Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g8567.t1
Gene name
Location	scaffold_34:182434..183528
Strand	-
Gene length (bp)	1094
Transcript length (bp)	864
Coding sequence length (bp)	864
Protein length (aa)	288

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12353	eIF3g	Eukaryotic translation initiation factor 3 subunit G	1.7E-44	25	152
PF00076	RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.8E-14	209	272

GO

GO Term	Description	Terminal node
GO:0003723	RNA binding	Yes
GO:0097159	organic cyclic compound binding	No
GO:0005488	binding	No
GO:1901363	heterocyclic compound binding	No
GO:0003676	nucleic acid binding	No
GO:0003674	molecular_function	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Orthologs

Orthofinder run ID	2
Orthogroup	8552
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g9306.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g5628.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g5968.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g9063.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g9263.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g4673.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g3337.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g3758.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g181.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g9491.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g5650.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g4444.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g1745.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g5485.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g7152.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g5579.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g8155.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g1631.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g7387.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g8069.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g6547.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g9196.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g7501.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g3510.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g8147.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g5705.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g9485.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g6793.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g4308.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g7305.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g9136.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g1067.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g7016.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g8567.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g8567.t1 MSPAGNRADWADDEDFDDPSVLPPQEVIANKDGTKTVISYRYNDDNKKVKVTRRIKTTIVREHVNPQVAERRKWD KFGLEKGHAAGPSFDTTSVGENIVFRPSVNWKANAKEAEKEGPEKGSMKDQLKDKKVKCRICSGEHFTARCPFKD TMAPVEEGTSAAGGAEAEDDAGGLGAGKSSYVPPHMRKGGAGGGEKMGGRFEKDDLATLRVTNVSELAEENELRD LFERFGRVTRVFLARDRETQRAKGFAFISYADRGDAALACEKVDGFGYRHLILRVEFAKRTT*
