Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8637.t1
Gene name
Locationscaffold_35:150963..153994
Strand-
Gene length (bp)3031
Transcript length (bp)2904
Coding sequence length (bp)2904
Protein length (aa) 968

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08639 SLD3 DNA replication regulator SLD3 9.3E-163 289 812

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 12.66 6.87 18.45
5d_25C Five days - 25 degrees Celsius 9.46 4.80 14.12
7d_25C Seven days - 25 degrees Celsius 10.47 5.44 15.50
10d_25C Ten days - 25 degrees Celsius 9.24 4.67 13.80
7d_15C Seven days - 15 degrees Celsius 6.85 3.17 10.53
7d_30C Seven days - 30 degrees Celsius 8.55 4.24 12.85

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.300794 no
3d_25C 7d_25C 0.546605 no
3d_25C 7d_15C 0.020660 yes
3d_25C 7d_30C 0.146877 no
3d_25C 10d_25C 0.256842 no
5d_25C 7d_25C 0.779615 no
5d_25C 7d_15C 0.287707 no
5d_25C 7d_30C 0.787319 no
5d_25C 10d_25C 0.955968 no
7d_25C 7d_15C 0.132803 no
7d_25C 7d_30C 0.527174 no
7d_25C 10d_25C 0.722687 no
7d_15C 7d_30C 0.515980 no
7d_15C 10d_25C 0.334157 no
7d_30C 10d_25C 0.842083 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8637.t1
MASRIVPNVLDPLSSSALNKLHEPTPPPIKKRKRDDQVLLDDTSRRLATSSIVIRAHSASLSDEPLILEPITALP
RTRLPLSWLDDTPASRSDDQSGGLFTADIPSLEIDLCVKTEPIVLAVRLVPNGGLYIIERVKRGIYSLSKLARWV
HEGNLVVAAKGWHGTDAADIDSVAVDETGAIPDGFDWWQAAQIDEPFSDDEVSERSAGLDIAVVFGPSESDLGDT
EASFVGDGEHRSHSLAPSRSFDAVEGGSFLLPEPQGLGDLPAAMDADGVDSNVVDVQQSPEEWLDGMREHYLQAL
YVSKTSVAYFAKGPLTRCRTAFQARDLEQPHGSTELIESYREAILATKKMDLKYRETLPLAIRDAALALSDDGAK
SKKRKSKKKKMGKNGLYPGEEGFIHKWWKDRILNEYPAQETSREAESKKQISDLRLRETQLQILLILEVMGLEIT
IASSTNKEKDVNGAQDTPKKAKPKKPTDLNMLLELHLDRMCIWHAVTMEETSAADTAKASSFSSNHLSGKKVESD
AVRDFCTEVIIPFYAARLPDKCKLITRKFGVSGSISSAAKKTQSSSKSRRVEPGGEVKRQQPAPKPRRTLQRVLT
DDKAAASYARHPGLTRSNTAPTQHNAKHDIEPLLPTVLSGSVRGGIQKAKRTENREVDLNAVARQHETKLRKVQM
