAG
AAAACCGTCGCGCAATCGCAGCGCGACCGGGCCGTTATGCAGTCCGAGATAGATGAGATGCGCGCTCAGCTCCAG
CAAGCCAACGGCGTCCCCCGCCCCATGTTCGACCACCACCAAATGAACTCCCAGGTCAATGGCCAGGGCCCCTAC
AACGGGTTCGGCAATGCCGTGACCCAGGAGCAGCCGCGTACGCTACCGCCTCTTATGAACGGCTCCAGTGCGCCT
ATGCAGGGCATTGAGTATGAGCGACGGTAG
Transcript >Pro_DTO377G3_2|g8673.t1
ATGGATCCTGCTGTCGCACATCGCCCATGGGAGGCAGTCTCAGGGCCTCAGTCGACTGCAGGCTCCACGCAAACT
CTCCCATCTATCTCAACCCTCACCGCAAATATGCCAGGGACCGGGGCCCCCGCCGAGAAATCCCCCGGGAATGGT
TCGCTGAATACAATTGAGCGTGACTCCGGGAATTGGTCAATGCCGCAAAGCACAAGATCGTCTACCTACTCTACA
GCGACCAATGGCACCGGCAACAACTATCCCTCCCTCAGCTTTATCTCCGCGTCGCAACCCTCTCCGAATCGCGGA
CATCCGGCTGTCGACCGCTCCCCTTATCCCCACGATCAATCCACCACCCCTTCCTCCGCTGGCACTCAACAACCC
TCTCCCAACTTCGGCCAGCCGAATTCCACCCTCCCTTCAATCAACCAGAACTACGAAGCTCCCTCCCAACGAGTG
AGCGTGGCCGAGACCATTGAGTCTCGGCGCAGCAGTGTCGACAGTCGCATGAACCAAGGGATCAGTTCTCTGGCA
ATCAACCCGGCCTCGCCCTACCACAGCACCAATGCCTCCCAATCATCCATCGTTTCAAGTCTACAAAGGGAGCGA
GGGATTCCGACCGACATGAATTCATACCGGGGACCTCGGTACTCAGGAGGGAACCAGCCACTCTCTCCGCTAGGC
CCTCGCGCAACCGACCAGCAGCGGAGTTTTGCAGCCGGTCGCACTGCTCCGGCCATTTCCTCGAATCCTCGGTCG
GAGATTTACAATGCTGAAGCACCCACGGCGGGTATGGCATATGCCTTCCCGGACCCGGCCGTGGCGCGCTCAAGC
TCTGTCAGCTCGAAGGGAGAATCCAACCCTGCGTTTTCCCGGAAGGGAAGTATGGCGGAGTCTATGAATAGCATG
TACTCGGAACGGATGCCACGAGGTCAACACGACCTACCCCAAAATGTACACCACCACCACTCCCTCCAACACAAG
GCAGTAAGAGAGTTGATCGGCGAAGAAGACGGTCCGCCCGGCAGCACACCGTACAGCCGTACGCCCGAACTGCGC
GTAACGCACAAACTAGCCGAGCGCAAACGGCGAAGCGAGATGAAAGACTGCTTCGAAGCGCTCCGGCTGCGTCTA
CCGCCCGGGCAAACCAACAAATCCAGCAAATGGGAGACGCTCACACGGGCAATTGATTACATAGCAATGCTGGAG
AAAACCGTCGCGCAATCGCAGCGCGACCGGGCCGTTATGCAGTCCGAGATAGATGAGATGCGCGCTCAGCTCCAG
CAAGCCAACGGCGTCCCCCGCCCCATGTTCGACCACCACCAAATGAACTCCCAGGTCAATGGCCAGGGCCCCTAC
AACGGGTTCGGCAATGCCGTGACCCAGGAGCAGCCGCGTACGCTACCGCCTCTTATGAACGGCTCCAGTGCGCCT
ATGCAGGGCATTGAGTATGAGCGACGGTAG
Gene >Pro_DTO377G3_2|g8673.t1
ATGGATCCTGCTGTCGCACATCGCCCATGGGAGGCAGTCTCAGGGCCTCAGTCGACTGCAGGCTCCACGCAAACT
CTCCCATCTATCTCAACCCTCACCGCAAATATGCCAGGGACCGGGGCCCCCGCCGAGAAATCCCCCGGGAATGGT
TCGCTGAATACAATTGAGCGTGACTCCGGGAATTGGTCAATGCCGCAAAGCACAAGTAGGAAACCCTCGCCCAGT
ACGGAATGGGAGCGGCGCGGTGCTGACCATGTAGGATCGTCTACCTACTCTACAGCGACCAATGGCACCGGCAAC
AACTATCCCTCCCTCAGCTTTATCTCCGCGTCGCAACCCTCTCCGAATCGCGGACATCCGGCTGTCGACCGCTCC
CCTTATCCCCACGATCAATCCACCACCCCTTCCTCCGCTGGCACTCAACAACCCTCTCCCAACTTCGGCCAGCCG
AATTCCACCCTCCCTTCAATCAACCAGAACTACGAAGCTCCCTCCCAACGAGTGAGCGTGGCCGAGACCATTGAG
TCTCGGCGCAGCAGTGTCGACAGTCGCATGAACCAAGGGATCAGTTCTCTGGCAATCAACCCGGCCTCGCCCTAC
CACAGCACCAATGCCTCCCAATCATCCATCGTTTCAAGTCTACAAAGGGAGCGAGGGATTCCGACCGACATGAAT
TCATACCGGGGACCTCGGTACTCAGGAGGGAACCAGCCACTCTCTCCGCTAGGCCCTCGCGCAACCGACCAGCAG
CGGAGTTTTGCAGCCGGTCGCACTGCTCCGGCCATTTCCTCGAATCCTCGGTCGGAGATTTACAATGCTGAAGCA
CCCACGGCGGGTATGGCATATGCCTTCCCGGACCCGGCCGTGGCGCGCTCAAGCTCTGTCAGCTCGAAGGGAGAA
TCCAACCCTGCGTTTTCCCGGAAGGGAAGTATGGCGGAGTCTATGAATAGCATGTACTCGGAACGGATGCCACGA
GGTCAACACGGTAAGAACCTGCGCAAGACATCCTGCACGCGCAATACTAACAATCTCCAGACCTACCCCAAAATG
TACACCACCACCACTCCCTCCAACACAAGGCAGTAAGAGAGTTGATCGGCGAAGAAGACGGTCCGCCCGGCAGCA
CACCGTACAGCCGTACGCCCGAACTGCGCGTAACGCACAAACTAGCCGAGCGCAAACGGCGAAGCGAGATGAAAG
ACTGCTTCGAAGCGCTCCGGCTGCGTCTACCGCCCGGGCAAACCAACAAATCCAGCAAATGGGAGACGCTCACAC
GGGCAATTGATTACATAGCAATGCTGGAGAAAACCGTCGCGCAATCGCAGCGCGACCGGGCCGTTATGCAGTCCG
AGATAGATGAGATGCGCGCTCAGCTCCAGCAAGCCAACGGCGTCCCCCGCCCCATGTTCGACCACCACCAAATGA
ACTCCCAGGTCAATGGCCAGGGCCCCTACAACGGGTTCGGCAATGCCGTGACCCAGGAGCAGCCGCGTACGCTAC
CGCCTCTTATGAACGGCTCCAGTGCGCCTATGCAGGGCATTGAGTATGAGCGACGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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