Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8487.t1
Gene name
Locationscaffold_33:203555..204764
Strand-
Gene length (bp)1209
Transcript length (bp)1209
Coding sequence length (bp)1209
Protein length (aa) 403

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05189 RTC_insert RNA 3'-terminal phosphate cyclase (RTC), insert domain 3.0E-27 205 317
PF01137 RTC RNA 3'-terminal phosphate cyclase 8.6E-27 12 340

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8487.t1
MATSQPPLRFTSHHNLVYRLVLSTLTGRTVHISQIRSSSPTNPGLAPHEISFLRLLDAITNGSQMEISYTGTVLV
YKPGLITGSTAGTGASGGMITYELPSNCNRGLSYFLIPLCLLAPFAKAPMKVLFTGPGVITSSTQTGDMSVDSVR
TAILPLYKQFGIFNNIELRILRRSNTGPTGRGGGGEVQLVFGHQVRLPKTLHLMNAGRIKRIRGVVYSVGVSGSN
NARMIETARGILNPLSPDTYIFSDVASAPLVPAPDKTNPQAKKKIGLGFGLSLVAESSTGCLFSADVASPPSGGQ
APEEVGKQCAFQLLETVAKGGCVAPAAATTMFTLMTMGSEDVGRLQVGRDVIADPNVVQLARDLSKFGAPGWGIR
DAPDNGDGDVIVSIVGRGIGNVGRKIA*
Coding >Pro_DTO377G3_2|g8487.t1
ATGGCCACCTCTCAACCCCCCCTTCGGTTCACATCCCATCATAATTTGGTATATCGCCTGGTTTTGTCCACCCTC
ACCGGCCGCACAGTTCACATCTCCCAAATTCGTTCTTCGTCGCCCACGAACCCTGGTCTTGCGCCTCATGAAATT
TCTTTCCTCCGCCTTCTAGATGCAATAACCAATGGCTCTCAAATGGAGATCTCATACACAGGTACTGTGCTTGTC
TATAAGCCGGGTCTAATCACCGGCAGCACGGCCGGTACTGGAGCCAGCGGCGGCATGATCACCTACGAGCTTCCT
TCAAACTGTAACCGTGGTCTCAGTTACTTCCTGATCCCTCTATGTCTGCTGGCCCCATTCGCCAAAGCACCCATG
AAGGTGCTCTTCACAGGACCTGGTGTGATCACATCGTCGACACAGACTGGAGATATGTCCGTCGACAGTGTTCGC
ACAGCGATCCTCCCTCTGTACAAACAATTTGGTATCTTCAACAACATCGAGCTCCGTATCCTGAGGCGATCAAAC
ACTGGCCCCACTGGCAGGGGTGGCGGTGGTGAAGTGCAACTTGTGTTTGGCCACCAGGTCCGTCTGCCGAAGACT
CTGCACTTGATGAACGCAGGCCGCATCAAGCGCATCCGCGGTGTGGTATACTCGGTTGGTGTGTCTGGCTCGAAC
AACGCTCGCATGATTGAGACTGCCCGTGGTATCCTCAACCCACTCAGCCCTGATACTTATATTTTCTCCGACGTG
GCGTCTGCGCCTTTAGTACCAGCTCCGGATAAGACCAACCCCCAGGCAAAGAAAAAGATTGGCCTTGGGTTTGGT
TTGTCTTTGGTGGCAGAGTCTTCCACGGGCTGCCTCTTCTCGGCTGATGTGGCCTCTCCACCGTCGGGTGGTCAA
GCCCCCGAGGAAGTTGGAAAGCAGTGTGCATTCCAGCTTCTGGAGACGGTTGCCAAGGGTGGTTGTGTGGCTCCT
GCGGCTGCGACCACCATGTTCACTCTCATGACCATGGGATCGGAGGATGTCGGGCGGCTGCAGGTTGGCCGAGAT
GTGATTGCTGATCCCAACGTGGTCCAGCTCGCTCGAGATCTGTCCAAGTTTGGTGCCCCCGGCTGGGGTATCCGA
GACGCACCTGACAATGGAGATGGAGATGTGATTGTCAGCATCGTCGGCCGTGGCATCGGTAACGTCGGCAGAAAG
ATTGCTTAA
Transcript >Pro_DTO377G3_2|g8487.t1
ATGGCCACCTCTCAACCCCCCCTTCGGTTCACATCCCATCATAATTTGGTATATCGCCTGGTTTTGTCCACCCTC
ACCGGCCGCACAGTTCACATCTCCCAAATTCGTTCTTCGTCGCCCACGAACCCTGGTCTTGCGCCTCATGAAATT
TCTTTCCTCCGCCTTCTAGATGCAATAACCAATGGCTCTCAAATGGAGATCTCATACACAGGTACTGTGCTTGTC
