Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g8524.t1
Gene name
Location	scaffold_34:57518..58481
Strand	-
Gene length (bp)	963
Transcript length (bp)	963
Coding sequence length (bp)	963
Protein length (aa)	321

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04181	RPAP2_Rtr1	Rtr1/RPAP2 family	4.0E-20	108	193

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8524.t1 MAHQGPSHALKTSLPETYAAINAQRPPPSYLYPTQEEQDKYLEGRPGATQQHLEVALEHAQQIQTQKDAEDVILN RILELLELPSSPTADPAAPSQEDAVKLKYSLAPFRPSDYDNLILERNFEDLCGYALCPHKHRKQDNGPRGGFQFK YGPKGSGPGGRGRSVEIVSQDRIEKWCSDACAERALWIRVQLSEKPVWERRAGDTRGTSILLLEEARAKRLKAPA ATSSISSVVDDLQSMGLGNRNRSRELALERGDTSLIRPDGRVNVDIRENQRGSQQVAAAPQMRPEDARGGSIEGY VPRERRDVDQDGDIDLLDRI*
Coding	>Pro_DTO377G3_2\|g8524.t1 ATGGCACACCAAGGGCCAAGTCACGCTCTCAAGACCTCTCTTCCCGAGACATATGCCGCGATCAATGCCCAGCGA CCCCCACCTTCATACCTATACCCTACACAAGAAGAGCAAGACAAATACCTAGAAGGTAGGCCCGGTGCGACCCAG CAGCACCTCGAAGTCGCACTGGAACACGCGCAGCAGATTCAGACCCAAAAGGATGCCGAAGATGTCATCCTTAAC CGCATCCTTGAGCTCCTCGAGCTCCCCTCTTCTCCGACAGCGGACCCAGCCGCGCCGTCGCAAGAAGATGCTGTA AAACTCAAATATTCGCTAGCCCCATTTCGCCCCAGCGACTACGACAATCTGATCCTGGAGCGAAACTTCGAAGAC TTGTGCGGGTATGCTCTATGTCCCCACAAGCATCGCAAGCAAGACAACGGCCCGCGAGGCGGGTTCCAGTTTAAA TACGGTCCTAAAGGAAGTGGGCCAGGAGGGCGTGGACGCAGCGTGGAGATTGTTTCACAGGACCGCATCGAAAAG TGGTGCTCGGATGCATGCGCAGAGCGAGCTCTTTGGATCCGGGTGCAGCTATCTGAGAAGCCTGTGTGGGAACGA CGGGCGGGCGATACGCGGGGCACGTCTATTCTATTACTCGAGGAAGCTCGCGCCAAGCGCTTGAAGGCACCCGCC GCTACTAGCAGTATCTCATCCGTTGTGGATGATTTACAGAGCATGGGACTTGGGAATCGCAATCGGTCCCGGGAG CTTGCGTTGGAACGCGGCGATACCAGCTTGATTCGTCCGGATGGACGTGTTAACGTTGATATTAGAGAGAATCAA CGTGGTTCTCAGCAGGTGGCTGCCGCTCCACAGATGCGACCGGAGGATGCAAGGGGCGGTTCCATTGAAGGATAC GTGCCCAGGGAGCGACGAGACGTCGATCAAGATGGAGACATAGATTTGCTCGATCGGATCTGA
