© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8443.t1 |
| Gene name | |
| Location | scaffold_32:243706..244915 |
| Strand | - |
| Gene length (bp) | 1209 |
| Transcript length (bp) | 1104 |
| Coding sequence length (bp) | 1104 |
| Protein length (aa) | 368 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 1.5E-05 | 223 | 352 |
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 1.1E-04 | 70 | 126 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0048037 | cofactor binding | No |
| GO:0050662 | coenzyme binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8443.t1 MLEGKNLINWSSTSTVLGNLLDYNPTRRLDLRDEHICEKLETEVVNGVPRVTSAIVKNLTKPRTPEDPEDKIRIK AKYVVVCAGPILTPQLLYKSGFIPEDKDEHRPDLSNEHMYLPALGRNLTEQTMCFCQIVLKDDWVKELQGSKWDE QCAEHRKKFDKDADPLQIPFDDLDPQITLPVGPEHEWHTQIHRDAFSYGAVPPAIDTRTIVDLRFFGQAKPNWDN RVKFSQKLTGAYGMPQPTFVYKPDEQDRMDSHRMMKDMEEVAGVLGGYLPGSEPQFLSPGLALHVCGTTKSQKRD PKKEDSQQKEFSCCDEHSKIWGIENLYVGGLNVISGPNASNPTLTAMCHAIKGAEAIRHKLKRKQKA* |
| Coding | >Pro_DTO377G3_2|g8443.t1 ATGCTGGAAGGGAAAAACTTGATAAATTGGTCATCTACCTCCACGGTATTGGGTAACCTGTTGGATTACAATCCA ACTCGTCGGCTCGATCTGCGGGACGAGCACATTTGCGAAAAACTCGAAACTGAGGTCGTGAATGGCGTCCCAAGA GTTACCTCCGCTATTGTCAAGAATCTTACTAAGCCTCGAACACCGGAGGACCCTGAGGATAAAATCAGGATCAAA GCCAAGTACGTGGTTGTTTGCGCCGGGCCAATTCTCACGCCGCAGCTCCTTTACAAATCGGGATTTATCCCGGAA GACAAGGATGAGCACCGGCCGGATTTGTCGAATGAACACATGTATCTTCCAGCATTGGGACGGAATCTGACCGAG CAGACAATGTGCTTTTGTCAAATAGTCCTGAAAGACGACTGGGTCAAGGAGCTTCAGGGATCCAAATGGGATGAA CAGTGCGCTGAACACAGAAAGAAGTTTGACAAAGACGCCGACCCTCTGCAAATTCCATTCGACGACCTAGATCCT CAAATCACGCTGCCTGTCGGCCCTGAGCACGAATGGCATACGCAGATTCATCGGGACGCGTTTTCCTATGGTGCA GTTCCGCCTGCAATTGATACACGCACCATCGTTGATCTCCGATTTTTTGGCCAGGCCAAGCCGAACTGGGACAAT CGAGTCAAGTTCTCGCAGAAGCTCACAGGCGCATATGGCATGCCCCAGCCCACATTCGTTTACAAGCCCGATGAA CAAGACCGCATGGACAGCCATAGGATGATGAAGGACATGGAAGAGGTAGCAGGTGTATTGGGAGGATATCTTCCG GGCTCAGAACCACAATTCCTTTCTCCCGGCTTAGCTCTTCATGTTTGCGGTACGACCAAGTCTCAAAAGAGAGAT CCGAAGAAGGAAGACTCCCAACAAAAAGAATTTTCGTGTTGTGATGAGCATTCTAAGATATGGGGAATCGAAAAC CTTTACGTTGGCGGTCTCAACGTTATCTCGGGCCCCAATGCATCGAATCCAACTTTGACAGCGATGTGTCATGCA ATCAAGGGAGCAGAAGCCATACGCCACAAGCTTAAGCGAAAGCAGAAGGCCTAG |
