Protein ID | Pro_DTO377G3_2|g8472.t1 |
Gene name | |
Location | scaffold_33:166049..168951 |
Strand | - |
Gene length (bp) | 2902 |
Transcript length (bp) | 2850 |
Coding sequence length (bp) | 2850 |
Protein length (aa) | 950 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00176 | SNF2-rel_dom | SNF2-related domain | 6.5E-53 | 354 | 681 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 2.8E-16 | 777 | 891 |
PF04851 | ResIII | Type III restriction enzyme, res subunit | 2.9E-06 | 341 | 514 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 1.3E-05 | 695 | 738 |
GO Term | Description | Terminal node |
---|---|---|
GO:0140658 | ATP-dependent chromatin remodeler activity | Yes |
GO:0046872 | metal ion binding | Yes |
GO:0016787 | hydrolase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0003677 | DNA binding | Yes |
GO:0000166 | nucleotide binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0008094 | ATP-dependent activity, acting on DNA | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0140657 | ATP-dependent activity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0003676 | nucleic acid binding | No |
GO:0003824 | catalytic activity | No |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
GO:0003674 | molecular_function | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0043169 | cation binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0140097 | catalytic activity, acting on DNA | No |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:1901265 | nucleoside phosphate binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8472.t1 MRHNLRPRTTIPDSDDDSQFSETSPRNSSPLRRSSRSAPLRAGGSSLSRSRPRVIQDSEADEDDYVVDSVTPGNS ASGRIEVVVPMKNESPSDSNSRSSLGNLTTGCSTPATSVGAAVTEPDTKVAIKTSARINAADRVKKLQSSALSLG ASQGGRKRSAAALAEDTGASDVSLTHASKKRAVKRPMGTLSVQNDLETSDAALAHALQMEEYDYPRPTTEQGSLV DKFVDEHLEYDSDPDSRPVSFSPLSPEPPGLLHSGVASSDTSEDPLEDGLDDDLHDSEADLPPSWEEQRKARRVE KDRKNLVYRHPTVGTMWDVLKAQPIIQPKEAKQPVSITRKLKPFQLEGLNWMIAQEKTEYRGGLLGDEMGMGKTI QAVSLIMSDFPQSDPTLVLVPPVALMQWVSEIKEYTDGKLKVLVYHNSDAKIKKLTPAEIRKYDVIMISYASLES IYRKQEKGFSRGATMVKADSVIHAVHYHRLILDEAHSIKSRTTGVARACFALEANYKWCLSGTPVQNRIGEFFSL LRFLQVKPFACYFCKQCDCEQLQWTSTKEGRCTECSHTGFMHISIFNKEILNPIIEGKTQRQRKEGLEKLRLITD HIMLRRMKQQHTTSMELPPKRIMLHNEFFGEIEQDFSRSIMTNSTRKFDTYVSEGVMLNNYANIFGLIMQMRQVA NHPDLILKKKAQLGFNVAVCCICDEPAEDGIRSQCRHEFCRQCAKDYIQSFQDDSKHVDCPRCHIALSIDLEQPT LAEYEESVKKNSIINRISMESWTSSTKIEMLLYELFKERSKSHTPKSIIFSQFTSMLQLVEWRLRHAGFNTVMLD GSMTPAQRQKSIEHFMTKPEVEVFLVSLKAGGVALNLTEASRVFIIDPWWNPAAEWQSADRSHRIGQQRPCVVTR LCIEDSVESRIIQLQEKKANLIRGTLNKDQAAALEKLTPEDMQFLFRGT* |
