Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8539.t1
Gene name
Locationscaffold_34:106535..107525
Strand+
Gene length (bp)990
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 2.6E-21 7 220
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.7E-04 3 182

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8539.t1
MHVLLLGGHGKVALHLTPLLLNRGWSVTSVIRNPAHESEILELGQGHKGNLKVLLSSLEDVKSSSDAQKIINTVV
PDYVVWSAGAGGKGGAARTIAIDQEAAKHFITASFASPSVSKLLLVSYLGSRRKQPSWMPDDQWAGIVKVQTEVL
PTYAKAKLEADEYMTALAAQRKREPGPARPFQAINLRPGILTDQPATRKVELGITPKGDGSVTREDVAIVADLLL
ARADTEGWIDLVNGDEGVEEAVERVAREKVDAVVGEDVEGMVKRFFP*
Coding >Pro_DTO377G3_2|g8539.t1
ATGCATGTTCTTCTACTCGGCGGTCATGGCAAAGTAGCCCTTCACCTTACTCCACTCCTCCTCAACCGGGGCTGG
AGCGTAACCAGCGTCATCCGCAACCCTGCGCACGAAAGCGAGATTCTAGAGCTGGGCCAAGGCCACAAGGGCAAC
CTCAAGGTGTTACTATCGAGTCTAGAGGATGTCAAGAGTTCCTCCGACGCTCAAAAAATCATCAACACCGTTGTA
CCGGACTATGTCGTCTGGTCGGCTGGCGCCGGCGGAAAAGGCGGTGCAGCACGCACAATCGCGATCGACCAAGAA
GCAGCGAAGCACTTCATAACAGCATCATTTGCATCACCAAGTGTAAGCAAACTCCTCCTGGTGTCGTACCTAGGC
AGTCGACGCAAGCAGCCGAGCTGGATGCCGGACGATCAATGGGCGGGTATAGTGAAGGTCCAGACGGAAGTGCTG
CCGACGTACGCGAAAGCCAAGCTAGAAGCCGACGAGTACATGACAGCGCTGGCTGCACAGCGGAAGCGCGAGCCT
GGACCGGCGCGGCCTTTCCAGGCTATCAATCTGCGGCCTGGGATTCTGACTGATCAGCCTGCGACGCGGAAAGTC
GAGCTGGGGATCACGCCTAAGGGTGACGGAAGTGTTACTCGGGAGGACGTGGCGATTGTGGCGGATCTTTTGCTT
GCTAGGGCTGATACGGAGGGATGGATTGATCTTGTTAATGGGGATGAGGGGGTTGAAGAGGCTGTTGAGAGGGTT
GCAAGGGAGAAGGTTGATGCTGTTGTTGGGGAGGATGTTGAGGGTATGGTCAAGAGGTTTTTTCCTTAA
Transcript >Pro_DTO377G3_2|g8539.t1
ATGCATGTTCTTCTACTCGGCGGTCATGGCAAAGTAGCCCTTCACCTTACTCCACTCCTCCTCAACCGGGGCTGG
AGCGTAACCAGCGTCATCCGCAACCCTGCGCACGAAAGCGAGATTCTAGAGCTGGGCCAAGGCCACAAGGGCAAC
CTCAAGGTGTTACTATCGAGTCTAGAGGATGTCAAGAGTTCCTCCGACGCTCAAAAAATCATCAACACCGTTGTA
CCGGACTATGTCGTCTGGTCGGCTGGCGCCGGCGGAAAAGGCGGTGCAGCACGCACAATCGCGATCGACCAAGAA
GCAGCGAAGCACTTCATAACAGCATCATTTGCATCACCAAGTGTAAGCAAACTCCTCCTGGTGTCGTACCTAGGC
AGTCGACGCAAGCAGCCGAGCTGGATGCCGGACGATCAATGGGCGGGTATAGTGAAGGTCCAGACGGAAGTGCTG
CCGACGTACGCGAAAGCCAAGCTAGAAGCCGACGAGTACATGACAGCGCTGGCTGCACAGCGGAAGCGCGAGCCT
GGACCGGCGCGGCCTTTCCAGGCTATCAATCTGCGGCCTGGGATTCTGACTGATCAGCCTGCGACGCGGAAAGTC
GAGCTGGGGATCACGCCTAAGGGTGACGGAAGTGTTACTCGGGAGGACGTGGCGATTGTGGCGGATCTTTTGCTT
GCTAGGGCTGATACGGAGGGATGGATTGATCTTGTTAATGGGGATGAGGGGGTTGAAGAGGCTGTTGAGAGGGTT
GCAAGGGAGAAGGTTGATGCTGTTGTTGGGGAGGATGTTGAGGGTATGGTCAAGAGGTTTTTTCCTTAA
Gene >Pro_DTO377G3_2|g8539.t1
ATGCATGTTCTTCTACTCGGCGGTCATGGCAAAGTAGCCCTTCACCTTACTCCACTCCTCCTCAACCGGGGCTGG
AGCGTAACCAGCGTCATCCGCAACCCTGCGCACGAAAGCGAGATTCTAGAGCTGGGCCAAGGCCACAAGGGCAAC
CTCAAGGTGTTACTATCGAGTCTAGAGGATGTCAAGAGTTCCTCCGACGCTCAAAAAATCATCAACACCGTTGTA
CCGGACTATGTCGTCTGGTCGGCTGGTATGGCAACCCTCACCCCTCACCCCGCACTTATCTCTAAACATCGCAAC
GCAACGCACATTGCAATGAGCCATCCCCAAATCAAATAAGAACTCGAAACCATATAGACCTCTATAATGCACTAT
GGAAAATCAACAATTCCCCAAACCACAAACTAACACGCAAACCCAGGCGCCGGCGGAAAAGGCGGTGCAGCACGC
ACAATCGCGATCGACCAAGAAGCAGCGAAGCACTTCATAACAGCATCATTTGCATCACCAAGTGTAAGCAAACTC
CTCCTGGTGTCGTACCTAGGCAGTCGACGCAAGCAGCCGAGCTGGATGCCGGACGATCAATGGGCGGGTATAGTG
AAGGTCCAGACGGAAGTGCTGCCGACGTACGCGAAAGCCAAGCTAGAAGCCGACGAGTACATGACAGCGCTGGCT
GCACAGCGGAAGCGCGAGCCTGGACCGGCGCGGCCTTTCCAGGCTATCAATCTGCGGCCTGGGATTCTGACTGAT
CAGCCTGCGACGCGGAAAGTCGAGCTGGGGATCACGCCTAAGGGTGACGGAAGTGTTACTCGGGAGGACGTGGCG
ATTGTGGCGGATCTTTTGCTTGCTAGGGCTGATACGGAGGGATGGATTGATCTTGTTAATGGGGATGAGGGGGTT
GAAGAGGCTGTTGAGAGGGTTGCAAGGGAGAAGGTTGATGCTGTTGTTGGGGAGGATGTTGAGGGTATGGTCAAG
AGGTTTTTTCCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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