Protein ID | Pro_DTO377G3_2|g8474.t1 |
Gene name | |
Location | scaffold_33:172109..173231 |
Strand | - |
Gene length (bp) | 1122 |
Transcript length (bp) | 1122 |
Coding sequence length (bp) | 1122 |
Protein length (aa) | 374 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02678 | Pirin | Pirin | 1.8E-30 | 94 | 192 |
PF05726 | Pirin_C | Pirin C-terminal cupin domain | 7.8E-24 | 249 | 356 |
Orthofinder run ID | 2 |
Orthogroup | 4738 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8474.t1 MKLLLPLLICITAIFLAYNPSIKDSLKDSLVSFIQQQAPSLSEHLQTKNIVNQTNHHLNLETPTPTVFPITDMSV PRAIRQAFLAIEQAEGAGARVRRSIGTAKLRNFSPFLMLDHFTIGKGAGFPDHPHRGQETITYLLSGGVDHEDFA GNKGTIGPGDLQFMTAGRGIMHAEMPHENEDGSPNVGMQLWVDLPQKLKFCEPRYRDLRAEEIPLATVDEGRVKI KVISGQSHGVDSVRDLAYTPVWILDITIKPGGRISQPLPQGWNSFAYTLAGETVFGSNDSTRIVKEFTNVQFEQT GDFVELSVPDNAEKDARIFLVAGQPLDQKVVQYGPFVLNTQDEVYQAMLDYQTASNGFERSRNWQSEIGKRMG* |
Coding | >Pro_DTO377G3_2|g8474.t1 ATGAAACTACTTCTGCCACTTTTAATTTGTATCACAGCAATCTTCCTTGCCTATAACCCTTCTATCAAAGACTCT CTCAAGGACTCTTTGGTCTCATTTATCCAGCAACAAGCTCCTAGCCTGTCAGAGCACCTTCAGACCAAAAACATT GTCAATCAGACAAACCACCACCTGAACCTGGAAACCCCGACGCCCACAGTCTTCCCCATCACAGACATGTCCGTC CCTCGCGCTATCCGACAGGCATTCCTTGCCATCGAGCAAGCAGAAGGCGCAGGTGCCCGTGTGCGCCGCTCTATC GGAACTGCCAAGCTCCGCAACTTCAGTCCCTTCCTCATGCTTGACCACTTCACGATCGGTAAGGGCGCTGGCTTC CCAGACCACCCTCACCGCGGTCAAGAGACCATCACCTATTTGTTGTCCGGCGGCGTTGACCATGAAGACTTTGCC GGTAACAAGGGAACTATCGGACCCGGCGATCTGCAATTCATGACCGCAGGCCGCGGTATCATGCATGCTGAGATG CCCCACGAGAACGAAGACGGTAGCCCAAATGTCGGTATGCAGTTGTGGGTCGATCTGCCCCAGAAGCTGAAATTC TGTGAGCCTCGTTACCGTGATCTTCGCGCTGAGGAGATTCCCCTCGCGACAGTCGATGAGGGCCGCGTCAAGATC AAGGTCATCTCGGGCCAGTCGCACGGTGTTGACTCCGTGCGTGACTTGGCCTACACCCCTGTCTGGATCTTGGAT ATCACGATCAAGCCCGGTGGTCGTATATCGCAGCCCCTACCACAGGGATGGAACTCATTTGCTTACACCTTGGCT GGTGAGACTGTCTTTGGCTCGAATGATTCCACTCGCATCGTGAAGGAATTCACAAACGTTCAATTCGAGCAGACT GGTGACTTTGTTGAACTCTCTGTCCCGGATAACGCCGAGAAGGATGCCCGCATTTTCCTTGTGGCTGGTCAGCCA CTGGACCAGAAGGTTGTTCAGTATGGACCTTTTGTACTGAACACTCAGGATGAGGTTTACCAGGCGATGCTCGAC TACCAGACCGCCTCCAATGGATTTGAGAGGTCTCGAAACTGGCAGAGTGAGATTGGCAAGAGAATGGGATAA |