Coding | >Pro_DTO377G3_2|g8472.t1 ATGAGGCACAATCTGAGACCCAGAACCACAATCCCTGATTCAGACGATGATTCACAGTTCAGCGAGACGTCACCA AGAAATTCATCCCCCCTCCGTCGATCAAGTCGATCGGCACCTCTGCGAGCTGGTGGGTCATCCCTTTCTCGTTCT CGCCCTCGCGTCATCCAAGATTCCGAGGCAGATGAGGACGACTATGTCGTGGATTCGGTGACACCGGGTAATTCT GCTTCGGGCAGGATTGAGGTGGTGGTACCCATGAAAAATGAATCGCCCAGTGACTCCAATTCCCGGAGTTCGCTG GGGAATCTGACCACGGGCTGCAGTACCCCGGCTACTAGCGTTGGTGCTGCAGTTACTGAACCTGACACCAAGGTT GCGATAAAGACTTCGGCGCGTATCAATGCCGCTGATCGCGTAAAGAAACTACAGTCGAGCGCACTATCCCTTGGA GCTTCCCAAGGAGGAAGAAAACGATCCGCAGCGGCACTGGCGGAGGATACTGGTGCCTCCGATGTTTCACTAACT CATGCCTCCAAAAAAAGGGCGGTAAAACGGCCTATGGGTACTCTGTCTGTCCAAAATGATCTTGAGACTTCTGAT GCGGCTCTGGCTCATGCCCTTCAAATGGAGGAATACGACTACCCGCGCCCGACAACAGAACAAGGTTCGCTCGTA GACAAATTCGTTGATGAACACTTGGAATACGACTCGGACCCAGATTCTAGACCAGTGTCCTTCTCTCCGTTGAGC CCTGAGCCACCTGGGTTACTTCATTCTGGCGTTGCTTCTTCGGATACATCAGAAGATCCTCTTGAGGACGGTCTC GATGACGATCTGCACGACTCTGAAGCAGATCTGCCCCCGAGCTGGGAAGAGCAGCGGAAAGCTCGCCGTGTAGAA AAAGACCGAAAGAACCTTGTGTACAGGCATCCCACAGTTGGTACCATGTGGGATGTGCTCAAAGCACAGCCTATC ATCCAGCCAAAGGAAGCCAAGCAACCTGTCTCTATAACTCGCAAACTCAAGCCATTCCAACTAGAGGGCTTGAAC TGGATGATAGCTCAGGAAAAGACTGAATACAGGGGTGGTTTGTTGGGCGATGAGATGGGCATGGGAAAGACTATT CAAGCAGTTTCACTCATCATGTCCGATTTCCCCCAGTCTGACCCGACCCTCGTTCTCGTCCCACCGGTCGCTTTG ATGCAGTGGGTATCCGAGATCAAGGAATACACGGATGGCAAGCTGAAGGTCTTGGTCTACCACAACTCGGACGCG AAAATCAAAAAGTTGACGCCGGCTGAGATTCGTAAGTACGATGTCATCATGATTTCCTACGCAAGTCTCGAATCC ATTTACCGCAAGCAGGAGAAAGGCTTCTCTCGCGGTGCAACGATGGTCAAAGCAGACAGTGTCATCCACGCAGTC CACTATCACCGCCTCATCCTTGACGAGGCGCATAGTATCAAATCACGTACCACGGGTGTTGCTAGGGCATGTTTT GCCTTGGAGGCCAATTACAAGTGGTGCCTATCGGGCACACCCGTACAGAACCGGATTGGAGAATTCTTCTCCCTT CTGCGATTTCTACAAGTCAAGCCATTTGCATGCTACTTTTGTAAGCAGTGCGATTGCGAACAACTCCAGTGGACC TCGACTAAAGAGGGGCGTTGTACTGAGTGCTCTCACACTGGGTTTATGCATATTTCGATCTTCAACAAGGAGATT CTTAACCCAATTATTGAAGGGAAAACTCAGCGGCAACGTAAAGAGGGTCTCGAAAAGCTCCGTCTCATCACCGAT CATATCATGCTTCGCCGGATGAAGCAACAGCATACAACGTCGATGGAGCTCCCACCTAAACGTATCATGTTACAC AATGAATTTTTCGGTGAGATCGAACAAGATTTCTCACGCAGCATTATGACGAACTCGACAAGAAAATTCGACACC