Coding	>Pro_DTO377G3_2|g8567.t1 ATGTCTCCAGCTGGGAACCGCGCCGACTGGGCCGACGACGAAGATTTCGATGACCCCTCCGTGCTCCCGCCGCAA GAAGTGATCGCGAACAAGGACGGCACCAAGACCGTCATTTCCTACCGCTACAATGACGACAACAAGAAAGTGAAG GTCACCCGCCGAATTAAGACCACTATTGTCCGCGAACACGTCAACCCTCAGGTCGCCGAACGCCGCAAATGGGAC AAGTTCGGTCTCGAGAAGGGCCACGCCGCCGGTCCCTCATTCGACACCACCTCCGTCGGCGAGAACATCGTCTTC CGACCCAGCGTCAACTGGAAGGCTAATGCTAAGGAGGCTGAGAAGGAGGGTCCCGAGAAGGGCAGCATGAAGGAC CAGTTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGAGAGCATTTCACGGCTCGCTGTCCCTTCAAGGAC ACCATGGCCCCCGTCGAGGAGGGCACTTCTGCTGCTGGTGGCGCCGAGGCGGAGGACGATGCGGGTGGTCTTGGT GCTGGAAAGTCCAGCTACGTTCCTCCTCACATGCGGAAGGGCGGTGCTGGTGGCGGCGAGAAGATGGGTGGTCGC TTCGAGAAGGACGATTTGGCGACACTGAGAGTTACAAACGTCAGCGAGTTGGCAGAGGAGAACGAGTTGCGGGAT CTCTTCGAGCGTTTCGGTCGTGTCACCAGAGTTTTCCTTGCACGGGATCGGGAAACCCAGAGAGCCAAGGGCTTT GCTTTCATCAGCTATGCGGATCGTGGCGACGCAGCACTTGCTTGCGAGAAGGTGGATGGCTTCGGTTACCGCCAC CTTATTCTCCGCGTCGAGTTCGCCAAGCGCACTACTTAA
Transcript	>Pro_DTO377G3_2|g8567.t1 ATGTCTCCAGCTGGGAACCGCGCCGACTGGGCCGACGACGAAGATTTCGATGACCCCTCCGTGCTCCCGCCGCAA GAAGTGATCGCGAACAAGGACGGCACCAAGACCGTCATTTCCTACCGCTACAATGACGACAACAAGAAAGTGAAG GTCACCCGCCGAATTAAGACCACTATTGTCCGCGAACACGTCAACCCTCAGGTCGCCGAACGCCGCAAATGGGAC AAGTTCGGTCTCGAGAAGGGCCACGCCGCCGGTCCCTCATTCGACACCACCTCCGTCGGCGAGAACATCGTCTTC CGACCCAGCGTCAACTGGAAGGCTAATGCTAAGGAGGCTGAGAAGGAGGGTCCCGAGAAGGGCAGCATGAAGGAC CAGTTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGAGAGCATTTCACGGCTCGCTGTCCCTTCAAGGAC ACCATGGCCCCCGTCGAGGAGGGCACTTCTGCTGCTGGTGGCGCCGAGGCGGAGGACGATGCGGGTGGTCTTGGT GCTGGAAAGTCCAGCTACGTTCCTCCTCACATGCGGAAGGGCGGTGCTGGTGGCGGCGAGAAGATGGGTGGTCGC TTCGAGAAGGACGATTTGGCGACACTGAGAGTTACAAACGTCAGCGAGTTGGCAGAGGAGAACGAGTTGCGGGAT CTCTTCGAGCGTTTCGGTCGTGTCACCAGAGTTTTCCTTGCACGGGATCGGGAAACCCAGAGAGCCAAGGGCTTT GCTTTCATCAGCTATGCGGATCGTGGCGACGCAGCACTTGCTTGCGAGAAGGTGGATGGCTTCGGTTACCGCCAC CTTATTCTCCGCGTCGAGTTCGCCAAGCGCACTACTTAA
Gene	>Pro_DTO377G3_2|g8567.t1 ATGTCTCCAGCTGGGAAGTGAGTATACACAGTTGCATCCTACAAAAAACACCGGCCTAACAAATCTTTCTATTTT ACAGCCGCGCCGACTGGGCCGACGACGAAGATTTCGATGACCCCTCCGTGCTCCCGCCGCAAGAAGTGATCGCGA ACAAGGACGGCACCAAGACCGTCATTTCCTACCGCTACAATGACGACAACAAGAAAGTGAAGGTCACCCGCCGAA TTAAGACCACTATTGTCCGCGAACACGTCAACCCTCAGGTCGCCGAACGCCGCAAATGGGACAAGTTCGGTCTCG AGAAGGGCCACGCCGCCGGTCCCTCATTCGACACCACCTCCGTCGGCGAGAACATCGTCTTCCGACCCAGCGTCA ACTGGAAGGCTAATGCTAAGGAGGCTGAGAAGGAGGGTCCCGAGAAGGGCAGCATGAAGGACCAGTTGAAGGACA AGAAGGTCAAGTGTCGTATTTGCAGTGGAGAGCATTTCACGGCTCGCTGTCCCTTCAAGGACACCATGGCCCCCG TCGAGGAGGGCACTTCTGCTGCTGGTGGCGCCGAGGCGGAGGACGATGCGGGTGGTCTTGGTGCTGGAAAGTCCA GCTACGTTCCTCCTCACATGCGGAAGGGCGGTGCTGGTGGCGGCGAGAAGATGGGTGGTCGCTTCGAGAAGGACG ATTTGGCGACACTGAGAGTTACAAACGTATGTTCTGCCATTGTTCTGCTATCTACGAGCTCTATGAGCTCTACGA GCATCGTGATTGTTTATCTTGGTTCGATACTGACTTTTTCAAATAGGTCAGCGAGTTGGCAGAGGAGAACGAGTT GCGGGATCTCTTCGAGCGTTTCGGTCGTGTCACCAGAGTTTTCCTTGCACGGGATCGGGAAACCCAGAGAGCCAA GGGCTTTGCTTTCATCAGCTATGCGGATCGTGGCGACGCAGCACTTGCTTGCGAGAAGGTGGATGGCTGTATGTC TTCAACGCTCCGATTCGTGATCTTCTTTTTACAAGTTCCTCGAGTGCTAACCCGTTCTTCTGCTAGTCGGTTACC GCCACCTTATTCTCCGCGTCGAGTTCGCCAAGCGCACTACTTAA