LANQKKELDAAINALRKPNRELVSKDLADDASKRVVSGSGSRKSRNPVRNPFGEGVQVMATPRGNRRKDAGVGLP
RSLAPSRSFAGVENSPFESPTMIPSSSRRAISFSGADSDPFNSHDNPRSSHLDGAIQETPTRPSSKLFQSDSITA
RRPSSSSGKGLFRVPNLPAPRSSTQPIVPGSPNHSRPKDMSAFIENLSTSSRQFSQSLNHARTSAIMETPPKRQA
PQSISTPTAVPFSLSLDAMVAESPRAHSPPAVMGTPVKGAAVVPVTPEKSQSKSIYAQLGWDDEMEF*
Coding >Pro_DTO377G3_2|g8637.t1
ATGGCCTCGCGCATTGTCCCCAACGTCCTAGATCCGCTCAGTTCATCCGCGCTGAACAAACTCCACGAACCGACC
CCTCCACCTATAAAGAAGAGGAAAAGAGACGATCAAGTACTGCTAGATGATACTTCTAGACGGCTTGCTACCTCT
TCCATCGTCATTAGAGCTCACTCGGCGTCTTTATCTGATGAACCCTTGATCCTCGAACCAATTACGGCCCTCCCC
CGCACAAGGCTGCCCCTCTCGTGGCTCGACGATACGCCTGCATCCCGATCCGACGATCAATCCGGCGGCCTTTTC
ACCGCGGACATCCCCTCGTTAGAAATTGACTTGTGCGTAAAGACGGAACCGATCGTCCTCGCAGTGCGCCTAGTG
CCCAATGGTGGCCTGTACATTATTGAGAGGGTGAAGAGAGGAATATACTCGCTCTCCAAGCTCGCCCGATGGGTG
CACGAGGGCAATCTAGTTGTTGCGGCCAAGGGATGGCATGGAACTGATGCTGCGGATATAGATAGCGTTGCTGTC
GATGAGACCGGGGCTATTCCCGATGGGTTTGACTGGTGGCAGGCTGCTCAGATCGATGAGCCCTTCTCCGACGAT
GAGGTGAGTGAAAGGTCTGCTGGGCTGGATATTGCGGTTGTCTTTGGTCCGTCTGAGTCGGACCTCGGGGATACC
GAGGCATCCTTTGTGGGTGATGGAGAGCACCGGAGCCATTCGCTTGCTCCGTCGAGGAGTTTTGATGCCGTTGAA
GGGGGCTCTTTCTTGCTTCCTGAACCTCAGGGCTTGGGGGATTTACCTGCGGCTATGGATGCTGATGGTGTCGAT
TCCAATGTTGTGGATGTGCAACAGTCGCCTGAGGAGTGGCTGGACGGGATGAGAGAGCACTATCTGCAGGCTCTC
TACGTTTCAAAGACTTCTGTGGCGTACTTTGCGAAGGGCCCGTTAACACGCTGTCGGACTGCTTTCCAGGCTCGT
GACTTGGAACAGCCTCATGGCTCGACGGAGTTGATCGAATCCTATCGCGAGGCTATCCTCGCTACGAAGAAAATG
GACCTCAAATACAGAGAAACATTGCCCCTGGCAATTCGCGATGCAGCTCTTGCGCTTTCTGATGATGGCGCAAAA
TCTAAGAAGCGGAAAAGTAAGAAAAAGAAGATGGGGAAGAATGGCCTTTACCCAGGGGAGGAAGGATTCATCCAC
AAGTGGTGGAAGGACAGAATCTTGAATGAATATCCTGCACAGGAAACGTCGCGTGAAGCAGAGTCTAAGAAACAG
ATTTCGGATCTCCGCCTCCGCGAGACACAATTGCAGATCCTGCTGATTTTGGAAGTCATGGGGTTGGAAATCACC
ATTGCTTCCAGCACTAACAAGGAGAAAGATGTAAATGGGGCGCAAGATACGCCGAAGAAAGCCAAGCCTAAGAAG
CCAACGGATTTGAACATGCTTCTTGAACTCCATCTCGATCGGATGTGTATTTGGCACGCTGTGACAATGGAAGAA
ACATCGGCCGCCGATACAGCAAAGGCTTCTTCTTTCAGTAGCAACCATCTTTCAGGCAAGAAAGTCGAGAGCGAT
