Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g8658.t1
Gene name
Location	scaffold_35:195314..197785
Strand	-
Gene length (bp)	2471
Transcript length (bp)	2361
Coding sequence length (bp)	2361
Protein length (aa)	787

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	7.4E-15	366	508
PF17872	AAA_lid_10	AAA lid domain	4.5E-11	539	573
PF13401	AAA_22	AAA domain	6.4E-09	362	473
PF13191	AAA_16	AAA ATPase domain	7.6E-08	340	436

GO

GO Term	Description	Terminal node
GO:0016887	ATP hydrolysis activity	Yes
GO:0005524	ATP binding	Yes
GO:0005488	binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0043167	ion binding	No
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0016462	pyrophosphatase activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0016787	hydrolase activity	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0016817	hydrolase activity, acting on acid anhydrides	No
GO:1901265	nucleoside phosphate binding	No
GO:0017111	nucleoside-triphosphatase activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	15.64	8.41	22.88
5d_25C	Five days - 25 degrees Celsius	10.75	5.31	16.19
7d_25C	Seven days - 25 degrees Celsius	12.14	6.14	18.14
10d_25C	Ten days - 25 degrees Celsius	7.49	3.33	11.66
7d_15C	Seven days - 15 degrees Celsius	9.42	4.45	14.39
7d_30C	Seven days - 30 degrees Celsius	9.68	4.65	14.72

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.172783	no
3d_25C	7d_25C	0.391078	no
3d_25C	7d_15C	0.057587	no
3d_25C	7d_30C	0.074740	no
3d_25C	10d_25C	0.006000	yes
5d_25C	7d_25C	0.737972	no
5d_25C	7d_15C	0.724100	no
5d_25C	7d_30C	0.786691	no
5d_25C	10d_25C	0.243809	no
7d_25C	7d_15C	0.414121	no
7d_25C	7d_30C	0.486211	no
7d_25C	10d_25C	0.091203	no
7d_15C	7d_30C	0.952450	no
7d_15C	10d_25C	0.516058	no