Transcript | >Pro_DTO377G3_2|g8474.t1 ATGAAACTACTTCTGCCACTTTTAATTTGTATCACAGCAATCTTCCTTGCCTATAACCCTTCTATCAAAGACTCT CTCAAGGACTCTTTGGTCTCATTTATCCAGCAACAAGCTCCTAGCCTGTCAGAGCACCTTCAGACCAAAAACATT GTCAATCAGACAAACCACCACCTGAACCTGGAAACCCCGACGCCCACAGTCTTCCCCATCACAGACATGTCCGTC CCTCGCGCTATCCGACAGGCATTCCTTGCCATCGAGCAAGCAGAAGGCGCAGGTGCCCGTGTGCGCCGCTCTATC GGAACTGCCAAGCTCCGCAACTTCAGTCCCTTCCTCATGCTTGACCACTTCACGATCGGTAAGGGCGCTGGCTTC CCAGACCACCCTCACCGCGGTCAAGAGACCATCACCTATTTGTTGTCCGGCGGCGTTGACCATGAAGACTTTGCC GGTAACAAGGGAACTATCGGACCCGGCGATCTGCAATTCATGACCGCAGGCCGCGGTATCATGCATGCTGAGATG CCCCACGAGAACGAAGACGGTAGCCCAAATGTCGGTATGCAGTTGTGGGTCGATCTGCCCCAGAAGCTGAAATTC TGTGAGCCTCGTTACCGTGATCTTCGCGCTGAGGAGATTCCCCTCGCGACAGTCGATGAGGGCCGCGTCAAGATC AAGGTCATCTCGGGCCAGTCGCACGGTGTTGACTCCGTGCGTGACTTGGCCTACACCCCTGTCTGGATCTTGGAT ATCACGATCAAGCCCGGTGGTCGTATATCGCAGCCCCTACCACAGGGATGGAACTCATTTGCTTACACCTTGGCT GGTGAGACTGTCTTTGGCTCGAATGATTCCACTCGCATCGTGAAGGAATTCACAAACGTTCAATTCGAGCAGACT GGTGACTTTGTTGAACTCTCTGTCCCGGATAACGCCGAGAAGGATGCCCGCATTTTCCTTGTGGCTGGTCAGCCA CTGGACCAGAAGGTTGTTCAGTATGGACCTTTTGTACTGAACACTCAGGATGAGGTTTACCAGGCGATGCTCGAC TACCAGACCGCCTCCAATGGATTTGAGAGGTCTCGAAACTGGCAGAGTGAGATTGGCAAGAGAATGGGATAA |
Gene | >Pro_DTO377G3_2|g8474.t1 ATGAAACTACTTCTGCCACTTTTAATTTGTATCACAGCAATCTTCCTTGCCTATAACCCTTCTATCAAAGACTCT CTCAAGGACTCTTTGGTCTCATTTATCCAGCAACAAGCTCCTAGCCTGTCAGAGCACCTTCAGACCAAAAACATT GTCAATCAGACAAACCACCACCTGAACCTGGAAACCCCGACGCCCACAGTCTTCCCCATCACAGACATGTCCGTC CCTCGCGCTATCCGACAGGCATTCCTTGCCATCGAGCAAGCAGAAGGCGCAGGTGCCCGTGTGCGCCGCTCTATC GGAACTGCCAAGCTCCGCAACTTCAGTCCCTTCCTCATGCTTGACCACTTCACGATCGGTAAGGGCGCTGGCTTC CCAGACCACCCTCACCGCGGTCAAGAGACCATCACCTATTTGTTGTCCGGCGGCGTTGACCATGAAGACTTTGCC GGTAACAAGGGAACTATCGGACCCGGCGATCTGCAATTCATGACCGCAGGCCGCGGTATCATGCATGCTGAGATG CCCCACGAGAACGAAGACGGTAGCCCAAATGTCGGTATGCAGTTGTGGGTCGATCTGCCCCAGAAGCTGAAATTC TGTGAGCCTCGTTACCGTGATCTTCGCGCTGAGGAGATTCCCCTCGCGACAGTCGATGAGGGCCGCGTCAAGATC AAGGTCATCTCGGGCCAGTCGCACGGTGTTGACTCCGTGCGTGACTTGGCCTACACCCCTGTCTGGATCTTGGAT ATCACGATCAAGCCCGGTGGTCGTATATCGCAGCCCCTACCACAGGGATGGAACTCATTTGCTTACACCTTGGCT GGTGAGACTGTCTTTGGCTCGAATGATTCCACTCGCATCGTGAAGGAATTCACAAACGTTCAATTCGAGCAGACT GGTGACTTTGTTGAACTCTCTGTCCCGGATAACGCCGAGAAGGATGCCCGCATTTTCCTTGTGGCTGGTCAGCCA CTGGACCAGAAGGTTGTTCAGTATGGACCTTTTGTACTGAACACTCAGGATGAGGTTTACCAGGCGATGCTCGAC TACCAGACCGCCTCCAATGGATTTGAGAGGTCTCGAAACTGGCAGAGTGAGATTGGCAAGAGAATGGGATAA |