Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g852.t1
Gene name
Locationscaffold_01:2269085..2271050
Strand-
Gene length (bp)1965
Transcript length (bp)1734
Coding sequence length (bp)1734
Protein length (aa) 578

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02492 cobW CobW/HypB/UreG, nucleotide-binding domain 4.8E-45 28 259
PF07683 CobW_C Cobalamin synthesis protein cobW C-terminal domain 1.0E-15 402 492

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g852.t1
MVINSGTDSVSYNVPAPLEEKPKTRQMPVTLLSGFLGSGKTTLLKHILKSPDHGLRIAVIVNDMSQLNIDATLIQ
NHKVSQTTEKLIRLQNGCICCTLRGDLLAELAALTKRNEVDYVIIESTGISEPMQVAETFTSEFSSAMLEAEDQI
ANDDEEARKILDEIVNLGGLHTMARLDTTVTVIDAFNLLSSFDTAEFLSDRYGREEIVPEDERTISDLMVDQIEF
ADVLILNKVETVDQATRDKLMHLLKLLNPVAKILESNYSQIDVREIINTNKFDFVRAASGPGWLQSLHEMTIQTT
GNGERLAPKPETLEYGINNFVYTARRPFHSRRLFALLHDKFIILQNNEVEEEEGDEEDGEEDEEEEEEDAMDTDS
DSGSVEDFDQPDPAVIMSNKRNHPAFGPVLRSKGFFWLTTRPWQFGEWSQAGGMLTLGCGGPWFAELPDEAWPED
KDVRESIQNDFQGAWGDRRQEIVFIGEGIDTGKITALLDECLLDDKDMKKWEKVMKNKKMSRDEKTDKLAKMWED
GWEEWPAFEVEEEEEEEEEQEPEQGKHRISEYLGQKKGTKHAHGHNHRMVAA*
Coding >Pro_DTO377G3_2|g852.t1
ATGGTCATCAATTCTGGAACAGACTCGGTCTCCTACAATGTCCCAGCTCCGCTGGAGGAAAAGCCGAAGACACGG
CAGATGCCCGTGACCTTGCTTTCGGGATTCCTGGGAAGCGGCAAGACGACACTCCTCAAACACATCCTCAAGTCT
CCTGACCATGGGTTAAGGATCGCTGTCATCGTCAACGACATGAGCCAGCTGAACATCGACGCTACCCTCATCCAA
AACCACAAAGTCTCACAAACCACCGAGAAGCTTATTCGACTTCAAAACGGATGCATCTGTTGCACTCTGCGGGGA
GACTTGCTGGCTGAACTGGCAGCTCTGACCAAGCGAAATGAGGTTGACTATGTCATCATTGAGTCGACTGGTATT
AGCGAGCCTATGCAAGTGGCTGAGACTTTCACGTCGGAGTTTAGCTCGGCCATGTTGGAAGCTGAAGATCAGATT
GCGAATGATGATGAGGAAGCAAGAAAGATCCTGGATGAAATTGTGAACCTAGGTGGCTTGCACACAATGGCTCGG
TTAGACACTACCGTCACTGTTATTGATGCCTTCAACTTGCTTTCCAGCTTCGACACAGCAGAGTTCCTATCTGAC
CGCTATGGGAGGGAAGAGATTGTCCCCGAGGATGAGCGCACTATATCTGATCTGATGGTGGATCAAATTGAGTTC
GCCGATGTGTTGATTCTCAATAAGGTCGAGACAGTTGACCAAGCAACCCGCGATAAGCTCATGCATTTGCTCAAG
CTGCTGAACCCAGTCGCAAAGATCCTCGAGTCAAACTACTCCCAAATAGATGTCCGGGAAATTATCAACACAAAC
AAATTTGATTTCGTCCGTGCTGCTTCTGGTCCTGGGTGGCTGCAGAGTCTGCACGAAATGACGATACAGACAACA
GGCAATGGTGAGCGGTTGGCACCAAAGCCAGAGACCTTGGAGTACGGTATCAACAACTTCGTCTACACTGCCCGT
CGACCCTTCCATTCACGCCGCCTCTTTGCTCTTCTTCATGACAAGTTCATCATTCTCCAGAACAATGAAGTCGAA
GAAGAAGAAGGCGACGAGGAAGACGGGGAGGAAGACGAAGAAGAAGAGGAAGAAGATGCAATGGATACAGACTCC