7d_30C	10d_25C	0.456934	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8658.t1 MSDSDSDSSPQRRSARERAQWMTKGALVRDDSDDELGVEDLPWEWIYDTTEETTQETEANHDTPAKRSRRRSRPA RQKRKIIGAHMGQFQCKVGDVILLKSPEAGKDWVGIITEFLEEEDEDQEDEVVKSANIMWFASPDEFMGTRNKRR TDALPNEQYITLDFNSNPLTSISGKGAVMSQSIFNAKYPNGPPKNKTELAEYNKCIVCRRGVNQVQGRYTEEFVW EEMYNENNIQDLISWVRDGLKASRKRKAADDEYVDTKEITVPATPRKKQRLAATNATPQSQRKKALMTPTHKRIV VKKPLEFTPLGTRVLSPTHFDSPYRQARNLLHVSTVPDSLPCRKTEFNTVYNHLSAAIMEGTGACIYISGTPGTG KTATVREVVAQLNGAVHAEEMDDFIFVEINGMKVTDPHQSYSLLWEALKGDRVSPSHALDLLEREFSNPSPRRVS CVVLMDELDQLVTKNQSVMYNFFNWPALRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYRHTDLMEI ISTRLASVPGNIVDPDAVQFASRKVAAVSGDARRALDICRRAVEIAEQAADEAAAADEAKDETESLPPTPSKTPG RRNKAVAVKAAGESTIAKPPAKGQPGRVTIATIKQAIHEATSTPLQQSLRCLPLSGKLFLAALLARVHRTGISES TFGDVLDEARRIADAAVAIAGAAGAGVKDFLLGGGPTARVRSLGYAAMLLMNSGVLALEQGSGSKSVLGGTTIPT RGDRSSKVRLRVAAEDVRSAFREDAEAKGFGLGIER*
Coding	>Pro_DTO377G3_2\|g8658.t1 ATGAGCGATAGCGATTCAGACTCTTCGCCTCAAAGGCGCAGTGCCCGTGAACGCGCCCAATGGATGACCAAGGGA GCTCTGGTTCGAGACGACTCTGATGATGAACTAGGCGTCGAGGACCTTCCATGGGAGTGGATTTACGACACAACT GAGGAAACTACCCAAGAGACCGAGGCCAACCATGATACCCCGGCGAAACGCAGCCGAAGACGATCCCGTCCAGCG CGCCAAAAACGCAAAATCATTGGCGCACACATGGGTCAATTCCAATGCAAAGTCGGTGATGTGATTCTTTTGAAA TCCCCTGAAGCTGGAAAGGACTGGGTTGGCATTATTACGGAATTTTTGGAGGAGGAGGATGAAGATCAAGAAGAC GAGGTTGTCAAATCCGCCAATATTATGTGGTTCGCATCCCCCGACGAATTTATGGGCACGAGGAACAAGCGCAGG ACCGATGCCTTGCCCAACGAACAGTACATCACACTCGATTTCAACAGCAACCCCTTGACATCAATCAGCGGGAAG GGGGCAGTCATGTCTCAGAGTATCTTCAATGCCAAATACCCGAATGGACCTCCAAAGAACAAGACTGAATTGGCG GAATATAACAAGTGCATTGTCTGTCGACGAGGCGTGAACCAGGTTCAAGGACGGTACACCGAGGAGTTTGTCTGG GAGGAGATGTACAACGAAAACAACATCCAAGATCTGATCAGCTGGGTCAGGGATGGCTTGAAGGCTTCCAGGAAA CGCAAGGCTGCGGACGATGAATATGTCGATACCAAAGAGATCACGGTGCCTGCGACCCCGAGAAAGAAACAACGA CTAGCAGCAACGAATGCCACGCCACAATCACAGCGAAAGAAGGCCCTGATGACCCCAACCCATAAACGGATTGTC GTAAAAAAACCACTTGAGTTTACTCCTCTGGGTACCCGTGTCCTCTCACCCACGCATTTTGACTCTCCTTACCGT CAGGCTCGGAATTTACTACACGTCTCCACTGTTCCAGACTCATTACCGTGCCGGAAGACCGAGTTCAACACTGTA TACAACCATCTTAGCGCTGCGATCATGGAAGGCACAGGCGCTTGTATCTATATCTCTGGTACTCCGGGCACTGGC AAGACTGCCACAGTGCGTGAGGTGGTTGCGCAGCTAAACGGTGCCGTGCATGCAGAAGAGATGGACGATTTCATC TTTGTCGAGATTAACGGCATGAAAGTCACGGACCCGCATCAATCCTACTCCTTACTATGGGAAGCCTTGAAGGGC GACCGAGTATCACCTTCCCACGCATTGGATCTTCTCGAAAGAGAATTCTCAAATCCCTCCCCTCGTCGAGTCTCC