TATGTCAGCGAGGGTGTCATGTTGAATAACTATGCCAACATCTTCGGGTTGATCATGCAGATGCGCCAAGTTGCA AACCATCCCGATCTCATTCTGAAGAAAAAAGCGCAATTAGGGTTCAACGTTGCTGTATGCTGTATCTGTGACGAG CCCGCAGAAGATGGCATTCGGTCTCAGTGCCGTCATGAATTCTGTCGTCAATGTGCCAAGGACTACATTCAGTCA TTCCAGGACGATAGCAAGCATGTTGACTGCCCACGGTGCCATATTGCCCTTTCCATCGATTTGGAACAACCTACC CTTGCCGAATACGAAGAGTCTGTCAAGAAGAATTCCATCATCAACCGCATCTCCATGGAGAGCTGGACCTCTTCC ACCAAAATCGAGATGCTCCTTTATGAACTTTTCAAGGAGCGAAGCAAAAGTCACACCCCTAAATCTATCATCTTC TCCCAGTTCACATCCATGCTACAACTGGTGGAATGGCGGCTACGCCATGCCGGATTCAACACCGTGATGCTGGAT GGATCGATGACCCCAGCACAGCGGCAAAAGTCCATTGAACATTTCATGACTAAACCCGAGGTTGAGGTTTTCTTA GTCTCTCTCAAGGCCGGTGGCGTGGCACTTAACCTCACGGAAGCCTCCCGAGTTTTTATTATCGACCCATGGTGG AATCCCGCGGCAGAATGGCAAAGCGCCGATCGCAGTCACCGAATTGGCCAGCAGCGGCCTTGTGTGGTCACTCGT CTCTGTATCGAGGACTCTGTCGAGTCCCGAATCATTCAACTTCAAGAGAAGAAGGCCAACCTCATCCGGGGTACC CTGAATAAAGATCAAGCGGCGGCATTGGAAAAACTGACCCCGGAGGACATGCAATTCCTCTTCCGAGGAACTTAG |
Transcript | >Pro_DTO377G3_2|g8472.t1 ATGAGGCACAATCTGAGACCCAGAACCACAATCCCTGATTCAGACGATGATTCACAGTTCAGCGAGACGTCACCA AGAAATTCATCCCCCCTCCGTCGATCAAGTCGATCGGCACCTCTGCGAGCTGGTGGGTCATCCCTTTCTCGTTCT CGCCCTCGCGTCATCCAAGATTCCGAGGCAGATGAGGACGACTATGTCGTGGATTCGGTGACACCGGGTAATTCT GCTTCGGGCAGGATTGAGGTGGTGGTACCCATGAAAAATGAATCGCCCAGTGACTCCAATTCCCGGAGTTCGCTG GGGAATCTGACCACGGGCTGCAGTACCCCGGCTACTAGCGTTGGTGCTGCAGTTACTGAACCTGACACCAAGGTT GCGATAAAGACTTCGGCGCGTATCAATGCCGCTGATCGCGTAAAGAAACTACAGTCGAGCGCACTATCCCTTGGA GCTTCCCAAGGAGGAAGAAAACGATCCGCAGCGGCACTGGCGGAGGATACTGGTGCCTCCGATGTTTCACTAACT CATGCCTCCAAAAAAAGGGCGGTAAAACGGCCTATGGGTACTCTGTCTGTCCAAAATGATCTTGAGACTTCTGAT GCGGCTCTGGCTCATGCCCTTCAAATGGAGGAATACGACTACCCGCGCCCGACAACAGAACAAGGTTCGCTCGTA GACAAATTCGTTGATGAACACTTGGAATACGACTCGGACCCAGATTCTAGACCAGTGTCCTTCTCTCCGTTGAGC CCTGAGCCACCTGGGTTACTTCATTCTGGCGTTGCTTCTTCGGATACATCAGAAGATCCTCTTGAGGACGGTCTC GATGACGATCTGCACGACTCTGAAGCAGATCTGCCCCCGAGCTGGGAAGAGCAGCGGAAAGCTCGCCGTGTAGAA AAAGACCGAAAGAACCTTGTGTACAGGCATCCCACAGTTGGTACCATGTGGGATGTGCTCAAAGCACAGCCTATC ATCCAGCCAAAGGAAGCCAAGCAACCTGTCTCTATAACTCGCAAACTCAAGCCATTCCAACTAGAGGGCTTGAAC TGGATGATAGCTCAGGAAAAGACTGAATACAGGGGTGGTTTGTTGGGCGATGAGATGGGCATGGGAAAGACTATT CAAGCAGTTTCACTCATCATGTCCGATTTCCCCCAGTCTGACCCGACCCTCGTTCTCGTCCCACCGGTCGCTTTG ATGCAGTGGGTATCCGAGATCAAGGAATACACGGATGGCAAGCTGAAGGTCTTGGTCTACCACAACTCGGACGCG