Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Pro_DTO377G3_2|g8622.t1
Gene name
Location	scaffold_35:99659..102750
Strand	-
Gene length (bp)	3091
Transcript length (bp)	1932
Coding sequence length (bp)	1932
Protein length (aa)	644

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14792	DNA_pol_B_palm	DNA polymerase beta palm	1.4E-32	521	627
PF14716	HHH_8	Helix-hairpin-helix domain	5.4E-19	387	450
PF10391	DNA_pol_lambd_f	Fingers domain of DNA polymerase lambda	2.8E-15	471	518
PF00533	BRCT	BRCA1 C Terminus (BRCT) domain	1.3E-04	118	199

GO

GO Term	Description	Terminal node
GO:0034061	DNA polymerase activity	Yes
GO:0003677	DNA binding	Yes
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0097159	organic cyclic compound binding	No
GO:0005488	binding	No
GO:0140097	catalytic activity, acting on DNA	No
GO:0016772	transferase activity, transferring phosphorus-containing groups	No
GO:0016740	transferase activity	No
GO:0016779	nucleotidyltransferase activity	No
GO:1901363	heterocyclic compound binding	No
GO:0003676	nucleic acid binding	No
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 37	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g8622.t1 MKDLFPTKKSFFTALDRLDDSDDQDEEDDSWGNLLTSADKGLDKPNPNKVAPFAERIRANSDPISSCDLQSKRGS PFAVAKPAPTNRPRTAGTMPAIKSAGPPQKKRKTNNAKIIPVDQQIFKGLVFFFFPNNDVSPFRRLRIQRAQDYG ARWSQNWATDVTHVIMDKNLLLTDLLNYLKLESLPTNVALVNESYPSECIQFRSVLDTSHLRFRPNGTPTTAEKQ KSPVVEPPLPDSLPLKPSRREKNQSPERCLSPVKKPTPNSLPKDLPEIVPESVPNNMISEPVHEPAAEEACKRGS RERDALDDIIDEAKATSHLPLDPVEFPVDESAGASDNETSSSGEESSWKTPKTSTGEGKGKGKSDWTKGFACMQK FDPDTKLDVPNSGTIEVLEQMLEYYTQTADQWRVMAYRKAISALRKQPNKIVTRTQARAIPGIGERLADKIEEIV MTNRLRRLENTNNTPEDLIIKEFLGVYGAGLPQASKWVAQGYRSLKDLLERAPLTKQQRIGVERHSDFAQRIPRK EVEAHGAIVRKAVQAVDRDMQVIVSGSYRRGALTCGDVDCLITKPGASLEQIRITMLGLVVPRLFSSGFLQASLA ISSHQDGSKWHGASALPGTTLWRRIDLFPCDCTYQLGGIHCLV*
Coding	>Pro_DTO377G3_2|g8622.t1 ATGAAGGACCTATTTCCAACTAAAAAGAGCTTTTTTACGGCTCTTGATCGGCTGGATGACTCAGATGATCAAGAT GAAGAGGATGATAGCTGGGGGAATCTTCTAACTTCTGCAGACAAAGGACTCGACAAACCCAATCCAAACAAAGTC GCTCCTTTCGCGGAGCGTATTCGAGCAAATTCGGACCCTATATCTTCGTGTGACCTTCAAAGCAAGAGAGGCAGT CCGTTCGCTGTCGCTAAGCCTGCCCCTACGAACCGCCCTCGGACAGCTGGAACTATGCCTGCTATCAAGAGCGCA GGGCCTCCTCAAAAGAAAAGAAAGACCAATAATGCTAAGATAATCCCAGTTGACCAGCAGATCTTCAAGGGATTG