| Transcript | >Pro_DTO377G3_2|g8443.t1 ATGCTGGAAGGGAAAAACTTGATAAATTGGTCATCTACCTCCACGGTATTGGGTAACCTGTTGGATTACAATCCA ACTCGTCGGCTCGATCTGCGGGACGAGCACATTTGCGAAAAACTCGAAACTGAGGTCGTGAATGGCGTCCCAAGA GTTACCTCCGCTATTGTCAAGAATCTTACTAAGCCTCGAACACCGGAGGACCCTGAGGATAAAATCAGGATCAAA GCCAAGTACGTGGTTGTTTGCGCCGGGCCAATTCTCACGCCGCAGCTCCTTTACAAATCGGGATTTATCCCGGAA GACAAGGATGAGCACCGGCCGGATTTGTCGAATGAACACATGTATCTTCCAGCATTGGGACGGAATCTGACCGAG CAGACAATGTGCTTTTGTCAAATAGTCCTGAAAGACGACTGGGTCAAGGAGCTTCAGGGATCCAAATGGGATGAA CAGTGCGCTGAACACAGAAAGAAGTTTGACAAAGACGCCGACCCTCTGCAAATTCCATTCGACGACCTAGATCCT CAAATCACGCTGCCTGTCGGCCCTGAGCACGAATGGCATACGCAGATTCATCGGGACGCGTTTTCCTATGGTGCA GTTCCGCCTGCAATTGATACACGCACCATCGTTGATCTCCGATTTTTTGGCCAGGCCAAGCCGAACTGGGACAAT CGAGTCAAGTTCTCGCAGAAGCTCACAGGCGCATATGGCATGCCCCAGCCCACATTCGTTTACAAGCCCGATGAA CAAGACCGCATGGACAGCCATAGGATGATGAAGGACATGGAAGAGGTAGCAGGTGTATTGGGAGGATATCTTCCG GGCTCAGAACCACAATTCCTTTCTCCCGGCTTAGCTCTTCATGTTTGCGGTACGACCAAGTCTCAAAAGAGAGAT CCGAAGAAGGAAGACTCCCAACAAAAAGAATTTTCGTGTTGTGATGAGCATTCTAAGATATGGGGAATCGAAAAC CTTTACGTTGGCGGTCTCAACGTTATCTCGGGCCCCAATGCATCGAATCCAACTTTGACAGCGATGTGTCATGCA ATCAAGGGAGCAGAAGCCATACGCCACAAGCTTAAGCGAAAGCAGAAGGCCTAG |
| Gene | >Pro_DTO377G3_2|g8443.t1 ATGCGTTTGGAAAACGAGATGTCAAACCTCTACCACTTGCCGCGAAGAAAGTGGAAGGGAAAAACTTGATAAATT GGTCATCTACCTCCACGGTATTGGGTAACCTGTTGGATTACAATCCAACTCGTCGGCTCGATCTGCGGGACGAGC ACATTTGCGAAAAACTCGAAACTGAGGTCGTGAATGGCGTCCCAAGAGTTACCTCCGCTATTGTCAAGAATCTTA CTAAGCCTCGAACACCGGAGGACCCTGAGGATAAAATCAGGATCAAAGCCAAGTACGTGGTTGTTTGCGCCGGGC CAATTCTCACGCCGCAGCTCCTTTACAAATCGGGATTTATCCCGGAAGACAAGGATGAGCACCGGCCGGATTTGT CGAATGAACACATGTATCTTCCAGCATTGGTATCGCATGGGCCGTGCACCACATCTGAACGGAATGACTCACTGA CGCACTCTACAGGGACGGAATCTGACCGAGCAGACAATGTGCTTTTGTCAAATAGTCCTGAAAGACGACTGGGTC AAGGAGCTTCAGGGATCCAAATGGGATGAACAGTGCGCTGAACACAGAAAGAAGTTTGACAAAGACGCCGACCCT CTGCAAATTCCATTCGACGACCTAGATCCTCAAATCACGCTGCCTGTCGGCCCTGAGCACGAATGGCATACGCAG ATTCATCGGGACGCGTTTTCCTATGGTGCAGTTCCGCCTGCAATTGATACACGCACCATCGTTGATCTCCGATTT TTTGGCCAGGCCAAGCCGAACTGGGACAATCGAGTCAAGTTCTCGCAGAAGCTCACAGGCGCATATGGCATGCCC CAGCCCACATTCGTTTACAAGCCCGATGAACAAGACCGCATGGACAGCCATAGGATGATGAAGGACATGGAAGAG GTAGCAGGTGTATTGGGAGGATATCTTCCGGGCTCAGAACCACAATTCCTTTCTCCCGGCTTAGCTCTTCATGTT TGCGGTACGACCAAGTCTCAAAAGAGAGATCCGAAGAAGGAAGACTCCCAACAAAAAGAATTTTCGTGTTGTGAT GAGCATTCTAAGATATGGGGAATCGAAAACCTTTACGTTGGCGGTCTCAACGTTATCTCGGGCCCCAATGCATCG AATCCAACTTTGACAGCGATGTGTCATGCAATCAAGGGAGCAGAAGCCATACGCCACAAGCTTAAGCGAAAGCAG AAGGCCTAG |