GCGGTGCGTGACTTCTGCACAGAAGTCATCATTCCATTCTATGCTGCGCGTCTCCCGGACAAATGCAAGCTGATC
ACCCGCAAATTCGGGGTATCCGGCAGTATTTCCTCGGCTGCTAAAAAGACACAATCTTCGAGTAAATCACGCCGT
GTGGAACCCGGGGGGGAAGTCAAGCGACAACAGCCTGCACCGAAGCCCCGACGGACATTACAGCGAGTACTTACG
GACGATAAAGCGGCAGCGTCCTATGCTCGGCACCCAGGACTGACTCGATCCAACACTGCGCCGACCCAGCATAAT
GCGAAGCACGATATTGAACCCTTGCTGCCCACTGTTCTCAGCGGCAGTGTCCGGGGTGGCATTCAGAAAGCAAAA
CGCACCGAAAACCGCGAGGTTGATCTTAACGCCGTAGCACGACAGCATGAGACTAAATTGAGAAAGGTCCAAATG
CTGGCCAACCAGAAGAAAGAGCTGGATGCTGCTATTAACGCACTTCGGAAGCCGAACAGAGAGCTCGTCTCCAAG
GATCTGGCAGACGATGCGTCGAAACGGGTTGTAAGTGGCAGCGGTTCAAGGAAGTCAAGAAATCCCGTGCGCAAT
CCGTTCGGCGAAGGTGTACAGGTCATGGCGACTCCTCGAGGCAATCGAAGGAAGGACGCGGGGGTCGGGCTACCT
CGTAGCCTGGCTCCATCCCGGTCATTTGCTGGTGTGGAAAATTCTCCTTTCGAGTCTCCCACCATGATCCCGTCC
TCGAGTCGACGGGCGATCTCATTCTCTGGCGCTGACTCCGATCCTTTCAATTCTCATGACAATCCACGATCAAGT
CATCTGGACGGAGCTATTCAAGAAACTCCAACTAGGCCATCTTCCAAACTTTTCCAGAGTGATAGCATAACTGCG
CGTCGCCCATCATCCTCCTCCGGCAAGGGCCTTTTCAGGGTACCCAACCTTCCAGCGCCTCGCTCATCTACACAA
CCAATAGTCCCAGGTTCCCCCAACCATTCACGCCCTAAGGACATGTCCGCATTCATAGAAAACTTGTCGACATCA
TCTCGACAATTCAGCCAGTCTCTCAATCATGCTCGCACCTCGGCAATCATGGAGACGCCACCCAAAAGACAGGCA
CCGCAGAGTATATCTACTCCCACCGCTGTGCCGTTTTCTCTATCGCTTGATGCCATGGTCGCCGAGAGTCCTCGC
GCTCACTCCCCACCTGCGGTCATGGGAACCCCCGTCAAAGGTGCTGCAGTTGTGCCAGTAACTCCCGAGAAATCC
CAATCCAAATCGATATACGCGCAGCTGGGCTGGGATGACGAGATGGAATTCTAA
Transcript >Pro_DTO377G3_2|g8637.t1
ATGGCCTCGCGCATTGTCCCCAACGTCCTAGATCCGCTCAGTTCATCCGCGCTGAACAAACTCCACGAACCGACC
CCTCCACCTATAAAGAAGAGGAAAAGAGACGATCAAGTACTGCTAGATGATACTTCTAGACGGCTTGCTACCTCT
TCCATCGTCATTAGAGCTCACTCGGCGTCTTTATCTGATGAACCCTTGATCCTCGAACCAATTACGGCCCTCCCC
CGCACAAGGCTGCCCCTCTCGTGGCTCGACGATACGCCTGCATCCCGATCCGACGATCAATCCGGCGGCCTTTTC
ACCGCGGACATCCCCTCGTTAGAAATTGACTTGTGCGTAAAGACGGAACCGATCGTCCTCGCAGTGCGCCTAGTG
CCCAATGGTGGCCTGTACATTATTGAGAGGGTGAAGAGAGGAATATACTCGCTCTCCAAGCTCGCCCGATGGGTG