GTCTTTTTCTTCTTCCCAAACAACGATGTATCTCCATTCCGACGATTGCGCATTCAACGAGCGCAGGATTATGGT GCACGATGGAGTCAAAATTGGGCTACCGATGTCACTCATGTGATTATGGACAAGAACTTGTTATTGACCGATCTC CTTAACTACCTCAAACTTGAATCCTTGCCAACGAATGTCGCTCTTGTCAATGAATCATATCCATCCGAATGTATC CAGTTTCGTTCCGTTCTTGATACCTCGCACCTTCGATTTCGTCCCAACGGAACTCCAACGACTGCCGAGAAGCAG AAGTCTCCAGTTGTGGAACCACCACTTCCTGATTCTCTTCCATTGAAACCATCGCGGCGGGAGAAAAACCAGTCT CCGGAACGTTGCTTATCGCCAGTCAAGAAACCGACGCCAAACTCCTTGCCAAAAGACTTACCAGAAATTGTACCG GAAAGTGTGCCCAATAATATGATCTCTGAACCGGTCCATGAACCTGCAGCCGAAGAAGCTTGTAAAAGAGGAAGT CGGGAGCGAGATGCACTGGATGATATAATAGACGAGGCTAAGGCCACAAGTCATTTGCCTCTGGATCCAGTCGAA TTTCCCGTTGACGAATCTGCTGGTGCTTCCGATAACGAAACCTCGAGCTCAGGGGAGGAGTCAAGTTGGAAAACA CCAAAAACATCCACCGGAGAAGGCAAGGGCAAAGGAAAATCCGACTGGACAAAAGGTTTCGCCTGTATGCAGAAG TTCGATCCGGACACGAAGCTTGACGTCCCAAACAGCGGAACCATTGAGGTACTTGAGCAAATGCTGGAATACTAC ACCCAGACTGCAGACCAGTGGCGGGTTATGGCCTATCGCAAAGCCATCAGCGCTTTGCGAAAGCAACCAAACAAG ATTGTTACGCGAACACAGGCTCGGGCCATCCCTGGTATCGGAGAGCGGTTGGCTGACAAAATCGAAGAAATTGTC ATGACTAACCGCCTTCGTCGTCTCGAGAACACCAATAATACCCCAGAAGACCTGATAATCAAAGAATTTCTCGGC GTCTATGGTGCTGGCCTTCCCCAGGCCTCCAAATGGGTCGCACAGGGCTACAGGTCTCTGAAGGATTTATTGGAA AGAGCTCCATTGACTAAACAGCAGCGTATTGGGGTGGAACGCCACAGCGACTTCGCGCAACGAATCCCCCGCAAG GAGGTTGAAGCCCACGGGGCGATCGTGCGAAAGGCGGTGCAGGCTGTGGATAGGGATATGCAGGTGATCGTCTCG GGCTCTTACCGCCGCGGGGCACTCACCTGCGGGGACGTGGACTGTCTGATCACCAAACCTGGTGCCTCGCTTGAG CAAATCCGCATTACGATGCTCGGTCTTGTTGTACCTAGATTGTTCAGTAGTGGCTTTCTGCAGGCTAGCCTTGCC ATCTCGTCGCATCAGGATGGATCTAAATGGCACGGTGCATCAGCCCTACCTGGCACCACCCTGTGGCGTCGGATC GATTTATTTCCTTGTGACTGTACCTATCAGCTTGGCGGGATACACTGCCTAGTCTGA
Transcript	>Pro_DTO377G3_2|g8622.t1 ATGAAGGACCTATTTCCAACTAAAAAGAGCTTTTTTACGGCTCTTGATCGGCTGGATGACTCAGATGATCAAGAT GAAGAGGATGATAGCTGGGGGAATCTTCTAACTTCTGCAGACAAAGGACTCGACAAACCCAATCCAAACAAAGTC GCTCCTTTCGCGGAGCGTATTCGAGCAAATTCGGACCCTATATCTTCGTGTGACCTTCAAAGCAAGAGAGGCAGT CCGTTCGCTGTCGCTAAGCCTGCCCCTACGAACCGCCCTCGGACAGCTGGAACTATGCCTGCTATCAAGAGCGCA GGGCCTCCTCAAAAGAAAAGAAAGACCAATAATGCTAAGATAATCCCAGTTGACCAGCAGATCTTCAAGGGATTG GTCTTTTTCTTCTTCCCAAACAACGATGTATCTCCATTCCGACGATTGCGCATTCAACGAGCGCAGGATTATGGT GCACGATGGAGTCAAAATTGGGCTACCGATGTCACTCATGTGATTATGGACAAGAACTTGTTATTGACCGATCTC CTTAACTACCTCAAACTTGAATCCTTGCCAACGAATGTCGCTCTTGTCAATGAATCATATCCATCCGAATGTATC CAGTTTCGTTCCGTTCTTGATACCTCGCACCTTCGATTTCGTCCCAACGGAACTCCAACGACTGCCGAGAAGCAG AAGTCTCCAGTTGTGGAACCACCACTTCCTGATTCTCTTCCATTGAAACCATCGCGGCGGGAGAAAAACCAGTCT CCGGAACGTTGCTTATCGCCAGTCAAGAAACCGACGCCAAACTCCTTGCCAAAAGACTTACCAGAAATTGTACCG GAAAGTGTGCCCAATAATATGATCTCTGAACCGGTCCATGAACCTGCAGCCGAAGAAGCTTGTAAAAGAGGAAGT CGGGAGCGAGATGCACTGGATGATATAATAGACGAGGCTAAGGCCACAAGTCATTTGCCTCTGGATCCAGTCGAA TTTCCCGTTGACGAATCTGCTGGTGCTTCCGATAACGAAACCTCGAGCTCAGGGGAGGAGTCAAGTTGGAAAACA CCAAAAACATCCACCGGAGAAGGCAAGGGCAAAGGAAAATCCGACTGGACAAAAGGTTTCGCCTGTATGCAGAAG TTCGATCCGGACACGAAGCTTGACGTCCCAAACAGCGGAACCATTGAGGTACTTGAGCAAATGCTGGAATACTAC ACCCAGACTGCAGACCAGTGGCGGGTTATGGCCTATCGCAAAGCCATCAGCGCTTTGCGAAAGCAACCAAACAAG ATTGTTACGCGAACACAGGCTCGGGCCATCCCTGGTATCGGAGAGCGGTTGGCTGACAAAATCGAAGAAATTGTC ATGACTAACCGCCTTCGTCGTCTCGAGAACACCAATAATACCCCAGAAGACCTGATAATCAAAGAATTTCTCGGC GTCTATGGTGCTGGCCTTCCCCAGGCCTCCAAATGGGTCGCACAGGGCTACAGGTCTCTGAAGGATTTATTGGAA AGAGCTCCATTGACTAAACAGCAGCGTATTGGGGTGGAACGCCACAGCGACTTCGCGCAACGAATCCCCCGCAAG GAGGTTGAAGCCCACGGGGCGATCGTGCGAAAGGCGGTGCAGGCTGTGGATAGGGATATGCAGGTGATCGTCTCG GGCTCTTACCGCCGCGGGGCACTCACCTGCGGGGACGTGGACTGTCTGATCACCAAACCTGGTGCCTCGCTTGAG CAAATCCGCATTACGATGCTCGGTCTTGTTGTACCTAGATTGTTCAGTAGTGGCTTTCTGCAGGCTAGCCTTGCC ATCTCGTCGCATCAGGATGGATCTAAATGGCACGGTGCATCAGCCCTACCTGGCACCACCCTGTGGCGTCGGATC GATTTATTTCCTTGTGACTGTACCTATCAGCTTGGCGGGATACACTGCCTAGTCTGA
Gene	>Pro_DTO377G3_2|g8622.t1 ATGAAGGACCTATTTCCAACTAAAAAGAGCTTTTTTACGGCTCTTGATCGGCTGGATGACTCAGATGATCAAGAT GAAGAGGATGATAGCTGGGGGAATCTTCTAACTTCTGCAGACAAAGGACTCGACAAACCCAATCCAAACAAAGTC GCTCCTTTCGCGGAGCGTATTCGAGCAAATTCGGACCCTATATCTTCGTGTGACCTTCAAAGCAAGAGAGGCAGT CCGTTCGCTGTCGCTAAGCCTGCCCCTACGAACCGCCCTCGGACAGCTGGAACTATGCCTGCTATCAAGAGCGCA GGGCCTCCTCAAAAGAAAAGAAAGACCAATAATGCTAAGATAATCCCAGTTGACCAGCAGATCTTCAAGGGATTG GTCTTTTGTAAGTAGTCTAGATATCCCACAGCCTACTCTCACTGAACTCTCAATACCAGTCTTCTTCCCAAACAA CGATGTATCTCCATTCCGACGATTGCGCATTCAACGAGCGCAGGATTATGGTGCACGATGGAGTCAAAATTGGGC TACCGATGTCACTCATGTGATTATGGACAAGAACTTGTTATTGACCGATCTCCTTAACTACCTCAAACTTGAATC CTTGCCAGTAGGTTCATTCACGAGATACCCAGACTTTAATATTAACCGCTGTAGACGAATGTCGCTCTTGTCAAT GAATCATATCCATCCGAATGTATCCAGTTTCGTTCCGTTCTTGATACCTCGCACCTTCGATTTCGTCCCAACGGA ACTCCAACGACTGCCGAGAAGCAGAAGTCTCCAGTTGTGGAACCACCACTTCCTGATTCTCTTCCATTGAAACCA TCGCGGCGGGAGAAAAACCAGTCTCCGGAACGTTGCTTATCGCCAGTCAAGAAACCGACGCCAAACTCCTTGCCA