TGCGTTGTGCTCATGGACGAATTGGATCAGCTTGTCACAAAGAATCAGTCTGTCATGTATAACTTCTTCAACTGG CCTGCTCTCCGCCATTCGCGCCTCATTGTCCTGGCTGTTGCAAACACCATGGATCTCCCTGAAAGAACCCTAAGC AACAAAATATCCAGTCGTCTCGGTTTAACCCGTATCACATTCCCGGGATACCGTCACACAGATCTAATGGAAATC ATCAGTACCCGCCTGGCCAGTGTACCGGGCAATATCGTTGACCCAGACGCCGTTCAATTCGCAAGTCGCAAAGTA GCCGCTGTCAGTGGCGATGCTCGACGAGCCTTAGACATCTGCCGTCGGGCCGTTGAAATCGCCGAGCAAGCAGCC GATGAGGCGGCTGCCGCGGATGAGGCCAAAGACGAGACAGAATCATTGCCTCCTACGCCCAGCAAAACCCCCGGC CGGCGTAACAAGGCTGTCGCAGTCAAAGCAGCCGGAGAATCAACCATCGCTAAACCTCCTGCAAAGGGTCAGCCG GGGCGCGTCACTATCGCCACTATCAAGCAAGCTATTCACGAAGCTACATCAACTCCACTCCAACAATCATTGCGC TGCCTCCCGCTGTCAGGGAAGCTCTTCCTCGCTGCCCTACTAGCCCGCGTCCACCGAACTGGCATTTCGGAATCT ACATTTGGCGACGTCCTTGACGAAGCCCGCCGCATCGCCGATGCAGCCGTCGCCATTGCTGGAGCCGCAGGCGCC GGCGTGAAAGATTTCCTACTGGGCGGAGGCCCCACTGCTCGCGTGCGGAGCCTGGGCTATGCAGCTATGTTGCTC ATGAACTCGGGTGTCCTGGCACTGGAGCAAGGCTCTGGCTCTAAAAGCGTGCTCGGGGGTACTACGATCCCCACT CGCGGCGACCGGAGTAGTAAAGTTCGGCTCAGAGTTGCAGCGGAAGATGTCAGGTCCGCTTTCAGGGAGGATGCG GAGGCTAAGGGCTTTGGTTTGGGTATTGAGCGGTGA
Transcript	>Pro_DTO377G3_2\|g8658.t1 ATGAGCGATAGCGATTCAGACTCTTCGCCTCAAAGGCGCAGTGCCCGTGAACGCGCCCAATGGATGACCAAGGGA GCTCTGGTTCGAGACGACTCTGATGATGAACTAGGCGTCGAGGACCTTCCATGGGAGTGGATTTACGACACAACT GAGGAAACTACCCAAGAGACCGAGGCCAACCATGATACCCCGGCGAAACGCAGCCGAAGACGATCCCGTCCAGCG CGCCAAAAACGCAAAATCATTGGCGCACACATGGGTCAATTCCAATGCAAAGTCGGTGATGTGATTCTTTTGAAA TCCCCTGAAGCTGGAAAGGACTGGGTTGGCATTATTACGGAATTTTTGGAGGAGGAGGATGAAGATCAAGAAGAC GAGGTTGTCAAATCCGCCAATATTATGTGGTTCGCATCCCCCGACGAATTTATGGGCACGAGGAACAAGCGCAGG ACCGATGCCTTGCCCAACGAACAGTACATCACACTCGATTTCAACAGCAACCCCTTGACATCAATCAGCGGGAAG GGGGCAGTCATGTCTCAGAGTATCTTCAATGCCAAATACCCGAATGGACCTCCAAAGAACAAGACTGAATTGGCG GAATATAACAAGTGCATTGTCTGTCGACGAGGCGTGAACCAGGTTCAAGGACGGTACACCGAGGAGTTTGTCTGG GAGGAGATGTACAACGAAAACAACATCCAAGATCTGATCAGCTGGGTCAGGGATGGCTTGAAGGCTTCCAGGAAA CGCAAGGCTGCGGACGATGAATATGTCGATACCAAAGAGATCACGGTGCCTGCGACCCCGAGAAAGAAACAACGA CTAGCAGCAACGAATGCCACGCCACAATCACAGCGAAAGAAGGCCCTGATGACCCCAACCCATAAACGGATTGTC