Transcript	>Pro_DTO377G3_2\|g8524.t1 ATGGCACACCAAGGGCCAAGTCACGCTCTCAAGACCTCTCTTCCCGAGACATATGCCGCGATCAATGCCCAGCGA CCCCCACCTTCATACCTATACCCTACACAAGAAGAGCAAGACAAATACCTAGAAGGTAGGCCCGGTGCGACCCAG CAGCACCTCGAAGTCGCACTGGAACACGCGCAGCAGATTCAGACCCAAAAGGATGCCGAAGATGTCATCCTTAAC CGCATCCTTGAGCTCCTCGAGCTCCCCTCTTCTCCGACAGCGGACCCAGCCGCGCCGTCGCAAGAAGATGCTGTA AAACTCAAATATTCGCTAGCCCCATTTCGCCCCAGCGACTACGACAATCTGATCCTGGAGCGAAACTTCGAAGAC TTGTGCGGGTATGCTCTATGTCCCCACAAGCATCGCAAGCAAGACAACGGCCCGCGAGGCGGGTTCCAGTTTAAA TACGGTCCTAAAGGAAGTGGGCCAGGAGGGCGTGGACGCAGCGTGGAGATTGTTTCACAGGACCGCATCGAAAAG TGGTGCTCGGATGCATGCGCAGAGCGAGCTCTTTGGATCCGGGTGCAGCTATCTGAGAAGCCTGTGTGGGAACGA CGGGCGGGCGATACGCGGGGCACGTCTATTCTATTACTCGAGGAAGCTCGCGCCAAGCGCTTGAAGGCACCCGCC GCTACTAGCAGTATCTCATCCGTTGTGGATGATTTACAGAGCATGGGACTTGGGAATCGCAATCGGTCCCGGGAG CTTGCGTTGGAACGCGGCGATACCAGCTTGATTCGTCCGGATGGACGTGTTAACGTTGATATTAGAGAGAATCAA CGTGGTTCTCAGCAGGTGGCTGCCGCTCCACAGATGCGACCGGAGGATGCAAGGGGCGGTTCCATTGAAGGATAC GTGCCCAGGGAGCGACGAGACGTCGATCAAGATGGAGACATAGATTTGCTCGATCGGATCTGA
Gene	>Pro_DTO377G3_2\|g8524.t1 ATGGCACACCAAGGGCCAAGTCACGCTCTCAAGACCTCTCTTCCCGAGACATATGCCGCGATCAATGCCCAGCGA CCCCCACCTTCATACCTATACCCTACACAAGAAGAGCAAGACAAATACCTAGAAGGTAGGCCCGGTGCGACCCAG CAGCACCTCGAAGTCGCACTGGAACACGCGCAGCAGATTCAGACCCAAAAGGATGCCGAAGATGTCATCCTTAAC CGCATCCTTGAGCTCCTCGAGCTCCCCTCTTCTCCGACAGCGGACCCAGCCGCGCCGTCGCAAGAAGATGCTGTA AAACTCAAATATTCGCTAGCCCCATTTCGCCCCAGCGACTACGACAATCTGATCCTGGAGCGAAACTTCGAAGAC TTGTGCGGGTATGCTCTATGTCCCCACAAGCATCGCAAGCAAGACAACGGCCCGCGAGGCGGGTTCCAGTTTAAA TACGGTCCTAAAGGAAGTGGGCCAGGAGGGCGTGGACGCAGCGTGGAGATTGTTTCACAGGACCGCATCGAAAAG TGGTGCTCGGATGCATGCGCAGAGCGAGCTCTTTGGATCCGGGTGCAGCTATCTGAGAAGCCTGTGTGGGAACGA CGGGCGGGCGATACGCGGGGCACGTCTATTCTATTACTCGAGGAAGCTCGCGCCAAGCGCTTGAAGGCACCCGCC GCTACTAGCAGTATCTCATCCGTTGTGGATGATTTACAGAGCATGGGACTTGGGAATCGCAATCGGTCCCGGGAG CTTGCGTTGGAACGCGGCGATACCAGCTTGATTCGTCCGGATGGACGTGTTAACGTTGATATTAGAGAGAATCAA CGTGGTTCTCAGCAGGTGGCTGCCGCTCCACAGATGCGACCGGAGGATGCAAGGGGCGGTTCCATTGAAGGATAC GTGCCCAGGGAGCGACGAGACGTCGATCAAGATGGAGACATAGATTTGCTCGATCGGATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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