Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g843.t1
Gene name
Locationscaffold_01:2253815..2255068
Strand+
Gene length (bp)1253
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 8.6E-31 54 262

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

Domain # Start End Length
1 64 83 19
2 93 115 22
3 122 144 22
4 164 186 22
5 191 213 22
6 228 250 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g843.t1
MDSFASQNGESKATFQNRENTQNALTTVPTSVTLSAEQFERLYLSPMTVRQSSLAKKVGNPTPLALGGFVITTTP
VSCCLMGWRGASGNGVAFIGPIIFLGGLLLLITSILEFIIGNTFPCVVFGTIGGFWFAFAATMIPAFNAAAPYSS
STTDTAAGLASESFMNTYAFLFITMAVLMFIFMICATRINVVYTLIFLSLLMVFLLLSAAYWQLGQGNASVGDRC
VKGAGASLFVASLLGFYLLIVQLFGSIGFPCVLPVGDLAVLWTRNEDKEREDVEQPNAR*
Coding >Pro_DTO377G3_2|g843.t1
ATGGACAGCTTCGCCAGTCAAAATGGCGAGTCGAAGGCCACTTTCCAAAACAGGGAGAACACACAAAATGCTCTC
ACTACAGTCCCAACGTCAGTGACTCTGTCAGCGGAACAATTTGAAAGGCTTTATTTGAGTCCTATGACGGTTCGC
CAATCATCGCTAGCGAAGAAGGTTGGAAATCCGACACCATTAGCACTAGGAGGTTTTGTCATTACCACCACACCC
GTTTCATGCTGCTTGATGGGCTGGAGAGGAGCCAGTGGAAATGGAGTTGCTTTCATTGGACCTATCATTTTCCTT
GGTGGTCTGTTGTTGCTTATTACGAGTATTCTTGAGTTCATCATCGGAAATACATTCCCCTGTGTTGTGTTTGGC
ACTATTGGCGGGTTTTGGTTTGCGTTTGCAGCCACGATGATTCCAGCTTTCAATGCAGCCGCTCCCTACTCCTCG
TCAACCACCGATACAGCTGCCGGGCTAGCCAGCGAAAGCTTTATGAATACCTATGCATTCCTATTCATAACTATG
GCCGTTTTGATGTTCATCTTCATGATTTGTGCAACACGTATCAATGTGGTATACACTCTCATTTTCCTCTCACTG
CTCATGGTTTTCCTTCTGCTGTCCGCGGCCTATTGGCAACTAGGCCAAGGGAATGCATCTGTTGGTGATCGGTGT
GTAAAAGGTGCTGGAGCTTCGCTCTTTGTTGCTAGTTTACTCGGCTTTTACCTGTTGATTGTTCAACTGTTTGGG
TCCATAGGGTTCCCATGCGTTTTGCCGGTTGGAGACTTGGCAGTACTTTGGACCCGCAATGAAGACAAAGAGCGA
GAGGATGTTGAACAGCCAAACGCTCGCTAG
Transcript >Pro_DTO377G3_2|g843.t1
ATGGACAGCTTCGCCAGTCAAAATGGCGAGTCGAAGGCCACTTTCCAAAACAGGGAGAACACACAAAATGCTCTC
ACTACAGTCCCAACGTCAGTGACTCTGTCAGCGGAACAATTTGAAAGGCTTTATTTGAGTCCTATGACGGTTCGC
CAATCATCGCTAGCGAAGAAGGTTGGAAATCCGACACCATTAGCACTAGGAGGTTTTGTCATTACCACCACACCC
GTTTCATGCTGCTTGATGGGCTGGAGAGGAGCCAGTGGAAATGGAGTTGCTTTCATTGGACCTATCATTTTCCTT