GTAAAAAAACCACTTGAGTTTACTCCTCTGGGTACCCGTGTCCTCTCACCCACGCATTTTGACTCTCCTTACCGT CAGGCTCGGAATTTACTACACGTCTCCACTGTTCCAGACTCATTACCGTGCCGGAAGACCGAGTTCAACACTGTA TACAACCATCTTAGCGCTGCGATCATGGAAGGCACAGGCGCTTGTATCTATATCTCTGGTACTCCGGGCACTGGC AAGACTGCCACAGTGCGTGAGGTGGTTGCGCAGCTAAACGGTGCCGTGCATGCAGAAGAGATGGACGATTTCATC TTTGTCGAGATTAACGGCATGAAAGTCACGGACCCGCATCAATCCTACTCCTTACTATGGGAAGCCTTGAAGGGC GACCGAGTATCACCTTCCCACGCATTGGATCTTCTCGAAAGAGAATTCTCAAATCCCTCCCCTCGTCGAGTCTCC TGCGTTGTGCTCATGGACGAATTGGATCAGCTTGTCACAAAGAATCAGTCTGTCATGTATAACTTCTTCAACTGG CCTGCTCTCCGCCATTCGCGCCTCATTGTCCTGGCTGTTGCAAACACCATGGATCTCCCTGAAAGAACCCTAAGC AACAAAATATCCAGTCGTCTCGGTTTAACCCGTATCACATTCCCGGGATACCGTCACACAGATCTAATGGAAATC ATCAGTACCCGCCTGGCCAGTGTACCGGGCAATATCGTTGACCCAGACGCCGTTCAATTCGCAAGTCGCAAAGTA GCCGCTGTCAGTGGCGATGCTCGACGAGCCTTAGACATCTGCCGTCGGGCCGTTGAAATCGCCGAGCAAGCAGCC GATGAGGCGGCTGCCGCGGATGAGGCCAAAGACGAGACAGAATCATTGCCTCCTACGCCCAGCAAAACCCCCGGC CGGCGTAACAAGGCTGTCGCAGTCAAAGCAGCCGGAGAATCAACCATCGCTAAACCTCCTGCAAAGGGTCAGCCG GGGCGCGTCACTATCGCCACTATCAAGCAAGCTATTCACGAAGCTACATCAACTCCACTCCAACAATCATTGCGC TGCCTCCCGCTGTCAGGGAAGCTCTTCCTCGCTGCCCTACTAGCCCGCGTCCACCGAACTGGCATTTCGGAATCT ACATTTGGCGACGTCCTTGACGAAGCCCGCCGCATCGCCGATGCAGCCGTCGCCATTGCTGGAGCCGCAGGCGCC GGCGTGAAAGATTTCCTACTGGGCGGAGGCCCCACTGCTCGCGTGCGGAGCCTGGGCTATGCAGCTATGTTGCTC ATGAACTCGGGTGTCCTGGCACTGGAGCAAGGCTCTGGCTCTAAAAGCGTGCTCGGGGGTACTACGATCCCCACT CGCGGCGACCGGAGTAGTAAAGTTCGGCTCAGAGTTGCAGCGGAAGATGTCAGGTCCGCTTTCAGGGAGGATGCG GAGGCTAAGGGCTTTGGTTTGGGTATTGAGCGGTGA
Gene	>Pro_DTO377G3_2\|g8658.t1 ATGAGCGATAGCGATTCAGACTCTTCGCCTCAAAGGCGCAGTGCCCGTGAACGCGCCCAATGGATGACCAAGGGA GCTCTGGTTCGAGACGACTCTGATGATGAACTAGGCGTCGAGGACCTTCCATGGGAGTGGATTTACGACACAACT GAGGAAACTACCCAAGAGACCGAGGCCAACCATGATACCCCGGCGAAACGCAGCCGAAGACGATCCCGTCCAGCG CGCCAAAAACGCAAAATCATTGGCGCACACATGGGTCAATTCCAATGCAAAGTCGGTGATGTGATTCTTTTGAAA TCCCCTGAAGCTGGAAAGGACTGGGTTGGCATTATTACGGAATTTTTGGAGGAGGAGGATGAAGATCAAGAAGAC GAGGTTGTCAAATCCGCCAATATTATGTGGTTCGCATCCCCCGACGAATTTATGGGCACGAGGAACAAGCGCAGG ACCGATGCCTTGCCCAACGAACAGTACATCACACTCGATTTCAACAGCAACCCCTTGACATCAATCAGCGGGAAG