Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8469.t1
Gene name
Locationscaffold_33:153540..156153
Strand-
Gene length (bp)2613
Transcript length (bp)2007
Coding sequence length (bp)2007
Protein length (aa) 669

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04146 YTH YT521-B-like domain 7.1E-61 467 656
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.3E-06 324 386

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 33.27 19.67 46.87
5d_25C Five days - 25 degrees Celsius 31.06 18.20 43.92
7d_25C Seven days - 25 degrees Celsius 33.88 19.96 47.80
10d_25C Ten days - 25 degrees Celsius 69.94 42.65 97.23
7d_15C Seven days - 15 degrees Celsius 12.39 6.05 18.73
7d_30C Seven days - 30 degrees Celsius 102.38 61.75 143.02

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.834345 no
3d_25C 7d_25C 0.961507 no
3d_25C 7d_15C 0.000700 yes
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.000700 yes
5d_25C 7d_25C 0.776759 no
5d_25C 7d_15C 0.000700 yes
5d_25C 7d_30C 0.000700 yes
5d_25C 10d_25C 0.000700 yes
7d_25C 7d_15C 0.000700 yes
7d_25C 7d_30C 0.000700 yes
7d_25C 10d_25C 0.000700 yes
7d_15C 7d_30C 0.000700 yes
7d_15C 10d_25C 0.000700 yes
7d_30C 10d_25C 0.082307 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8469.t1
MYLNSVLFPGMPSTSSPSSGMCWLSVSLKLPLSLVPSPLSTVAYLESLYMWKSYLRRWDFYKNSYTAVTSGLRDL
VFRRLQLKVSSTAPWAMFLQTRQLTRQPRYQNRVHLLLQRHVPMSHIIPASQKLGHHPQGYNPQSMHQYTAHGQG
MMYPMPMTPYGHNSGGMPYGMSYPAYPPYAIPQHPGPQPQHHYPPHGTQMQNMPNLNPGQVSPYSSGYYPHSSYG
PYGHGVPAGQMPQAISPVRTNTSSPSKPVTLRKEADKRMTDLEYDVSKTIVDGSNPKKIAQSQPQPPFSNNTPPS
QPLPTAPSTPRGPPRKPKQSGHALWVGNLPPGASVIDLKDHFSQDAKNDIESVFLISKSNCAFVNYKSAAACVAA
LARFHDSRFQGVRVVCRLRKGLTAPGSGSAAPNNALRPRPEDNATATTTITTATTTATTTATDPGEDHSITPEPG
SAAPATGNHPPPARLVDRYFIVKSLTVEDLELSKQSGIWATQSHNEAAMNQAFENTDYVYLIFSANKSGEYFGYA
RMMSPISDDEELALEMPSRPDPPPGGPDELDVTLTAATSTAPQGRIIDDSVRGTIFWEVESSEDENDNASEKSVE
PEDPEEGQTFGKPFRIQWISTERVPFQRTRGLRNPWNANREIKIARDGTEIEPTIGLPAVIKSFFDGL*
Coding >Pro_DTO377G3_2|g8469.t1
ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA
GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG
TGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGCGGTGACATCCGGGCTACGTGACTTA
GTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAGACAGCTGACG
AGACAGCCCCGATATCAGAACAGGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCT
TCGCAGAAGCTCGGCCATCATCCACAAGGCTATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGC
ATGATGTACCCCATGCCAATGACTCCGTATGGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCT
TATCCGCCGTATGCCATCCCTCAACACCCTGGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATG
CAAAACATGCCAAACCTCAATCCCGGGCAAGTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGC
CCTTATGGACATGGAGTGCCTGCCGGCCAAATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCC
TCGAAACCGGTCACCTTGCGCAAAGAAGCCGATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATC
GTGGATGGATCGAACCCCAAAAAAATAGCGCAGTCCCAACCACAACCGCCGTTCTCCAACAATACTCCCCCTTCG
CAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAAAGCCCAAGCAATCTGGCCACGCGCTGTGG
GTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATCACTTCTCGCAAGATGCAAAAAACGACATT
GAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATTACAAGTCGGCTGCCGCCTGCGTTGCAGCT
TTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCTGCCGACTGCGAAAGGGGCTCACTGCTCCG
GGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGGAGGATAATGCTACGGCTACGACTACGATT
ACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCGAGGACCATTCAATCACACCGGAGCCCGGT
TCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGGTAGATCGGTACTTTATTGTTAAGAGCTTG
ACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTACACAGTCGCACAACGAGGCGGCAATGAAT
CAGGCTTTCGAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGATACGCC
CGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCGCCCGGC
GGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGATGATTCA
GTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGCGTCGAG
CCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGAGTACCT
TTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGTACCGAA
ATTGAGCCAACGATCGGGCTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA
Transcript >Pro_DTO377G3_2|g8469.t1
ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA
GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG
TGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGCGGTGACATCCGGGCTACGTGACTTA
GTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAGACAGCTGACG
AGACAGCCCCGATATCAGAACAGGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCT
TCGCAGAAGCTCGGCCATCATCCACAAGGCTATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGC
ATGATGTACCCCATGCCAATGACTCCGTATGGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCT
TATCCGCCGTATGCCATCCCTCAACACCCTGGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATG
CAAAACATGCCAAACCTCAATCCCGGGCAAGTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGC
CCTTATGGACATGGAGTGCCTGCCGGCCAAATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCC
TCGAAACCGGTCACCTTGCGCAAAGAAGCCGATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATC
GTGGATGGATCGAACCCCAAAAAAATAGCGCAGTCCCAACCACAACCGCCGTTCTCCAACAATACTCCCCCTTCG
CAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAAAGCCCAAGCAATCTGGCCACGCGCTGTGG
GTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATCACTTCTCGCAAGATGCAAAAAACGACATT
GAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATTACAAGTCGGCTGCCGCCTGCGTTGCAGCT
TTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCTGCCGACTGCGAAAGGGGCTCACTGCTCCG
GGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGGAGGATAATGCTACGGCTACGACTACGATT
ACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCGAGGACCATTCAATCACACCGGAGCCCGGT
TCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGGTAGATCGGTACTTTATTGTTAAGAGCTTG
ACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTACACAGTCGCACAACGAGGCGGCAATGAAT
CAGGCTTTCGAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGATACGCC
CGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCGCCCGGC
GGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGATGATTCA
GTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGCGTCGAG
CCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGAGTACCT
TTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGTACCGAA
ATTGAGCCAACGATCGGGCTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA
Gene >Pro_DTO377G3_2|g8469.t1
ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA
GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG
TGTTTGTCCTACTTTGTTTTGTGAGCTTCGGCTTATGGCCTAACAGGAGGGGGGTCAGTCCGTGTTGACCGGTTT
TCTTCCCCTTTCAATTTCTTACCATCACACACACATTCTATCCTTGATATTTTCTTCACAAAATCCGGAGAACTA
ACTTGCATGGCTTGGGCCTTTTCCTTCCCGGATTAGATCTTTGCACTTCCCCTCTTCTACGGTGTTCTGTTCTGT
TCTGTTCTATTCTACCGGACTCTTAGGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGC
GGTGACATCCGGGCTACGTGACTTAGGTAAGGAAAAGGTCTCGAGTAAGATGTGTCCATTCCCTACAGACACTAA
AGACCCAGTAGTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAG
ACAGCTGACGAGACAGCCCCGATATCAGAACAGGGTTAGCCCTTCCTTTTCAAATGCCGTCCAAGCTTTGCCTGA
CTAAATCTCTTCTCAGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCTTCGCAGAA
GCTCGGTATGGAACCGCCCCCTCTCCCTTAAATATGGTCATGGGATACAACTTCCCAGGCCATCATCCACAAGGC
TATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGCATGATGTACCCCATGCCAATGACTCCGTAT
GGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCTTATCCGCCGTATGCCATCCCTCAACACCCT
GGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATGCAAAACATGCCAAACCTCAATCCCGGGCAA
GTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGCCCTTATGGACATGGAGTGCCTGCCGGCCAA
ATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCCTCGAAACCGGTCACCTTGCGCAAAGAAGCC
GATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATCGTGGATGGATCGAACCCCAAAAAAATAGCG
CAGTCCCAACCACAACCGCCGTTCTCCAGTGAGCTCTTGTCGAATCCCCTCACTTTGCAACTGTTACTAACCTGC
ATTCATCTAAAGACAATACTCCCCCTTCGCAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAA
AGCCCAAGCAATCTGGCCACGCGCTGTGGGTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATC
ACTTCTCGCAAGATGCAAAAAACGACATTGAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATT
ACAAGTCGGCTGCCGCCTGCGTTGCAGCTTTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCT
GCCGACTGCGAAAGGGGCTCACTGCTCCGGGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGG
AGGATAATGCTACGGCTACGACTACGATTACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCG
AGGACCATTCAATCACACCGGAGCCCGGTTCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGG
TAGATCGGTACTTTATTGTTAAGAGCTTGACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTA
CACAGTCGCACAACGAGGCGGCAATGAATCAGGCTTTCGAGGTGAGTCCAAAGCTATGTAGCCCAGCAATGACCG
AAACTGACCTTTACCCAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGA
TACGCCCGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCG
CCCGGCGGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGAT
GATTCAGTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGC
GTCGAGCCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGA
GTACCTTTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGT
ACCGAAATTGAGCCAACGATCGGGCGTAAGCTGATTCAGTTGTTTCATTTGCCTTGAGTTCCTGATTTCTTATCA
TGTGGATGATCTCCTCTGTCTTTAGTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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