Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8417.t1
Gene name
Locationscaffold_32:172501..173985
Strand-
Gene length (bp)1484
Transcript length (bp)1422
Coding sequence length (bp)1422
Protein length (aa) 474

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00494 SQS_PSY Squalene/phytoene synthase 7.5E-39 50 329

GO

GO Term Description Terminal node
GO:0009058 biosynthetic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 420 442 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8417.t1
MGLIGNALYYSFHPMQLRSILQWKVWHNPPHERNEKNETENQKICFQFLDKTSRSFSAVIKELHPELLIPICIFY
LVLRGLDTIEDDTSIPLATKEPLLRDFKDILTQDGWTFTGNRPEEKDRELLVQFNHVVTEFMNMKPEYQVIIKDI
TEKMGNGMADYAVKAEHDDASVKTKEEYDLYCYYVAGLVGEGLTRLFVEAGFGNPALLKRPKLHKSMGLFLQKTN
IIRDIREDFDDNRRFWPQEIWSKHVDNFEDLFKPEHLDAALNCSSEMVLNALEHAEECLFYLAGMREQSVFNFCA
IPQSMAIATMELCFRNPDIFQRNIKITKGDACELMHKSTQNLSVLCDTFRQYTRKIHKKNTPRDPNFLKISIVCG
QIEKFIETIFPTQSAEAANRKVSGELTAAELQKKKEDDENKSDVYFMMALMGVIVVVIASLMIFAAWMMGARFDL
AFKEITSGHFRPPAKNQLEHPEL*
Coding >Pro_DTO377G3_2|g8417.t1
ATGGGTCTCATCGGCAATGCTCTCTACTACTCTTTCCACCCCATGCAGCTGAGGTCAATTCTCCAATGGAAAGTC
TGGCACAACCCGCCCCATGAGCGTAACGAGAAGAACGAGACCGAGAATCAGAAGATCTGTTTCCAGTTTTTGGAC
AAAACCAGCCGCAGCTTCAGCGCCGTGATCAAGGAGTTACATCCCGAATTGTTAATCCCTATCTGCATCTTCTAC
TTGGTCCTCCGTGGACTGGATACCATCGAGGATGACACTTCCATTCCATTGGCCACCAAGGAACCTCTTCTCCGG
GACTTTAAGGACATCTTGACGCAAGATGGCTGGACTTTTACTGGGAATCGGCCGGAGGAGAAGGACCGTGAGCTG
CTGGTTCAGTTCAACCACGTCGTCACCGAGTTCATGAACATGAAGCCTGAATACCAGGTTATCATCAAGGACATC
ACTGAGAAGATGGGTAATGGCATGGCTGACTATGCTGTGAAGGCAGAGCATGACGATGCTAGTGTGAAGACTAAG
GAGGAGTATGATCTATACTGCTACTACGTCGCTGGATTGGTTGGCGAGGGCCTCACTCGCCTCTTCGTCGAGGCC
GGGTTTGGTAACCCGGCTCTGTTGAAGCGACCTAAGTTACATAAGTCAATGGGTCTTTTCCTCCAGAAGACTAAT
ATCATCCGCGATATCCGAGAGGATTTCGATGATAACCGACGTTTCTGGCCTCAGGAAATTTGGTCCAAGCATGTC
GACAACTTTGAAGATCTCTTCAAGCCAGAGCACCTTGATGCAGCTCTTAACTGCAGCTCGGAGATGGTCCTGAAC
GCGTTGGAGCATGCTGAGGAGTGCCTGTTCTACTTGGCCGGTATGCGAGAGCAGAGTGTTTTCAACTTCTGTGCA
ATCCCGCAGTCTATGGCCATCGCCACAATGGAGTTGTGTTTCCGCAACCCCGATATCTTCCAGCGCAACATTAAA