CACGAGGGCAATCTAGTTGTTGCGGCCAAGGGATGGCATGGAACTGATGCTGCGGATATAGATAGCGTTGCTGTC
GATGAGACCGGGGCTATTCCCGATGGGTTTGACTGGTGGCAGGCTGCTCAGATCGATGAGCCCTTCTCCGACGAT
GAGGTGAGTGAAAGGTCTGCTGGGCTGGATATTGCGGTTGTCTTTGGTCCGTCTGAGTCGGACCTCGGGGATACC
GAGGCATCCTTTGTGGGTGATGGAGAGCACCGGAGCCATTCGCTTGCTCCGTCGAGGAGTTTTGATGCCGTTGAA
GGGGGCTCTTTCTTGCTTCCTGAACCTCAGGGCTTGGGGGATTTACCTGCGGCTATGGATGCTGATGGTGTCGAT
TCCAATGTTGTGGATGTGCAACAGTCGCCTGAGGAGTGGCTGGACGGGATGAGAGAGCACTATCTGCAGGCTCTC
TACGTTTCAAAGACTTCTGTGGCGTACTTTGCGAAGGGCCCGTTAACACGCTGTCGGACTGCTTTCCAGGCTCGT
GACTTGGAACAGCCTCATGGCTCGACGGAGTTGATCGAATCCTATCGCGAGGCTATCCTCGCTACGAAGAAAATG
GACCTCAAATACAGAGAAACATTGCCCCTGGCAATTCGCGATGCAGCTCTTGCGCTTTCTGATGATGGCGCAAAA
TCTAAGAAGCGGAAAAGTAAGAAAAAGAAGATGGGGAAGAATGGCCTTTACCCAGGGGAGGAAGGATTCATCCAC
AAGTGGTGGAAGGACAGAATCTTGAATGAATATCCTGCACAGGAAACGTCGCGTGAAGCAGAGTCTAAGAAACAG
ATTTCGGATCTCCGCCTCCGCGAGACACAATTGCAGATCCTGCTGATTTTGGAAGTCATGGGGTTGGAAATCACC
ATTGCTTCCAGCACTAACAAGGAGAAAGATGTAAATGGGGCGCAAGATACGCCGAAGAAAGCCAAGCCTAAGAAG
CCAACGGATTTGAACATGCTTCTTGAACTCCATCTCGATCGGATGTGTATTTGGCACGCTGTGACAATGGAAGAA
ACATCGGCCGCCGATACAGCAAAGGCTTCTTCTTTCAGTAGCAACCATCTTTCAGGCAAGAAAGTCGAGAGCGAT
GCGGTGCGTGACTTCTGCACAGAAGTCATCATTCCATTCTATGCTGCGCGTCTCCCGGACAAATGCAAGCTGATC
ACCCGCAAATTCGGGGTATCCGGCAGTATTTCCTCGGCTGCTAAAAAGACACAATCTTCGAGTAAATCACGCCGT
GTGGAACCCGGGGGGGAAGTCAAGCGACAACAGCCTGCACCGAAGCCCCGACGGACATTACAGCGAGTACTTACG
GACGATAAAGCGGCAGCGTCCTATGCTCGGCACCCAGGACTGACTCGATCCAACACTGCGCCGACCCAGCATAAT
GCGAAGCACGATATTGAACCCTTGCTGCCCACTGTTCTCAGCGGCAGTGTCCGGGGTGGCATTCAGAAAGCAAAA
CGCACCGAAAACCGCGAGGTTGATCTTAACGCCGTAGCACGACAGCATGAGACTAAATTGAGAAAGGTCCAAATG
CTGGCCAACCAGAAGAAAGAGCTGGATGCTGCTATTAACGCACTTCGGAAGCCGAACAGAGAGCTCGTCTCCAAG
GATCTGGCAGACGATGCGTCGAAACGGGTTGTAAGTGGCAGCGGTTCAAGGAAGTCAAGAAATCCCGTGCGCAAT
CCGTTCGGCGAAGGTGTACAGGTCATGGCGACTCCTCGAGGCAATCGAAGGAAGGACGCGGGGGTCGGGCTACCT
CGTAGCCTGGCTCCATCCCGGTCATTTGCTGGTGTGGAAAATTCTCCTTTCGAGTCTCCCACCATGATCCCGTCC
