Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Pro_DTO377G3_2|g8469.t1
Gene name
Location	scaffold_33:153540..156153
Strand	-
Gene length (bp)	2613
Transcript length (bp)	2007
Coding sequence length (bp)	2007
Protein length (aa)	669

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04146	YTH	YT521-B-like domain	3.4E-57	467	656
PF00076	RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.3E-06	324	386

GO

GO Term	Description	Terminal node
GO:0003723	RNA binding	Yes
GO:0003676	nucleic acid binding	Yes
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g8469.t1 MYLNSVLFPGMPSTSSPSSGMCWLSVSLKLPLSLVPSPLSTVAYLESLYMWKSYLRRWDFYKNSYTAVTSGLRDL VFRRLQLKVSSTAPWAMFLQTRQLTRQPRYQNRVHLLLQRHVPMSHIIPASQKLGHHPQGYNPQSMHQYTAHGQG MMYPMPMTPYGHNSGGMPYGMSYPAYPPYAIPQHPGPQPQHHYPPHGTQMQNMPNLNPGQVSPYSSGYYPHSSYG PYGHGVPAGQMPQAISPVRTNTSSPSKPVTLRKEADKRMTDLEYDVSKTIVDGSNPKKIAQSQPQPPFSNNTPPS QPLPTAPSTPRGPPRKPKQSGHALWVGNLPPGASVIDLKDHFSQDAKNDIESVFLISKSNCAFVNYKSAAACVAA LARFHDSRFQGVRVVCRLRKGLTAPGSGSAAPNNALRPRPEDNATATTTITTATTTATTTATDPGEDHSITPEPG SAAPATGNHPPPARLVDRYFIVKSLTVEDLELSKQSGIWATQSHNEAAMNQAFENTDYVYLIFSANKSGEYFGYA RMMSPISDDEELALEMPSRPDPPPGGPDELDVTLTAATSTAPQGRIIDDSVRGTIFWEVESSEDENDNASEKSVE PEDPEEGQTFGKPFRIQWISTERVPFQRTRGLRNPWNANREIKIARDGTEIEPTIGLPAVIKSFFDGL*
Coding	>Pro_DTO377G3_2|g8469.t1 ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG TGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGCGGTGACATCCGGGCTACGTGACTTA GTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAGACAGCTGACG AGACAGCCCCGATATCAGAACAGGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCT TCGCAGAAGCTCGGCCATCATCCACAAGGCTATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGC ATGATGTACCCCATGCCAATGACTCCGTATGGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCT TATCCGCCGTATGCCATCCCTCAACACCCTGGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATG CAAAACATGCCAAACCTCAATCCCGGGCAAGTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGC CCTTATGGACATGGAGTGCCTGCCGGCCAAATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCC TCGAAACCGGTCACCTTGCGCAAAGAAGCCGATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATC GTGGATGGATCGAACCCCAAAAAAATAGCGCAGTCCCAACCACAACCGCCGTTCTCCAACAATACTCCCCCTTCG CAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAAAGCCCAAGCAATCTGGCCACGCGCTGTGG GTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATCACTTCTCGCAAGATGCAAAAAACGACATT GAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATTACAAGTCGGCTGCCGCCTGCGTTGCAGCT TTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCTGCCGACTGCGAAAGGGGCTCACTGCTCCG GGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGGAGGATAATGCTACGGCTACGACTACGATT ACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCGAGGACCATTCAATCACACCGGAGCCCGGT TCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGGTAGATCGGTACTTTATTGTTAAGAGCTTG ACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTACACAGTCGCACAACGAGGCGGCAATGAAT CAGGCTTTCGAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGATACGCC CGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCGCCCGGC GGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGATGATTCA GTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGCGTCGAG CCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGAGTACCT TTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGTACCGAA ATTGAGCCAACGATCGGGCTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA
Transcript	>Pro_DTO377G3_2|g8469.t1 ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG TGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGCGGTGACATCCGGGCTACGTGACTTA GTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAGACAGCTGACG AGACAGCCCCGATATCAGAACAGGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCT TCGCAGAAGCTCGGCCATCATCCACAAGGCTATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGC ATGATGTACCCCATGCCAATGACTCCGTATGGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCT TATCCGCCGTATGCCATCCCTCAACACCCTGGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATG CAAAACATGCCAAACCTCAATCCCGGGCAAGTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGC