Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8427.t1
Gene name
Locationscaffold_32:194564..194969
Strand-
Gene length (bp)405
Transcript length (bp)270
Coding sequence length (bp)270
Protein length (aa) 90

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00734 CBM_1 Fungal cellulose binding domain 5.3E-12 20 47

GO

GO Term Description Terminal node
GO:0030248 cellulose binding Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0005576 extracellular region Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0030247 polysaccharide binding No
GO:0110165 cellular anatomical entity No
GO:0030246 carbohydrate binding No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8427.t1
MKTLAILSLTSLVSAEAAPYAQCGGTGYSGSTTCVSGWTCQYQNDWFSQCLEYSGSGTTTLSATISTTKSTATTK
LLCRFQFLLDWLPH*
Coding >Pro_DTO377G3_2|g8427.t1
ATGAAAACACTAGCAATCTTATCATTGACTAGTCTGGTCTCTGCCGAAGCTGCTCCCTACGCTCAATGTGGTGGA
ACTGGCTATTCTGGCTCCACAACATGTGTCTCTGGCTGGACTTGCCAATATCAGAATGACTGGTTTAGCCAATGC
CTCGAATATTCTGGCAGTGGTACCACCACTCTATCGGCAACGATAAGTACAACTAAGTCGACGGCTACAACAAAG
CTACTTTGCCGGTTCCAATTCCTACTGGATTGGCTTCCTCACTAA
Transcript >Pro_DTO377G3_2|g8427.t1
ATGAAAACACTAGCAATCTTATCATTGACTAGTCTGGTCTCTGCCGAAGCTGCTCCCTACGCTCAATGTGGTGGA
ACTGGCTATTCTGGCTCCACAACATGTGTCTCTGGCTGGACTTGCCAATATCAGAATGACTGGTTTAGCCAATGC
CTCGAATATTCTGGCAGTGGTACCACCACTCTATCGGCAACGATAAGTACAACTAAGTCGACGGCTACAACAAAG
CTACTTTGCCGGTTCCAATTCCTACTGGATTGGCTTCCTCACTAA
Gene >Pro_DTO377G3_2|g8427.t1
ATGAAAACACTAGCAATCTTATCATTGACTAGTCTGGTCTCTGCCGAAGCTGCTCCCTACGCTCAATGTGGTGGA
ACTGGCTATTCTGGCTCCACAACATGTGTCTCTGGCTGGACTTGCCAATATCAGAATGACTGGTTTAGCCAATGC
CTCGAATGTAAGTGTGCTCAGATATGTTCCAATATTGTTCAGTCGATTGACACGGAAAACTCCAGATTCTGGCAG
TGGTACCACCACTCTATCGGCAACGATAAGTACAACTAAGTCGACGGCTACAACAAAGGTAACCGCCACCAGTAC
TAGTGGGGTGGAGTTCCCCACTATAAATGGACTAGAATTTGAAATTGATGGAAAGACAAGCTACTTTGCCGGTTC
CAATTCCTACTGGATTGGCTTCCTCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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