AAAATCAAAAAGTTGACGCCGGCTGAGATTCGTAAGTACGATGTCATCATGATTTCCTACGCAAGTCTCGAATCC ATTTACCGCAAGCAGGAGAAAGGCTTCTCTCGCGGTGCAACGATGGTCAAAGCAGACAGTGTCATCCACGCAGTC CACTATCACCGCCTCATCCTTGACGAGGCGCATAGTATCAAATCACGTACCACGGGTGTTGCTAGGGCATGTTTT GCCTTGGAGGCCAATTACAAGTGGTGCCTATCGGGCACACCCGTACAGAACCGGATTGGAGAATTCTTCTCCCTT CTGCGATTTCTACAAGTCAAGCCATTTGCATGCTACTTTTGTAAGCAGTGCGATTGCGAACAACTCCAGTGGACC TCGACTAAAGAGGGGCGTTGTACTGAGTGCTCTCACACTGGGTTTATGCATATTTCGATCTTCAACAAGGAGATT CTTAACCCAATTATTGAAGGGAAAACTCAGCGGCAACGTAAAGAGGGTCTCGAAAAGCTCCGTCTCATCACCGAT CATATCATGCTTCGCCGGATGAAGCAACAGCATACAACGTCGATGGAGCTCCCACCTAAACGTATCATGTTACAC AATGAATTTTTCGGTGAGATCGAACAAGATTTCTCACGCAGCATTATGACGAACTCGACAAGAAAATTCGACACC TATGTCAGCGAGGGTGTCATGTTGAATAACTATGCCAACATCTTCGGGTTGATCATGCAGATGCGCCAAGTTGCA AACCATCCCGATCTCATTCTGAAGAAAAAAGCGCAATTAGGGTTCAACGTTGCTGTATGCTGTATCTGTGACGAG CCCGCAGAAGATGGCATTCGGTCTCAGTGCCGTCATGAATTCTGTCGTCAATGTGCCAAGGACTACATTCAGTCA TTCCAGGACGATAGCAAGCATGTTGACTGCCCACGGTGCCATATTGCCCTTTCCATCGATTTGGAACAACCTACC CTTGCCGAATACGAAGAGTCTGTCAAGAAGAATTCCATCATCAACCGCATCTCCATGGAGAGCTGGACCTCTTCC ACCAAAATCGAGATGCTCCTTTATGAACTTTTCAAGGAGCGAAGCAAAAGTCACACCCCTAAATCTATCATCTTC TCCCAGTTCACATCCATGCTACAACTGGTGGAATGGCGGCTACGCCATGCCGGATTCAACACCGTGATGCTGGAT GGATCGATGACCCCAGCACAGCGGCAAAAGTCCATTGAACATTTCATGACTAAACCCGAGGTTGAGGTTTTCTTA GTCTCTCTCAAGGCCGGTGGCGTGGCACTTAACCTCACGGAAGCCTCCCGAGTTTTTATTATCGACCCATGGTGG AATCCCGCGGCAGAATGGCAAAGCGCCGATCGCAGTCACCGAATTGGCCAGCAGCGGCCTTGTGTGGTCACTCGT CTCTGTATCGAGGACTCTGTCGAGTCCCGAATCATTCAACTTCAAGAGAAGAAGGCCAACCTCATCCGGGGTACC CTGAATAAAGATCAAGCGGCGGCATTGGAAAAACTGACCCCGGAGGACATGCAATTCCTCTTCCGAGGAACTTAG |
Gene | >Pro_DTO377G3_2|g8472.t1 ATGAGGCACAATCTGAGACCCAGAACCACAATCCCTGATTCAGACGATGATTCACAGTTCAGCGAGACGTCACCA AGAAATTCATCCCCCCTCCGTCGATCAAGTCGATCGGCACCTCTGCGAGCTGGTGGGTCATCCCTTTCTCGTTCT CGCCCTCGCGTCATCCAAGATTCCGAGGCAGATGAGGACGACTATGTCGTGGATTCGGTGACACCGGGTAATTCT GCTTCGGGCAGGATTGAGGTGGTGGTACCCATGAAAAATGAATCGCCCAGTGACTCCAATTCCCGGAGTTCGCTG GGGAATCTGACCACGGGCTGCAGTACCCCGGCTACTAGCGTTGGTGCTGCAGTTACTGAACCTGACACCAAGGTT GCGATAAAGACTTCGGCGCGTATCAATGCCGCTGATCGCGTAAAGAAACTACAGTCGAGCGCACTATCCCTTGGA GCTTCCCAAGGAGGAAGAAAACGATCCGCAGCGGCACTGGCGGAGGATACTGGTGCCTCCGATGTTTCACTAACT CATGCCTCCAAAAAAAGGGCGGTAAAACGGCCTATGGGTACTCTGTCTGTCCAAAATGATCTTGAGACTTCTGAT GCGGCTCTGGCTCATGCCCTTCAAATGGAGGAATACGACTACCCGCGCCCGACAACAGAACAAGGTTCGCTCGTA