TATAAGCCGGGTCTAATCACCGGCAGCACGGCCGGTACTGGAGCCAGCGGCGGCATGATCACCTACGAGCTTCCT
TCAAACTGTAACCGTGGTCTCAGTTACTTCCTGATCCCTCTATGTCTGCTGGCCCCATTCGCCAAAGCACCCATG
AAGGTGCTCTTCACAGGACCTGGTGTGATCACATCGTCGACACAGACTGGAGATATGTCCGTCGACAGTGTTCGC
ACAGCGATCCTCCCTCTGTACAAACAATTTGGTATCTTCAACAACATCGAGCTCCGTATCCTGAGGCGATCAAAC
ACTGGCCCCACTGGCAGGGGTGGCGGTGGTGAAGTGCAACTTGTGTTTGGCCACCAGGTCCGTCTGCCGAAGACT
CTGCACTTGATGAACGCAGGCCGCATCAAGCGCATCCGCGGTGTGGTATACTCGGTTGGTGTGTCTGGCTCGAAC
AACGCTCGCATGATTGAGACTGCCCGTGGTATCCTCAACCCACTCAGCCCTGATACTTATATTTTCTCCGACGTG
GCGTCTGCGCCTTTAGTACCAGCTCCGGATAAGACCAACCCCCAGGCAAAGAAAAAGATTGGCCTTGGGTTTGGT
TTGTCTTTGGTGGCAGAGTCTTCCACGGGCTGCCTCTTCTCGGCTGATGTGGCCTCTCCACCGTCGGGTGGTCAA
GCCCCCGAGGAAGTTGGAAAGCAGTGTGCATTCCAGCTTCTGGAGACGGTTGCCAAGGGTGGTTGTGTGGCTCCT
GCGGCTGCGACCACCATGTTCACTCTCATGACCATGGGATCGGAGGATGTCGGGCGGCTGCAGGTTGGCCGAGAT
GTGATTGCTGATCCCAACGTGGTCCAGCTCGCTCGAGATCTGTCCAAGTTTGGTGCCCCCGGCTGGGGTATCCGA
GACGCACCTGACAATGGAGATGGAGATGTGATTGTCAGCATCGTCGGCCGTGGCATCGGTAACGTCGGCAGAAAG
ATTGCTTAA
Gene >Pro_DTO377G3_2|g8487.t1
ATGGCCACCTCTCAACCCCCCCTTCGGTTCACATCCCATCATAATTTGGTATATCGCCTGGTTTTGTCCACCCTC
ACCGGCCGCACAGTTCACATCTCCCAAATTCGTTCTTCGTCGCCCACGAACCCTGGTCTTGCGCCTCATGAAATT
TCTTTCCTCCGCCTTCTAGATGCAATAACCAATGGCTCTCAAATGGAGATCTCATACACAGGTACTGTGCTTGTC
TATAAGCCGGGTCTAATCACCGGCAGCACGGCCGGTACTGGAGCCAGCGGCGGCATGATCACCTACGAGCTTCCT
TCAAACTGTAACCGTGGTCTCAGTTACTTCCTGATCCCTCTATGTCTGCTGGCCCCATTCGCCAAAGCACCCATG
AAGGTGCTCTTCACAGGACCTGGTGTGATCACATCGTCGACACAGACTGGAGATATGTCCGTCGACAGTGTTCGC
ACAGCGATCCTCCCTCTGTACAAACAATTTGGTATCTTCAACAACATCGAGCTCCGTATCCTGAGGCGATCAAAC
ACTGGCCCCACTGGCAGGGGTGGCGGTGGTGAAGTGCAACTTGTGTTTGGCCACCAGGTCCGTCTGCCGAAGACT
CTGCACTTGATGAACGCAGGCCGCATCAAGCGCATCCGCGGTGTGGTATACTCGGTTGGTGTGTCTGGCTCGAAC
AACGCTCGCATGATTGAGACTGCCCGTGGTATCCTCAACCCACTCAGCCCTGATACTTATATTTTCTCCGACGTG
GCGTCTGCGCCTTTAGTACCAGCTCCGGATAAGACCAACCCCCAGGCAAAGAAAAAGATTGGCCTTGGGTTTGGT
TTGTCTTTGGTGGCAGAGTCTTCCACGGGCTGCCTCTTCTCGGCTGATGTGGCCTCTCCACCGTCGGGTGGTCAA
GCCCCCGAGGAAGTTGGAAAGCAGTGTGCATTCCAGCTTCTGGAGACGGTTGCCAAGGGTGGTTGTGTGGCTCCT
GCGGCTGCGACCACCATGTTCACTCTCATGACCATGGGATCGGAGGATGTCGGGCGGCTGCAGGTTGGCCGAGAT
GTGATTGCTGATCCCAACGTGGTCCAGCTCGCTCGAGATCTGTCCAAGTTTGGTGCCCCCGGCTGGGGTATCCGA
GACGCACCTGACAATGGAGATGGAGATGTGATTGTCAGCATCGTCGGCCGTGGCATCGGTAACGTCGGCAGAAAG
ATTGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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