Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8421.t1
Gene name
Locationscaffold_32:180315..181942
Strand+
Gene length (bp)1627
Transcript length (bp)1224
Coding sequence length (bp)1224
Protein length (aa) 408

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01494 FAD_binding_3 FAD binding domain 3.8E-22 9 360
PF01266 DAO FAD dependent oxidoreductase 6.2E-07 9 43
PF00890 FAD_binding_2 FAD binding domain 4.2E-07 9 40
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 2.0E-06 12 39
PF05834 Lycopene_cycl Lycopene cyclase protein 1.5E-06 9 165

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0071949 FAD binding Yes
GO:0016491 oxidoreductase activity Yes
GO:0005488 binding No
GO:0000166 nucleotide binding No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0050660 flavin adenine dinucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8421.t1
MTVSAQPLDVLVVGAGIAGLSTAIALGKQGHRVVILEKSAFLKETGAAIHLPPNCTALLRWMGIDPADFGGTLLH
QIHRYRFDGELTYKREFADTRHHWQAEWYLVHRVELHNHLKQRALETATLHTGCRITEVNLEGACPSVTLGDGRT
FKADLLLGADGLHSQIRQSIAPGSPSPYPVGKSCFRWLLPTDQLKQHASTVDFVRDTGVFIEWASHDRRLVAYPC
SDSKILNLCAFVPLNEVQADNQSDTWQSVGDQTTIVRAFSKFSPGVQQIIASADKNLKVWDLYDMEELPTWTRGH
AALLGDAAHPFQPYLGQGAAMAIEDAVSIATLLPCGSTPDDVPTRLEMYQAGRRPRVNFVLHYTRINGRDEDDTA
GDRLSAVEMVKVMNICFSYNEIEHSTKLLEDR*
Coding >Pro_DTO377G3_2|g8421.t1
ATGACGGTATCAGCCCAGCCTCTTGACGTCCTCGTCGTCGGCGCCGGCATTGCTGGTCTCTCAACAGCTATTGCC
CTCGGAAAACAGGGGCATCGTGTTGTGATTCTGGAAAAGTCTGCTTTTTTGAAAGAAACTGGGGCTGCGATCCAT
TTGCCGCCGAATTGCACTGCTTTGCTACGCTGGATGGGCATTGATCCAGCAGATTTCGGAGGCACATTGCTTCAT
CAGATACACCGATATAGATTTGACGGGGAGTTGACATACAAGAGAGAGTTTGCTGACACTCGTCATCATTGGCAA
GCGGAGTGGTACCTCGTGCATCGAGTTGAGCTACACAACCACCTCAAACAACGTGCCCTTGAAACCGCAACGTTG
CATACAGGGTGTAGAATAACCGAGGTCAATCTGGAAGGGGCTTGTCCGTCGGTCACTCTCGGTGATGGTCGCACT
TTCAAGGCTGACCTGCTCCTTGGTGCAGATGGACTACATTCCCAAATTCGCCAGAGTATCGCACCAGGATCTCCC
TCCCCATACCCCGTTGGCAAGTCATGCTTCCGTTGGCTTCTTCCCACAGATCAATTAAAGCAACATGCGAGCACT
GTTGATTTTGTGCGAGACACCGGCGTGTTTATTGAGTGGGCATCCCATGACCGGCGGCTCGTGGCTTACCCTTGC
TCTGATAGCAAGATCCTCAATCTTTGTGCTTTTGTCCCTTTGAATGAAGTTCAGGCAGACAACCAAAGTGACACC
TGGCAGTCAGTTGGAGACCAGACTACAATTGTGAGGGCCTTTTCGAAGTTTTCACCCGGTGTTCAGCAAATTATT
GCAAGTGCAGACAAAAATCTCAAAGTATGGGATCTTTATGATATGGAGGAACTGCCGACTTGGACTCGAGGCCAC
GCTGCTCTTCTGGGAGATGCAGCACATCCGTTCCAGCCATACTTGGGCCAGGGAGCAGCTATGGCAATCGAAGAT
GCAGTTAGCATTGCCACCTTGCTCCCTTGTGGCAGTACGCCGGACGATGTCCCCACGCGACTTGAAATGTACCAA
GCGGGCCGTCGGCCACGGGTCAACTTTGTCCTCCACTACACTCGGATAAATGGACGGGATGAGGATGATACAGCC
GGTGATAGATTATCAGCTGTGGAAATGGTGAAAGTCATGAATATTTGTTTCTCATACAATGAGATTGAGCACTCT
ACAAAGTTGCTGGAGGATAGATGA
Transcript >Pro_DTO377G3_2|g8421.t1
ATGACGGTATCAGCCCAGCCTCTTGACGTCCTCGTCGTCGGCGCCGGCATTGCTGGTCTCTCAACAGCTATTGCC
CTCGGAAAACAGGGGCATCGTGTTGTGATTCTGGAAAAGTCTGCTTTTTTGAAAGAAACTGGGGCTGCGATCCAT
TTGCCGCCGAATTGCACTGCTTTGCTACGCTGGATGGGCATTGATCCAGCAGATTTCGGAGGCACATTGCTTCAT
