Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8646.t1
Gene name
Locationscaffold_35:171116..172190
Strand-
Gene length (bp)1074
Transcript length (bp)708
Coding sequence length (bp)708
Protein length (aa) 236

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 31 0.45

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 50 68 18
3 80 102 22
4 112 134 22
5 147 164 17
6 179 201 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8646.t1
MDMDELNHPAINIWTFFALAVLDIAVNAAAGPAAVATAAHVNGSPLTARALQLGALAGVTKSGVLAFIEFAGYAG
LPTPAWILLALVASGFGTCVLVTAEISNLVLGETPSALLIAAVVAAIPLSGECMGIYQSAGGLYGGKPQTQLCVM
GFNALGGYVFARMAHNGGYDVCPYSVAAAAGAVYGVITGFFHVILGCLAGFTHYESTNGEYEIRNVFGVARGYNP
NWARNVGHGV*
Coding >Pro_DTO377G3_2|g8646.t1
ATGGATATGGACGAGCTCAATCATCCTGCTATTAACATATGGACGTTCTTCGCCTTGGCTGTGCTAGACATTGCA
GTAAACGCTGCCGCCGGTCCAGCTGCAGTGGCGACCGCCGCGCATGTCAATGGGAGCCCACTGACAGCGAGAGCA
CTACAACTCGGTGCGCTCGCTGGAGTCACTAAATCAGGGGTGTTAGCATTTATCGAATTCGCAGGGTACGCGGGC
TTGCCAACGCCCGCGTGGATACTGTTGGCTCTGGTGGCAAGTGGCTTTGGAACTTGTGTCCTGGTCACGGCGGAG
ATTAGCAATTTGGTTCTTGGAGAAACACCAAGCGCATTGCTTATTGCGGCTGTTGTCGCTGCTATTCCCCTCTCG
GGAGAATGTATGGGGATATATCAATCGGCTGGGGGGCTATATGGTGGCAAACCTCAGACACAACTTTGTGTTATG
GGGTTCAATGCCTTGGGAGGATACGTCTTTGCTCGTATGGCACATAACGGAGGCTACGATGTCTGCCCTTACAGT
GTTGCTGCCGCAGCTGGGGCTGTTTACGGTGTCATCACCGGCTTCTTCCATGTCATCCTTGGTTGTCTAGCCGGA
TTCACCCACTATGAAAGCACAAATGGGGAATATGAGATACGGAATGTATTTGGGGTTGCGCGAGGGTATAATCCC
AATTGGGCACGAAATGTCGGGCATGGAGTCTGA
Transcript >Pro_DTO377G3_2|g8646.t1
ATGGATATGGACGAGCTCAATCATCCTGCTATTAACATATGGACGTTCTTCGCCTTGGCTGTGCTAGACATTGCA
GTAAACGCTGCCGCCGGTCCAGCTGCAGTGGCGACCGCCGCGCATGTCAATGGGAGCCCACTGACAGCGAGAGCA
CTACAACTCGGTGCGCTCGCTGGAGTCACTAAATCAGGGGTGTTAGCATTTATCGAATTCGCAGGGTACGCGGGC
TTGCCAACGCCCGCGTGGATACTGTTGGCTCTGGTGGCAAGTGGCTTTGGAACTTGTGTCCTGGTCACGGCGGAG
ATTAGCAATTTGGTTCTTGGAGAAACACCAAGCGCATTGCTTATTGCGGCTGTTGTCGCTGCTATTCCCCTCTCG
GGAGAATGTATGGGGATATATCAATCGGCTGGGGGGCTATATGGTGGCAAACCTCAGACACAACTTTGTGTTATG
GGGTTCAATGCCTTGGGAGGATACGTCTTTGCTCGTATGGCACATAACGGAGGCTACGATGTCTGCCCTTACAGT
GTTGCTGCCGCAGCTGGGGCTGTTTACGGTGTCATCACCGGCTTCTTCCATGTCATCCTTGGTTGTCTAGCCGGA
TTCACCCACTATGAAAGCACAAATGGGGAATATGAGATACGGAATGTATTTGGGGTTGCGCGAGGGTATAATCCC
AATTGGGCACGAAATGTCGGGCATGGAGTCTGA
Gene >Pro_DTO377G3_2|g8646.t1
ATGGATATGGACGAGCTCAATCATCCTGCTATTAACAGTAAGTGTCATGTTTTGGACCCAGAGGAAATCAGAATG
ACTTCCTACATGTGACTTCATCATGCCTCCACTCAATACTTACCATGTCCCTTACTCTAGTATGGACGTTCTTCG
CCTTGGCTGTGCTAGACATTGCAGTAAACGCTGCCGCCGGTCCAGCTGCAGTGGCGACCGCCGCGCATGTCAATG
GGAGCCCACTGACAGCGAGAGCACTACAACTCGGTGCGCTCGCTGGAGTCACTAAATCAGGGGTGTTAGCATTTA
TCGAATTCGCAGGGTACGCGGGCTTGCCAACGCCCGCGTGGATACTGTTGGCTCTGGTGGCAAGTGGCTTTGGAA
CTTGTGTCCTGGTCACGGCGGAGATTAGCAATTTGGTTCTTGGAGAAAGTGAGTGGAAACCCGTCCACTGAAGCA
CTGTTCAGCTAGAGCTCTGTGCGGCTCACGTTGGCGGTCATTATCATGACCCATCTAGTCATTGTACTAACGATA
TATAGCACCAAGCGCATTGCTTATTGCGGCTGTTGTCGCTGCTATTCCCCTCTCGGGAGAATGTATGGGGATATA
TCAATGTAAGTCTTTTCTCCTCGCTTGCAGCTCCGTTGCTAATCTTTTCCTGTCCTTCAGCGGCTGGGGGGCTAT
ATGGTGGCAAACCTCAGACACAACTTTGTGTTATGGGGTTCAATGCCTTGGGAGGATACGTCTTTGCTCGTATGG
CACATAACGGAGGTTCGTTGCCGTCTCTCCTACATCATGAAAGCTTCGGGGTCGCTCTCTTCGCTGCTCCTGTTG
GATCGGTTGAATGATTTAACTAATACTTAACTTGAACCTGCAGGCTACGATGTCTGCCCTTACAGTGTTGCTGCC
GCAGCTGGGGCTGTTTACGGTGTCATCACCGGCTTCTTCCATGTCATCCTTGGTTGTCTAGCCGGATTCACCCAC
TATGAAAGCACAAATGGGGAATATGAGATACGGAATGTATTTGGGGTTGCGCGAGGGTATAATCCCAATTGGGCA
CGAAATGTCGGGCATGGAGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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