TCGAGTCGACGGGCGATCTCATTCTCTGGCGCTGACTCCGATCCTTTCAATTCTCATGACAATCCACGATCAAGT
CATCTGGACGGAGCTATTCAAGAAACTCCAACTAGGCCATCTTCCAAACTTTTCCAGAGTGATAGCATAACTGCG
CGTCGCCCATCATCCTCCTCCGGCAAGGGCCTTTTCAGGGTACCCAACCTTCCAGCGCCTCGCTCATCTACACAA
CCAATAGTCCCAGGTTCCCCCAACCATTCACGCCCTAAGGACATGTCCGCATTCATAGAAAACTTGTCGACATCA
TCTCGACAATTCAGCCAGTCTCTCAATCATGCTCGCACCTCGGCAATCATGGAGACGCCACCCAAAAGACAGGCA
CCGCAGAGTATATCTACTCCCACCGCTGTGCCGTTTTCTCTATCGCTTGATGCCATGGTCGCCGAGAGTCCTCGC
GCTCACTCCCCACCTGCGGTCATGGGAACCCCCGTCAAAGGTGCTGCAGTTGTGCCAGTAACTCCCGAGAAATCC
CAATCCAAATCGATATACGCGCAGCTGGGCTGGGATGACGAGATGGAATTCTAA
Gene >Pro_DTO377G3_2|g8637.t1
ATGGCCTCGCGCATTGTCCCCAACGTCCTAGATCCGCTCAGTTCATCCGCGCTGAACAAACTCCACGAACCGACC
CCTCCACCTATAAAGAAGAGGAAAAGAGACGATCAAGTACTGCTAGATGATACTTCTAGACGGCTTGCTACCTCT
TCCATCGTCATTAGAGTGAGTCATGCTTACAACTGGCTCAGCATACGCTCAATCCATTGGTTGCTATTGCTCACT
CTCCGCAACTTGTATAGGCTCACTCGGCGTCTTTATCTGATGAACCCTTGATCCTCGAACCAATTACGGCCCTCC
CCCGCACAAGGCTGCCCCTCTCGTGGCTCGACGATACGCCTGCATCCCGATCCGACGATCAATCCGGCGGCCTTT
TCACCGCGGACATCCCCTCGTTAGAAATTGACTTGTGCGTAAAGACGGAACCGATCGTCCTCGCAGTGCGCCTAG
TGCCCAATGGTGGCCTGTACATTATTGAGAGGGTGAAGAGAGGAATATACTCGCTCTCCAAGCTCGCCCGATGGG
TGCACGAGGGCAATCTAGTTGTTGCGGCCAAGGGATGGCATGGAACTGATGCTGCGGATATAGATAGCGTTGCTG
TCGATGAGACCGGGGCTATTCCCGATGGGTTTGACTGGTGGCAGGCTGCTCAGATCGATGAGCCCTTCTCCGACG
ATGAGGTGAGTGAAAGGTCTGCTGGGCTGGATATTGCGGTTGTCTTTGGTCCGTCTGAGTCGGACCTCGGGGATA
CCGAGGCATCCTTTGTGGGTGATGGAGAGCACCGGAGCCATTCGCTTGCTCCGTCGAGGAGTTTTGATGCCGTTG
AAGGGGGCTCTTTCTTGCTTCCTGAACCTCAGGGCTTGGGGGATTTACCTGCGGCTATGGATGCTGATGGTGTCG
ATTCCAATGTTGTGGATGTGCAACAGTCGCCTGAGGAGTGGCTGGACGGGATGAGAGAGCACTATCTGCAGGCTC
TCTACGTTTCAAAGGTGATTTGCTCTACTCGATATTAGGAGTTTGCCCGGCTGACATTTTCTAGACTTCTGTGGC
GTACTTTGCGAAGGGCCCGTTAACACGCTGTCGGACTGCTTTCCAGGCTCGTGACTTGGAACAGCCTCATGGCTC
GACGGAGTTGATCGAATCCTATCGCGAGGCTATCCTCGCTACGAAGAAAATGGACCTCAAATACAGAGAAACATT