CAGATACACCGATATAGATTTGACGGGGAGTTGACATACAAGAGAGAGTTTGCTGACACTCGTCATCATTGGCAA
GCGGAGTGGTACCTCGTGCATCGAGTTGAGCTACACAACCACCTCAAACAACGTGCCCTTGAAACCGCAACGTTG
CATACAGGGTGTAGAATAACCGAGGTCAATCTGGAAGGGGCTTGTCCGTCGGTCACTCTCGGTGATGGTCGCACT
TTCAAGGCTGACCTGCTCCTTGGTGCAGATGGACTACATTCCCAAATTCGCCAGAGTATCGCACCAGGATCTCCC
TCCCCATACCCCGTTGGCAAGTCATGCTTCCGTTGGCTTCTTCCCACAGATCAATTAAAGCAACATGCGAGCACT
GTTGATTTTGTGCGAGACACCGGCGTGTTTATTGAGTGGGCATCCCATGACCGGCGGCTCGTGGCTTACCCTTGC
TCTGATAGCAAGATCCTCAATCTTTGTGCTTTTGTCCCTTTGAATGAAGTTCAGGCAGACAACCAAAGTGACACC
TGGCAGTCAGTTGGAGACCAGACTACAATTGTGAGGGCCTTTTCGAAGTTTTCACCCGGTGTTCAGCAAATTATT
GCAAGTGCAGACAAAAATCTCAAAGTATGGGATCTTTATGATATGGAGGAACTGCCGACTTGGACTCGAGGCCAC
GCTGCTCTTCTGGGAGATGCAGCACATCCGTTCCAGCCATACTTGGGCCAGGGAGCAGCTATGGCAATCGAAGAT
GCAGTTAGCATTGCCACCTTGCTCCCTTGTGGCAGTACGCCGGACGATGTCCCCACGCGACTTGAAATGTACCAA
GCGGGCCGTCGGCCACGGGTCAACTTTGTCCTCCACTACACTCGGATAAATGGACGGGATGAGGATGATACAGCC
GGTGATAGATTATCAGCTGTGGAAATGGTGAAAGTCATGAATATTTGTTTCTCATACAATGAGATTGAGCACTCT
ACAAAGTTGCTGGAGGATAGATGA
Gene >Pro_DTO377G3_2|g8421.t1
ATGACGGTATCAGCCCAGCCTCTTGACGTCCTCGTCGTCGGCGCCGGCATTGCTGGTCTCTCAACAGCTATTGCC
CTCGGAAAACAGGGGCATCGTGTTGTGGTATGCCCCGGGCAACAACCCAAGCTTGCTGCAAAATTAATTTCTCAC
CAAGCCTAGATTCTGGAAAAGTCTGCTTTTTTGAAAGAAACTGGGGCTGCGATCCATTTGCCGCCGAATTGCACT
GCTTTGCTACGCTGGATGGGCATTGATCCAGCAGATTTCGGAGGCACATTGCTTCATCAGGTCAGATTTGTCTCT
TGACAAGAAGAGTGGCTGGAATTGATATTTTTTGCTTTCTCCAGATACACCGATATAGATTTGACGGGGAGTTGA
CATACAAGAGAGAGTTTGCTGACACTCGTCATCATTGGCAAGCGGTAGGCGAATGAAGCGGACCCAGCCAGGACA
ATATCTAATCTGAACACAGGAGTGGTACCTCGTGCATCGAGTTGAGCTACACAACCACCTCAAACAACGTGCCCT
TGAAACCGCAACGTTGCATACAGGGTGTAGAATAACCGAGGTCAATCTGGAAGGGGCTTGTCCGTCGGTCACTCT
CGGTGATGGTCGCACTTTCAAGGCTGACCTGCTCCTTGGTGCAGATGGACTACATGTATGAACACTAGATTATCA
ACACCGGTGTTTATCCAGCTCTCGTCCCTGTTCTAACTGTTCTATAGTCCCAAATTCGCCAGAGTATCGCACCAG
GATCTCCCTCCCCATACCCCGTTGGCAAGTCATGCTTCCGTTGGCTTCTTCCCACAGATCAATTAAAGCAACATG
CGAGCACTGTTGATTTTGTGCGAGACACCGGCGTGTTTATTGAGTGGGCATCCCATGACCGGCGGCTCGTGGCTT
ACCCTTGCTCTGATAGCAAGATCCTCAATCTTTGTGCTTTTGTCCCTTTGAATGAAGTTCAGGCAGACAACCAAA
GTGACAGTAAGAGGTTTCCGGGGGTTGATACAGAAGGTTACTGACAAATTGGGATTAATAGCCTGGCAGTCAGTT
GGAGACCAGACTACAATTGTGAGGGCCTTTTCGAAGTTTTCACCCGGTGTTCAGCAAATTATTGCAAGTGCAGAC
AAAAATCTCAAAGTATGGGATCTTTATGATATGGAGGAACTGCCGACTTGGACTCGAGGCCACGCTGCTCTTCTG
GGAGATGCAGCACATCCGTTCCAGCCATGTAAGCAACCGAATAGCTGCAAATGGACAAACTTGTTTTGTGTGACA
TACACTGACAACTCGATAGACTTGGGCCAGGGAGCAGCTATGGCAATCGAAGATGCAGTTAGCATTGCCACCTTG
CTCCCTTGTGGCAGTACGCCGGACGATGTCCCCACGCGACTTGAAATGTACCAAGCGGGCCGTCGGCCACGGGTC
AACTTTGTCCTCCACTACACTCGGATAAATGGACGGGATGAGGATGATACAGCCGGTGATAGATTATCAGGTGTG
TTAGTTTTAAGAGCCTTGGAATGGATCCAAACTGACAATGATAGCTGTGGAAATGGTGAAAGTCATGAATATTTG
TTTCTCATACAATGAGATTGAGCACTCTACAAAGTTGCTGGAGGATAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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