GACAAATTCGTTGATGAACACTTGGAATACGACTCGGACCCAGATTCTAGACCAGTGTCCTTCTCTCCGTTGAGC CCTGAGCCACCTGGGTTACTTCATTCTGGCGTTGCTTCTTCGGATACATCAGAAGATCCTCTTGAGGACGGTCTC GATGACGATCTGCACGACTCTGAAGCAGATCTGCCCCCGAGCTGGGAAGAGCAGCGGAAAGCTCGCCGTGTAAGC CGAGGGTTCTTTTCCCACGTGCCTTCCATGACTAACCATCCCCTAGGTAGAAAAAGACCGAAAGAACCTTGTGTA CAGGCATCCCACAGTTGGTACCATGTGGGATGTGCTCAAAGCACAGCCTATCATCCAGCCAAAGGAAGCCAAGCA ACCTGTCTCTATAACTCGCAAACTCAAGCCATTCCAACTAGAGGGCTTGAACTGGATGATAGCTCAGGAAAAGAC TGAATACAGGGGTGGTTTGTTGGGCGATGAGATGGGCATGGGAAAGACTATTCAAGCAGTTTCACTCATCATGTC CGATTTCCCCCAGTCTGACCCGACCCTCGTTCTCGTCCCACCGGTCGCTTTGATGCAGTGGGTATCCGAGATCAA GGAATACACGGATGGCAAGCTGAAGGTCTTGGTCTACCACAACTCGGACGCGAAAATCAAAAAGTTGACGCCGGC TGAGATTCGTAAGTACGATGTCATCATGATTTCCTACGCAAGTCTCGAATCCATTTACCGCAAGCAGGAGAAAGG CTTCTCTCGCGGTGCAACGATGGTCAAAGCAGACAGTGTCATCCACGCAGTCCACTATCACCGCCTCATCCTTGA CGAGGCGCATAGTATCAAATCACGTACCACGGGTGTTGCTAGGGCATGTTTTGCCTTGGAGGCCAATTACAAGTG GTGCCTATCGGGCACACCCGTACAGAACCGGATTGGAGAATTCTTCTCCCTTCTGCGATTTCTACAAGTCAAGCC ATTTGCATGCTACTTTTGTAAGCAGTGCGATTGCGAACAACTCCAGTGGACCTCGACTAAAGAGGGGCGTTGTAC TGAGTGCTCTCACACTGGGTTTATGCATATTTCGATCTTCAACAAGGAGATTCTTAACCCAATTATTGAAGGGAA AACTCAGCGGCAACGTAAAGAGGGTCTCGAAAAGCTCCGTCTCATCACCGATCATATCATGCTTCGCCGGATGAA GCAACAGCATACAACGTCGATGGAGCTCCCACCTAAACGTATCATGTTACACAATGAATTTTTCGGTGAGATCGA ACAAGATTTCTCACGCAGCATTATGACGAACTCGACAAGAAAATTCGACACCTATGTCAGCGAGGGTGTCATGTT GAATAACTATGCCAACATCTTCGGGTTGATCATGCAGATGCGCCAAGTTGCAAACCATCCCGATCTCATTCTGAA GAAAAAAGCGCAATTAGGGTTCAACGTTGCTGTATGCTGTATCTGTGACGAGCCCGCAGAAGATGGCATTCGGTC TCAGTGCCGTCATGAATTCTGTCGTCAATGTGCCAAGGACTACATTCAGTCATTCCAGGACGATAGCAAGCATGT TGACTGCCCACGGTGCCATATTGCCCTTTCCATCGATTTGGAACAACCTACCCTTGCCGAATACGAAGAGTCTGT CAAGAAGAATTCCATCATCAACCGCATCTCCATGGAGAGCTGGACCTCTTCCACCAAAATCGAGATGCTCCTTTA TGAACTTTTCAAGGAGCGAAGCAAAAGTCACACCCCTAAATCTATCATCTTCTCCCAGTTCACATCCATGCTACA ACTGGTGGAATGGCGGCTACGCCATGCCGGATTCAACACCGTGATGCTGGATGGATCGATGACCCCAGCACAGCG GCAAAAGTCCATTGAACATTTCATGACTAAACCCGAGGTTGAGGTTTTCTTAGTCTCTCTCAAGGCCGGTGGCGT GGCACTTAACCTCACGGAAGCCTCCCGAGTTTTTATTATCGACCCATGGTGGAATCCCGCGGCAGAATGGCAAAG CGCCGATCGCAGTCACCGAATTGGCCAGCAGCGGCCTTGTGTGGTCACTCGTCTCTGTATCGAGGACTCTGTCGA GTCCCGAATCATTCAACTTCAAGAGAAGAAGGCCAACCTCATCCGGGGTACCCTGAATAAAGATCAAGCGGCGGC ATTGGAAAAACTGACCCCGGAGGACATGCAATTCCTCTTCCGAGGAACTTAG |