GACTCCGGGTCAGTGGAAGACTTTGACCAGCCTGATCCAGCGGTCATTATGAGCAATAAGCGTAACCACCCGGCC
TTTGGTCCAGTTCTCCGCTCCAAGGGCTTCTTCTGGCTCACAACCAGACCCTGGCAATTTGGAGAATGGAGCCAA
GCAGGTGGTATGCTGACTCTTGGATGCGGTGGGCCTTGGTTTGCTGAACTCCCCGATGAGGCTTGGCCAGAAGAC
AAGGATGTGCGGGAATCCATCCAAAATGATTTCCAAGGTGCCTGGGGCGACCGTCGCCAGGAAATAGTGTTCATT
GGTGAAGGTATTGACACTGGCAAGATCACTGCTCTGCTGGATGAGTGTCTTCTAGATGATAAAGATATGAAGAAG
TGGGAGAAGGTGATGAAGAACAAGAAAATGAGCAGAGACGAGAAAACAGATAAGTTAGCAAAGATGTGGGAAGAT
GGTTGGGAGGAATGGCCTGCATTTGAGGTCGAGGAAGAGGAAGAGGAAGAAGAAGAGCAGGAGCCGGAGCAGGGC
AAGCATCGTATCAGCGAGTATCTGGGTCAGAAAAAAGGGACTAAACATGCTCATGGACACAACCACCGGATGGTT
GCCGCATGA
Transcript >Pro_DTO377G3_2|g852.t1
ATGGTCATCAATTCTGGAACAGACTCGGTCTCCTACAATGTCCCAGCTCCGCTGGAGGAAAAGCCGAAGACACGG
CAGATGCCCGTGACCTTGCTTTCGGGATTCCTGGGAAGCGGCAAGACGACACTCCTCAAACACATCCTCAAGTCT
CCTGACCATGGGTTAAGGATCGCTGTCATCGTCAACGACATGAGCCAGCTGAACATCGACGCTACCCTCATCCAA
AACCACAAAGTCTCACAAACCACCGAGAAGCTTATTCGACTTCAAAACGGATGCATCTGTTGCACTCTGCGGGGA
GACTTGCTGGCTGAACTGGCAGCTCTGACCAAGCGAAATGAGGTTGACTATGTCATCATTGAGTCGACTGGTATT
AGCGAGCCTATGCAAGTGGCTGAGACTTTCACGTCGGAGTTTAGCTCGGCCATGTTGGAAGCTGAAGATCAGATT
GCGAATGATGATGAGGAAGCAAGAAAGATCCTGGATGAAATTGTGAACCTAGGTGGCTTGCACACAATGGCTCGG
TTAGACACTACCGTCACTGTTATTGATGCCTTCAACTTGCTTTCCAGCTTCGACACAGCAGAGTTCCTATCTGAC
CGCTATGGGAGGGAAGAGATTGTCCCCGAGGATGAGCGCACTATATCTGATCTGATGGTGGATCAAATTGAGTTC
GCCGATGTGTTGATTCTCAATAAGGTCGAGACAGTTGACCAAGCAACCCGCGATAAGCTCATGCATTTGCTCAAG
CTGCTGAACCCAGTCGCAAAGATCCTCGAGTCAAACTACTCCCAAATAGATGTCCGGGAAATTATCAACACAAAC
AAATTTGATTTCGTCCGTGCTGCTTCTGGTCCTGGGTGGCTGCAGAGTCTGCACGAAATGACGATACAGACAACA
GGCAATGGTGAGCGGTTGGCACCAAAGCCAGAGACCTTGGAGTACGGTATCAACAACTTCGTCTACACTGCCCGT
CGACCCTTCCATTCACGCCGCCTCTTTGCTCTTCTTCATGACAAGTTCATCATTCTCCAGAACAATGAAGTCGAA
GAAGAAGAAGGCGACGAGGAAGACGGGGAGGAAGACGAAGAAGAAGAGGAAGAAGATGCAATGGATACAGACTCC
GACTCCGGGTCAGTGGAAGACTTTGACCAGCCTGATCCAGCGGTCATTATGAGCAATAAGCGTAACCACCCGGCC
TTTGGTCCAGTTCTCCGCTCCAAGGGCTTCTTCTGGCTCACAACCAGACCCTGGCAATTTGGAGAATGGAGCCAA
GCAGGTGGTATGCTGACTCTTGGATGCGGTGGGCCTTGGTTTGCTGAACTCCCCGATGAGGCTTGGCCAGAAGAC
AAGGATGTGCGGGAATCCATCCAAAATGATTTCCAAGGTGCCTGGGGCGACCGTCGCCAGGAAATAGTGTTCATT
GGTGAAGGTATTGACACTGGCAAGATCACTGCTCTGCTGGATGAGTGTCTTCTAGATGATAAAGATATGAAGAAG
TGGGAGAAGGTGATGAAGAACAAGAAAATGAGCAGAGACGAGAAAACAGATAAGTTAGCAAAGATGTGGGAAGAT