GCCCCTGGCAATTCGCGATGCAGCTCTTGCGCTTTCTGATGATGGCGCAAAATCTAAGAAGCGGAAAAGTAAGAA
AAAGAAGATGGGGAAGAATGGCCTTTACCCAGGGGAGGAAGGATTCATCCACAAGTGGTGGAAGGACAGAATCTT
GAATGAATATCCTGCACAGGAAACGTCGCGTGAAGCAGAGTCTAAGAAACAGATTTCGGATCTCCGCCTCCGCGA
GACACAATTGCAGATCCTGCTGATTTTGGAAGTCATGGGGTTGGAAATCACCATTGCTTCCAGCACTAACAAGGA
GAAAGATGTAAATGGGGCGCAAGATACGCCGAAGAAAGCCAAGCCTAAGAAGCCAACGGATTTGAACATGCTTCT
TGAACTCCATCTCGATCGGATGTGTATTTGGCACGCTGTGACAATGGAAGAAACATCGGCCGCCGATACAGCAAA
GGCTTCTTCTTTCAGTAGCAACCATCTTTCAGGCAAGAAAGTCGAGAGCGATGCGGTGCGTGACTTCTGCACAGA
AGTCATCATTCCATTCTATGCTGCGCGTCTCCCGGACAAATGCAAGCTGATCACCCGCAAATTCGGGGTATCCGG
CAGTATTTCCTCGGCTGCTAAAAAGACACAATCTTCGAGTAAATCACGCCGTGTGGAACCCGGGGGGGAAGTCAA
GCGACAACAGCCTGCACCGAAGCCCCGACGGACATTACAGCGAGTACTTACGGACGATAAAGCGGCAGCGTCCTA
TGCTCGGCACCCAGGACTGACTCGATCCAACACTGCGCCGACCCAGCATAATGCGAAGCACGATATTGAACCCTT
GCTGCCCACTGTTCTCAGCGGCAGTGTCCGGGGTGGCATTCAGAAAGCAAAACGCACCGAAAACCGCGAGGTTGA
TCTTAACGCCGTAGCACGACAGCATGAGACTAAATTGAGAAAGGTCCAAATGCTGGCCAACCAGAAGAAAGAGCT
GGATGCTGCTATTAACGCACTTCGGAAGCCGAACAGAGAGCTCGTCTCCAAGGATCTGGCAGACGATGCGTCGAA
ACGGGTTGTAAGTGGCAGCGGTTCAAGGAAGTCAAGAAATCCCGTGCGCAATCCGTTCGGCGAAGGTGTACAGGT
CATGGCGACTCCTCGAGGCAATCGAAGGAAGGACGCGGGGGTCGGGCTACCTCGTAGCCTGGCTCCATCCCGGTC
ATTTGCTGGTGTGGAAAATTCTCCTTTCGAGTCTCCCACCATGATCCCGTCCTCGAGTCGACGGGCGATCTCATT
CTCTGGCGCTGACTCCGATCCTTTCAATTCTCATGACAATCCACGATCAAGTCATCTGGACGGAGCTATTCAAGA
AACTCCAACTAGGCCATCTTCCAAACTTTTCCAGAGTGATAGCATAACTGCGCGTCGCCCATCATCCTCCTCCGG
CAAGGGCCTTTTCAGGGTACCCAACCTTCCAGCGCCTCGCTCATCTACACAACCAATAGTCCCAGGTTCCCCCAA
CCATTCACGCCCTAAGGACATGTCCGCATTCATAGAAAACTTGTCGACATCATCTCGACAATTCAGCCAGTCTCT
CAATCATGCTCGCACCTCGGCAATCATGGAGACGCCACCCAAAAGACAGGCACCGCAGAGTATATCTACTCCCAC
CGCTGTGCCGTTTTCTCTATCGCTTGATGCCATGGTCGCCGAGAGTCCTCGCGCTCACTCCCCACCTGCGGTCAT
GGGAACCCCCGTCAAAGGTGCTGCAGTTGTGCCAGTAACTCCCGAGAAATCCCAATCCAAATCGATATACGCGCA
GCTGGGCTGGGATGACGAGATGGAATTCTAA

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