GGTGGTCTGTTGTTGCTTATTACGAGTATTCTTGAGTTCATCATCGGAAATACATTCCCCTGTGTTGTGTTTGGC
ACTATTGGCGGGTTTTGGTTTGCGTTTGCAGCCACGATGATTCCAGCTTTCAATGCAGCCGCTCCCTACTCCTCG
TCAACCACCGATACAGCTGCCGGGCTAGCCAGCGAAAGCTTTATGAATACCTATGCATTCCTATTCATAACTATG
GCCGTTTTGATGTTCATCTTCATGATTTGTGCAACACGTATCAATGTGGTATACACTCTCATTTTCCTCTCACTG
CTCATGGTTTTCCTTCTGCTGTCCGCGGCCTATTGGCAACTAGGCCAAGGGAATGCATCTGTTGGTGATCGGTGT
GTAAAAGGTGCTGGAGCTTCGCTCTTTGTTGCTAGTTTACTCGGCTTTTACCTGTTGATTGTTCAACTGTTTGGG
TCCATAGGGTTCCCATGCGTTTTGCCGGTTGGAGACTTGGCAGTACTTTGGACCCGCAATGAAGACAAAGAGCGA
GAGGATGTTGAACAGCCAAACGCTCGCTAG
Gene >Pro_DTO377G3_2|g843.t1
ATGGACAGCTTCGCCAGTCAAAATGGCGAGTCGAAGGCCACTTTCCAAAACAGGGAGAACACACAAAATGCTCTC
ACTACAGTCCCAACGTCAGTGACTCTGTCAGCGGAACAATTTGAAAGGCTTTATTTGAGTCCTATGACGGTTCGC
CAATCATCGCTAGCGAAGAAGGTTGGAAATCCGACACCATTGTGAGTCTCTGAATACTATATTCTACGCACGGCA
ATTTTGTCTGACTTGATTGAACATGCAGAGCACTAGGAGGTTTTGTCATTACCACCACACCCGTTTCATGCTGCT
TGATGGGCTGGAGAGGAGCCAGTGGAAATGGAGTTGCTTTCATGTGAGAAAACCAATGGATCGAGAGAGCCCCAT
CTAATGAACTGAACAGTGGACCTATCATTTTCCTTGGTGGTCTGTTGTTGCTTATTACGAGTATTCTTGAGTTCA
TCATCGGAAATACATTCCCCTGTGTTGTGTTTGGCACTATTGGTAAGTCTTCCTATCTCATGATACAAGCCTCGC
TCACTAGTCCATGTTGCTGATACTTCACCAAGGCGGGTTTTGGTTTGCGTTTGCAGCCACGATGATTCCAGCTTT
CAATGCAGCCGGTCAGTTTGTTCAGATATATCATTCTACCCTCATGATATGAGTTTGCTCACACTTCATAGCTCC
CTACTCCTCGTCAACCACCGATACAGCTGCCGGGCTAGCCAGCGAAAGCTTTATGAATACCTATGGTAAGGGCAA
CCAAGACTCTCAAATTTGAGGAATAGCTCTGACGAAACCAGCATTCCTATTCATAACTATGGCCGTTTTGATGTT
CATCTTCATGATTTGTGCAACACGTATCAATGTGGTATACACTCTCATTTTCCTCTCACTGCTCATGGTTTTCCT
TCTGCTGTCCGCGGCCTATTGGCAACTAGGCCAAGGGAATGCATCTGTTGGTGATCGGTGTGTAAAAGTGAGTAT
CATTCTCATTATTTCTCTGCTATTTTGACTGGATTCTAACCCGATCTTTCTCCCAGGGTGCTGGAGCTTCGCTCT
TTGTTGCTAGTTTACTCGGCTTTTACCTGTTGATTGTTCAACTGTTTGGGTCCATAGGGTTCCCATGCGTTTTGC
CGGTTGGAGACTTGGCAGTACTTTGGACCCGCAATGAAGACAAGTGAGTCTCCTAAAAACAATCGAATAGTTCGT
TCTGACATAATACAAGAGAGCGAGAGGATGTTGAACAGCCAAACGCTCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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