GGGGCAGTCATGTCTCAGAGTATCTTCAATGCCAAATACCCGAATGGACCTCCAAAGAACAAGACTGAATTGGCG GAATATAACAAGTGCATTGTCTGTCGACGAGGCGTGAACCAGGTTCAAGGACGGTACACCGAGGAGTTTGTCTGG GAGGAGATGTACAACGAAAACAACATCCAAGATCTGATCAGCTGGGTCAGGGATGGCTTGAAGGCTTCCAGGAAA CGCAAGGCTGCGGACGATGAAGTGAGTTAAACCACACGGTTCCAACTGCAAACCAGCGCTGATTTGGACCATTAC AGTATGTCGATACCAAAGAGATCACGGTGCCTGCGACCCCGAGAAAGAAACAACGACTAGCAGCAACGAATGCCA CGCCACAATCACAGCGAAAGAAGGCCCTGATGACCCCAACCCATAAACGGTAGGAAACAGCGAGATTGAATGTGT GTCATAAAATAAGACTAACATGTATCAGGATTGTCGTAAAAAAACCACTTGAGTTTACTCCTCTGGGTACCCGTG TCCTCTCACCCACGCATTTTGACTCTCCTTACCGTCAGGCTCGGAATTTACTACACGTCTCCACTGTTCCAGACT CATTACCGTGCCGGAAGACCGAGTTCAACACTGTATACAACCATCTTAGCGCTGCGATCATGGAAGGCACAGGCG CTTGTATCTATATCTCTGGTACTCCGGGCACTGGCAAGACTGCCACAGTGCGTGAGGTGGTTGCGCAGCTAAACG GTGCCGTGCATGCAGAAGAGATGGACGATTTCATCTTTGTCGAGATTAACGGCATGAAAGTCACGGACCCGCATC AATCCTACTCCTTACTATGGGAAGCCTTGAAGGGCGACCGAGTATCACCTTCCCACGCATTGGATCTTCTCGAAA GAGAATTCTCAAATCCCTCCCCTCGTCGAGTCTCCTGCGTTGTGCTCATGGACGAATTGGATCAGCTTGTCACAA AGAATCAGTCTGTCATGTATAACTTCTTCAACTGGCCTGCTCTCCGCCATTCGCGCCTCATTGTCCTGGCTGTTG CAAACACCATGGATCTCCCTGAAAGAACCCTAAGCAACAAAATATCCAGTCGTCTCGGTTTAACCCGTATCACAT TCCCGGGATACCGTCACACAGATCTAATGGAAATCATCAGTACCCGCCTGGCCAGTGTACCGGGCAATATCGTTG ACCCAGACGCCGTTCAATTCGCAAGTCGCAAAGTAGCCGCTGTCAGTGGCGATGCTCGACGAGCCTTAGACATCT GCCGTCGGGCCGTTGAAATCGCCGAGCAAGCAGCCGATGAGGCGGCTGCCGCGGATGAGGCCAAAGACGAGACAG AATCATTGCCTCCTACGCCCAGCAAAACCCCCGGCCGGCGTAACAAGGCTGTCGCAGTCAAAGCAGCCGGAGAAT CAACCATCGCTAAACCTCCTGCAAAGGGTCAGCCGGGGCGCGTCACTATCGCCACTATCAAGCAAGCTATTCACG AAGCTACATCAACTCCACTCCAACAATCATTGCGCTGCCTCCCGCTGTCAGGGAAGCTCTTCCTCGCTGCCCTAC TAGCCCGCGTCCACCGAACTGGCATTTCGGAATCTACATTTGGCGACGTCCTTGACGAAGCCCGCCGCATCGCCG ATGCAGCCGTCGCCATTGCTGGAGCCGCAGGCGCCGGCGTGAAAGATTTCCTACTGGGCGGAGGCCCCACTGCTC GCGTGCGGAGCCTGGGCTATGCAGCTATGTTGCTCATGAACTCGGGTGTCCTGGCACTGGAGCAAGGCTCTGGCT CTAAAAGCGTGCTCGGGGGTACTACGATCCCCACTCGCGGCGACCGGAGTAGTAAAGTTCGGCTCAGAGTTGCAG CGGAAGATGTCAGGTCCGCTTTCAGGGAGGATGCGGAGGCTAAGGGCTTTGGTTTGGGTATTGAGCGGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences