Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8571.t1
Gene name
Locationscaffold_34:195071..196021
Strand-
Gene length (bp)950
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00403 HMA Heavy-metal-associated domain 5.0E-13 8 65
PF00080 Sod_Cu Copper/zinc superoxide dismutase (SODC) 1.1E-07 94 202

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0006801 superoxide metabolic process Yes
GO:0008150 biological_process No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0072593 reactive oxygen species metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8571.t1
MIEPFQTTFSVPMTCEGCVNSISSSLNSLEGINKVEANLKDQLVFIEGTAPPSSIVSAIESTGRDAILRGSGTTN
SSAVCILETHSTTVSNNIRGLARMVQVSPNMTLIDLTINGLAPGKYWTTIREAGDISRGAESTGGIWESLKTKML
GADATVAPAKECRGILGTVDVDNKGRGSVFLDRPVAIWELIGRSMVVSKGTQGPFKREDENTLVGVIARSAGVWD
NDKMVCSCSGKNVWQERKEQVGLGMA*
Coding >Pro_DTO377G3_2|g8571.t1
ATGATTGAACCATTCCAGACGACCTTCTCGGTCCCAATGACATGTGAAGGCTGCGTGAATTCTATATCCAGCTCT
CTAAATAGCCTGGAAGGAATCAATAAAGTTGAAGCAAACCTTAAAGACCAGCTAGTCTTCATCGAAGGCACCGCC
CCTCCCAGCTCCATCGTAAGCGCGATTGAGAGCACCGGCCGCGATGCCATCCTCCGTGGTAGCGGTACTACCAAC
AGTTCCGCCGTATGTATCCTCGAAACACACTCAACGACCGTCTCCAACAACATCCGCGGACTCGCGCGCATGGTC
CAGGTCTCCCCGAACATGACCCTCATCGACCTGACAATCAACGGCCTCGCGCCGGGCAAATACTGGACAACTATC
CGTGAAGCGGGAGATATCTCCCGCGGTGCCGAGTCTACGGGTGGTATCTGGGAGTCTCTGAAGACCAAAATGCTT
GGCGCTGATGCTACTGTCGCCCCGGCCAAGGAGTGCCGGGGCATTCTCGGTACCGTGGATGTTGACAATAAGGGC
CGGGGTAGTGTGTTCTTGGACCGGCCTGTGGCAATCTGGGAGCTTATTGGCCGGAGTATGGTGGTTTCCAAGGGG
ACGCAGGGTCCTTTCAAGCGCGAGGATGAGAATACCCTTGTTGGTGTTATTGCGCGCAGTGCAGGTGTGTGGGAT
AATGATAAGATGGTTTGCTCGTGCTCGGGTAAGAATGTGTGGCAGGAGAGAAAGGAACAGGTTGGTTTGGGTATG
GCTTGA
Transcript >Pro_DTO377G3_2|g8571.t1
ATGATTGAACCATTCCAGACGACCTTCTCGGTCCCAATGACATGTGAAGGCTGCGTGAATTCTATATCCAGCTCT
CTAAATAGCCTGGAAGGAATCAATAAAGTTGAAGCAAACCTTAAAGACCAGCTAGTCTTCATCGAAGGCACCGCC
CCTCCCAGCTCCATCGTAAGCGCGATTGAGAGCACCGGCCGCGATGCCATCCTCCGTGGTAGCGGTACTACCAAC
AGTTCCGCCGTATGTATCCTCGAAACACACTCAACGACCGTCTCCAACAACATCCGCGGACTCGCGCGCATGGTC
CAGGTCTCCCCGAACATGACCCTCATCGACCTGACAATCAACGGCCTCGCGCCGGGCAAATACTGGACAACTATC
CGTGAAGCGGGAGATATCTCCCGCGGTGCCGAGTCTACGGGTGGTATCTGGGAGTCTCTGAAGACCAAAATGCTT
GGCGCTGATGCTACTGTCGCCCCGGCCAAGGAGTGCCGGGGCATTCTCGGTACCGTGGATGTTGACAATAAGGGC
CGGGGTAGTGTGTTCTTGGACCGGCCTGTGGCAATCTGGGAGCTTATTGGCCGGAGTATGGTGGTTTCCAAGGGG
ACGCAGGGTCCTTTCAAGCGCGAGGATGAGAATACCCTTGTTGGTGTTATTGCGCGCAGTGCAGGTGTGTGGGAT
AATGATAAGATGGTTTGCTCGTGCTCGGGTAAGAATGTGTGGCAGGAGAGAAAGGAACAGGTTGGTTTGGGTATG
GCTTGA
Gene >Pro_DTO377G3_2|g8571.t1
ATGATTGAACCATTCCAGGTCAGCCTTGTCTGAGCGACATGACTCACAAACAGCCAGTACTAATGCGGTTCCTAT
GTCTAGACGACCTTCTCGGTCCCAATGACATGTGAAGGCTGCGTGAATTCTATATCCAGCTCTCTAAATAGCCTG
GAAGGTAGTCATCTCACGCGAGCATCTAAACCTTCACGCAAACTGACCCCGCGGCAGGAATCAATAAAGTTGAAG
CAAACCTTAAAGACCAGCTAGTCTTCATCGAAGGCACCGCCCCTCCCAGCTCCATCGTAAGCGCGATTGAGAGCA
CCGGCCGCGATGCCATCCTCCGTGGTAGCGGTACTACCAACAGTATGGAATCCCCGGTGTCTACTTACTATCCCA
TGCGACATAAATGAGCAACCTCAATTGATACAAATTACCAAACAGGTTCCGCCGTATGTATCCTCGAAACACACT
CAACGACCGTCTCCAACAACATCCGCGGACTCGCGCGCATGGTCCAGGTCTCCCCGAACATGACCCTCATCGACC
TGACAATCAACGGCCTCGCGCCGGGCAAATACTGGACAACTATCCGTGAAGCGGGAGATATCTCCCGCGGTGCCG
AGTCTACGGGTGGTATCTGGGAGTCTCTGAAGACCAAAATGCTTGGCGCTGATGCTACTGTCGCCCCGGCCAAGG
AGTGCCGGGGCATTCTCGGTACCGTGGATGTTGACAATAAGGGCCGGGGTAGTGTGTTCTTGGACCGGCCTGTGG
CAATCTGGGAGCTTATTGGCCGGAGTATGGTGGTTTCCAAGGGGACGCAGGGTCCTTTCAAGCGCGAGGATGAGA
ATACCCTTGTTGGTGTTATTGCGCGCAGTGCAGGTGTGTGGGATAATGATAAGATGGTTTGCTCGTGCTCGGGTA
AGAATGTGTGGCAGGAGAGAAAGGAACAGGTTGGTTTGGGTATGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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