GGTTGGGAGGAATGGCCTGCATTTGAGGTCGAGGAAGAGGAAGAGGAAGAAGAAGAGCAGGAGCCGGAGCAGGGC
AAGCATCGTATCAGCGAGTATCTGGGTCAGAAAAAAGGGACTAAACATGCTCATGGACACAACCACCGGATGGTT
GCCGCATGA
Gene >Pro_DTO377G3_2|g852.t1
ATGGTCATCAATTCTGGAACAGACTCGGTCTCCTACAATGTCCCAGCTCCGCTGGAGGAAAAGCCGAAGACACGG
CAGATGCCCGTGACCTTGCTTTCGGGATTCCTGGTATGAAACAGCAGTTGTATGAACGTTGACTCATGTCCATGG
ACACTGACATCCATGTGTAGGGAAGCGGCAAGACGACACTCCTCAAACACATCCTCAAGTCTCCTGACCATGGGT
TAAGGATCGCTGTCATCGTCAACGACATGAGCCAGTGAGTTCCACATCGAACGAAGAATATAGGATGCAAGCTAA
TTGCTTCGTTCCATTAGGCTGAACATCGACGCTACCCTCATCCAAAACCACAAAGTCTCACAAACCACCGAGAAG
CTTATTCGACTTCAAAACGGATGCATCTGTTGCACTCTGCGGGGAGACTTGCTGGCTGAACTGGCAGCTCTGACC
AAGCGAAATGAGGTTGACTATGTCATCATTGAGTCGACTGGTATTAGCGAGCCTATGCAAGTGGCTGAGACTTTC
ACGTCGGAGTTTAGCTCGGCCATGTTGGAAGCTGAAGATCAGATTGCGAATGATGATGAGGAAGCAAGAAAGATC
CTGGATGAAATGTATTGTTTCTTCACCACATCTCCGCTTATGATGGGCTTGCTGACATGTTTTGACAACATAGTG
TGAACCTAGGTGGCTTGCACACAATGGCTCGGTTAGACACTACCGTCACTGTTATTGATGCCTTCAACTTGCTTT
CCAGCTTCGACACAGCAGAGTTCCTATCTGACCGCTATGGGAGGGAAGAGATTGTCCCCGAGGATGAGCGCACTA
TATCTGATCTGATGGTGGATCAAATTGAGTTCGCCGATGTGTTGATTCTCAATAAGGTCGAGACAGTTGACCAAG
CAACCCGCGATAAGCTCATGCATTTGCTCAAGCTGCTGAACCCAGTCGCAAAGATCCTCGAGTCAAACTACTCCC
AAATAGATGTCCGGGAAATTATCAACACAAACAAATTTGATTTCGTCCGTGCTGCTTCTGGTCCTGGGTGGCTGC
AGAGTCTGCACGAAATGACGATACAGACAACAGGCAATGGTGAGCGGTTGGCACCAAAGCCAGAGACCTTGGAGT
AAGTTTGTCAGTTCTTTATTCATGAATCATTTACTGATCGATTACAGGTACGGTATCAACAACTTCGTCTACACT
GCCCGTCGACCCTTCCATTCACGCCGCCTCTTTGCTCTTCTTCATGACAAGTTCATCATTCTCCAGAACAATGAA
GTCGAAGAAGAAGAAGGCGACGAGGAAGACGGGGAGGAAGACGAAGAAGAAGAGGAAGAAGATGCAATGGATACA
GACTCCGACTCCGGGTCAGTGGAAGACTTTGACCAGCCTGATCCAGCGGTCATTATGAGCAATAAGCGTAACCAC
CCGGCCTTTGGTCCAGTTCTCCGCTCCAAGGGCTTCTTCTGGCTCACAACCAGACCCTGGCAATTTGGAGAATGG
AGCCAAGCAGGTGGTATGCTGACTCTTGGATGCGGTGGGCCTTGGTTTGCTGAACTCCCCGATGAGGCTTGGCCA
GAAGACAAGGATGTGCGGGAATCCATCCAAAATGATTTCCAAGGTGCCTGGGGCGACCGTCGCCAGGAAATAGTG
TTCATTGGTGAAGGTATTGACACTGGCAAGATCACTGCTCTGCTGGATGAGTGTCTTCTAGATGATAAAGATATG
AAGAAGTGGGAGAAGGTGATGAAGAACAAGAAAATGAGCAGAGACGAGAAAACAGATAAGTTAGCAAAGATGTGG
GAAGATGGTTGGGAGGAATGGCCTGCATTTGAGGTCGAGGAAGAGGAAGAGGAAGAAGAAGAGCAGGAGCCGGAG
CAGGGCAAGCATCGTATCAGCGAGTATCTGGGTCAGAAAAAAGGGACTAAACATGCTCATGGACACAACCACCGG
ATGGTTGCCGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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