CCTTATGGACATGGAGTGCCTGCCGGCCAAATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCC TCGAAACCGGTCACCTTGCGCAAAGAAGCCGATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATC GTGGATGGATCGAACCCCAAAAAAATAGCGCAGTCCCAACCACAACCGCCGTTCTCCAACAATACTCCCCCTTCG CAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAAAGCCCAAGCAATCTGGCCACGCGCTGTGG GTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATCACTTCTCGCAAGATGCAAAAAACGACATT GAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATTACAAGTCGGCTGCCGCCTGCGTTGCAGCT TTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCTGCCGACTGCGAAAGGGGCTCACTGCTCCG GGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGGAGGATAATGCTACGGCTACGACTACGATT ACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCGAGGACCATTCAATCACACCGGAGCCCGGT TCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGGTAGATCGGTACTTTATTGTTAAGAGCTTG ACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTACACAGTCGCACAACGAGGCGGCAATGAAT CAGGCTTTCGAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGATACGCC CGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCGCCCGGC GGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGATGATTCA GTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGCGTCGAG CCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGAGTACCT TTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGTACCGAA ATTGAGCCAACGATCGGGCTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA
Gene	>Pro_DTO377G3_2|g8469.t1 ATGTACCTGAATTCAGTACTCTTCCCTGGCATGCCTAGCACTTCTTCCCCCTCCTCTGGCATGTGTTGGCTGTCA GTTAGCCTTAAGCTTCCCCTGTCTCTGGTACCTAGCCCACTGTCCACCGTGGCTTATCTAGAATCCCTTTATATG TGTTTGTCCTACTTTGTTTTGTGAGCTTCGGCTTATGGCCTAACAGGAGGGGGGTCAGTCCGTGTTGACCGGTTT TCTTCCCCTTTCAATTTCTTACCATCACACACACATTCTATCCTTGATATTTTCTTCACAAAATCCGGAGAACTA ACTTGCATGGCTTGGGCCTTTTCCTTCCCGGATTAGATCTTTGCACTTCCCCTCTTCTACGGTGTTCTGTTCTGT TCTGTTCTATTCTACCGGACTCTTAGGGAAGTCTTACTTGCGTCGGTGGGATTTCTATAAGAATTCCTACACCGC GGTGACATCCGGGCTACGTGACTTAGGTAAGGAAAAGGTCTCGAGTAAGATGTGTCCATTCCCTACAGACACTAA AGACCCAGTAGTTTTCAGAAGGTTACAATTGAAAGTTTCATCAACGGCCCCATGGGCAATGTTCCTTCAGACAAG ACAGCTGACGAGACAGCCCCGATATCAGAACAGGGTTAGCCCTTCCTTTTCAAATGCCGTCCAAGCTTTGCCTGA CTAAATCTCTTCTCAGGTGCATCTCCTACTTCAGCGCCACGTCCCAATGTCACACATCATTCCAGCTTCGCAGAA GCTCGGTATGGAACCGCCCCCTCTCCCTTAAATATGGTCATGGGATACAACTTCCCAGGCCATCATCCACAAGGC TATAATCCGCAGTCAATGCATCAGTACACAGCCCACGGGCAAGGCATGATGTACCCCATGCCAATGACTCCGTAT GGACACAACTCCGGAGGCATGCCGTATGGCATGTCTTACCCTGCTTATCCGCCGTATGCCATCCCTCAACACCCT GGCCCTCAACCTCAACATCATTACCCGCCTCATGGAACCCAAATGCAAAACATGCCAAACCTCAATCCCGGGCAA GTATCTCCGTATAGCTCGGGCTATTACCCTCATTCATCATACGGCCCTTATGGACATGGAGTGCCTGCCGGCCAA ATGCCTCAGGCTATATCTCCAGTACGTACTAACACCAGTTCACCCTCGAAACCGGTCACCTTGCGCAAAGAAGCC GATAAACGAATGACGGATCTGGAGTACGACGTTTCAAAGACCATCGTGGATGGATCGAACCCCAAAAAAATAGCG CAGTCCCAACCACAACCGCCGTTCTCCAGTGAGCTCTTGTCGAATCCCCTCACTTTGCAACTGTTACTAACCTGC ATTCATCTAAAGACAATACTCCCCCTTCGCAACCACTCCCGACCGCTCCGAGTACCCCACGAGGACCACCCCGAA AGCCCAAGCAATCTGGCCACGCGCTGTGGGTTGGAAATCTTCCTCCCGGAGCCAGTGTCATTGATCTCAAAGATC ACTTCTCGCAAGATGCAAAAAACGACATTGAGAGCGTGTTCCTGATCTCCAAGAGTAATTGTGCGTTTGTGAATT ACAAGTCGGCTGCCGCCTGCGTTGCAGCTTTGGCGAGATTTCACGACTCCCGATTTCAGGGCGTCCGCGTTGTCT GCCGACTGCGAAAGGGGCTCACTGCTCCGGGCTCCGGGTCTGCAGCTCCGAATAATGCTCTCCGACCACGTCCGG AGGATAATGCTACGGCTACGACTACGATTACGACAGCTACGACTACTGCTACGACTACTGCTACGGACCCGGGCG AGGACCATTCAATCACACCGGAGCCCGGTTCCGCAGCGCCTGCTACGGGGAACCATCCTCCCCCGGCCCGGCTGG TAGATCGGTACTTTATTGTTAAGAGCTTGACAGTGGAGGATCTCGAGTTGAGCAAGCAAAGTGGCATTTGGGCTA CACAGTCGCACAACGAGGCGGCAATGAATCAGGCTTTCGAGGTGAGTCCAAAGCTATGTAGCCCAGCAATGACCG AAACTGACCTTTACCCAGAACACAGATTACGTTTATTTAATTTTCTCCGCCAACAAATCTGGCGAATATTTTGGA TACGCCCGTATGATGTCGCCGATCAGCGACGACGAAGAACTGGCCTTGGAGATGCCATCTCGGCCCGATCCCCCG CCCGGCGGGCCCGACGAACTTGACGTGACCCTGACAGCGGCAACTTCGACAGCGCCCCAAGGACGAATCATCGAT GATTCAGTGCGGGGTACTATCTTCTGGGAGGTCGAGTCATCGGAAGATGAGAACGACAATGCGAGCGAGAAAAGC GTCGAGCCCGAGGATCCAGAAGAGGGTCAAACCTTTGGCAAACCGTTCCGCATTCAATGGATTTCGACAGAGCGA GTACCTTTCCAGCGCACTCGAGGCCTTCGTAACCCTTGGAATGCGAATCGGGAAATCAAAATCGCTCGTGACGGT ACCGAAATTGAGCCAACGATCGGGCGTAAGCTGATTCAGTTGTTTCATTTGCCTTGAGTTCCTGATTTCTTATCA TGTGGATGATCTCCTCTGTCTTTAGTTCCTGCGGTTATCAAGAGCTTCTTTGATGGTCTATGA