AAAGACTTACCAGAAATTGTACCGGAAAGTGTGCCCAATAATATGATCTCTGAACCGGTCCATGAACCTGCAGCC GAAGAAGCTTGTAAAAGAGGAAGTCGGGAGCGAGATGCACTGGATGATATAATAGACGAGGCTAAGGCCACAAGT CATTTGGTAAAACTACTTCCCCGTCGGCGAAAGTTCACAGAACTGATCTTTACAACCAGCCTCTGGATCCAGTCG AATTTCCCGTTGACGAATCTGCTGGTGCTTCCGATAACGAAACCTCGAGCTCAGGGGAGGAGTCAAGTTGGAAAA CACCAAAAACATCCACCGGAGAAGGCAAGGGCAAAGGAAAATCCGACTGGACAAAAGGTTTCGCCTGTATGCAGA AGTTCGATCCGGACACGAAGCTTGACGTCCCAAACAGCGGAACCATTGAGGTACTTGAGCAAATGCTGGAATACT ACACCCAGACTGCAGACCAGTGGCGGGTTATGGCCTATCGCAAAGCCATCAGCGCTTTGCGAAAGCAACCAAACA AGATTGTTACGCGAACACAGGCTCGGGCCATCCCTGGTATCGGAGAGCGGTTGGCTGACAAAATCGAAGAAATTG TCATGACTAACCGCCTTCGTCGTCTCGAGAACACCAATAATACCCCAGAAGACCTGATAATCAAAGAATTTCTCG GCGTCTATGGTGCTGGCCTTCCCCAGGCCTCCAAATGGGTCGCACAGGGCTACAGGTCTCTGAAGGATTTATTGG AAAGAGCTCCATTGACTAAACAGCAGCGTATTGGGGTGGAACGCCACAGCGACTTCGCGCAACGAATCCCCCGCA AGGAGGTTGAAGCCCACGGGGCGATCGTGCGAAAGGCGGTGCAGGCTGTGGATAGGGATATGCAGGTGATCGTCT CGGGCTCTTACCGCCGCGGGGCACTCACCTGCGGGGACGTGGACTGTCTGATCACCAAACCTGGTGCCTCGCTTG AGCAAATCCGCATTACGATGCTCGGTCTTGTTGTACCTAGATTGTTCAGTAGTGGCTTTCTGCAGGCTAGCCTTG CCATCTCGTCGCATCAGGATGGATCTAAATGGCACGGTGCATCAGCCCTACCTGGCACCACCCTGTGGCGTCGGA TCGATTTATTGTTCGTTCCTGATGCGGAGATCGGAGCGGCGTTGATATACTTTACGGGGAATGATATATTCAACC GCAGTATGAGACTGCTGGCACGCAAGAAAGGCATGTGCTTGAACCAAAAGGGCCTTTATACCGATGTGCTTCGGA ACCAGCAAGTGAAACTGAATGGGGGTCGGCTGCTTGAGGGCCGGAACGAACGTCGGATCTTTGCTCTGTTGGGTG TGCCCTGGCGGCCTCCCGAGCACCGTATTTGTTGATGAGCATGAAGGTTCCATCCATAGGTTCATGAGAGTATCA GTTCTGAGTGTTGTTAGTATTGGCCATACACAAAAGGGGGAAATTGAGGTTTGGGGCCCCGGGGGGAAGCACCGA AATATAGGCACGGGAATGACGATATTCTTAGATTGGCTGTTTTCCAACATGTAGGCGTAGTATGTATGCCAGTCA TTTGTATTGCTAGGTATCAAGTAGACACATATTATCAACCCCTTAAAAAAAGAAAAAAAGAAAAAGAAATGATAC AGCTTGCATAACTCCCCATATATAGAGTTTCCATACAGAAGGAGAGAGAGAGATTCAGAGAGAGGGAGTGGCAGT CACAGTGGCACAAAGTGACTAATAAATCCTCTCCCTCCATTTCTCACCTCTTCTCTTCTTCAACCCCATCCCGTA ACAACTCATCCTTTCCCTCGTCTCCTATCCAAGTTGATATCGAGATATCCTTATTCTTCTTTCATCACCGCCTTT CTCCTACCGCCTTGAAGACATCACCGCCTTTCGTGCGGTGAAGCTTCCATCGCGTGTTCCTCCCCTTGCGATTCC CAGACCGCCCTCTACTGCCCTGGTTTTGCCCGCACATCATCGACTCGATCATCTCGAGATTCGTTTTTCTAAATT CCATTTCGAGTCTCTTCTGAGGCTACTGGTCCTATCTGAGGTTCACAGCCTGGGCCTTGCAGTCCTTGTGACTGT GTGTGTGATTTTCCTCCCACATCCCACATTCCCCATTTCTAATCCGAGTCCACAGACCTATCAGCTTGGCGGGAT ACACTGCCTAGTCTGA