ATCACCAAGGGAGACGCATGTGAACTCATGCATAAGTCAACCCAAAACTTGTCGGTTCTGTGCGACACCTTCCGC
CAATATACGCGCAAGATTCACAAGAAGAATACCCCCCGGGATCCCAACTTCCTGAAGATCAGCATTGTCTGCGGA
CAGATTGAGAAGTTCATTGAGACCATCTTCCCGACGCAATCCGCCGAGGCCGCTAACCGTAAGGTCTCTGGTGAG
CTCACTGCGGCCGAGCTACAGAAGAAGAAGGAAGACGACGAGAACAAGAGTGATGTCTACTTCATGATGGCTCTC
ATGGGAGTCATTGTTGTCGTTATCGCTAGTCTCATGATCTTCGCCGCCTGGATGATGGGCGCCCGGTTCGACCTT
GCCTTTAAGGAGATCACGTCTGGCCACTTCAGGCCGCCGGCTAAGAACCAGCTTGAACACCCGGAGCTTTGA
Transcript >Pro_DTO377G3_2|g8417.t1
ATGGGTCTCATCGGCAATGCTCTCTACTACTCTTTCCACCCCATGCAGCTGAGGTCAATTCTCCAATGGAAAGTC
TGGCACAACCCGCCCCATGAGCGTAACGAGAAGAACGAGACCGAGAATCAGAAGATCTGTTTCCAGTTTTTGGAC
AAAACCAGCCGCAGCTTCAGCGCCGTGATCAAGGAGTTACATCCCGAATTGTTAATCCCTATCTGCATCTTCTAC
TTGGTCCTCCGTGGACTGGATACCATCGAGGATGACACTTCCATTCCATTGGCCACCAAGGAACCTCTTCTCCGG
GACTTTAAGGACATCTTGACGCAAGATGGCTGGACTTTTACTGGGAATCGGCCGGAGGAGAAGGACCGTGAGCTG
CTGGTTCAGTTCAACCACGTCGTCACCGAGTTCATGAACATGAAGCCTGAATACCAGGTTATCATCAAGGACATC
ACTGAGAAGATGGGTAATGGCATGGCTGACTATGCTGTGAAGGCAGAGCATGACGATGCTAGTGTGAAGACTAAG
GAGGAGTATGATCTATACTGCTACTACGTCGCTGGATTGGTTGGCGAGGGCCTCACTCGCCTCTTCGTCGAGGCC
GGGTTTGGTAACCCGGCTCTGTTGAAGCGACCTAAGTTACATAAGTCAATGGGTCTTTTCCTCCAGAAGACTAAT
ATCATCCGCGATATCCGAGAGGATTTCGATGATAACCGACGTTTCTGGCCTCAGGAAATTTGGTCCAAGCATGTC
GACAACTTTGAAGATCTCTTCAAGCCAGAGCACCTTGATGCAGCTCTTAACTGCAGCTCGGAGATGGTCCTGAAC
GCGTTGGAGCATGCTGAGGAGTGCCTGTTCTACTTGGCCGGTATGCGAGAGCAGAGTGTTTTCAACTTCTGTGCA
ATCCCGCAGTCTATGGCCATCGCCACAATGGAGTTGTGTTTCCGCAACCCCGATATCTTCCAGCGCAACATTAAA
ATCACCAAGGGAGACGCATGTGAACTCATGCATAAGTCAACCCAAAACTTGTCGGTTCTGTGCGACACCTTCCGC
CAATATACGCGCAAGATTCACAAGAAGAATACCCCCCGGGATCCCAACTTCCTGAAGATCAGCATTGTCTGCGGA
CAGATTGAGAAGTTCATTGAGACCATCTTCCCGACGCAATCCGCCGAGGCCGCTAACCGTAAGGTCTCTGGTGAG
CTCACTGCGGCCGAGCTACAGAAGAAGAAGGAAGACGACGAGAACAAGAGTGATGTCTACTTCATGATGGCTCTC
ATGGGAGTCATTGTTGTCGTTATCGCTAGTCTCATGATCTTCGCCGCCTGGATGATGGGCGCCCGGTTCGACCTT
GCCTTTAAGGAGATCACGTCTGGCCACTTCAGGCCGCCGGCTAAGAACCAGCTTGAACACCCGGAGCTTTGA
Gene >Pro_DTO377G3_2|g8417.t1
ATGGGTCTCATCGGCAATGCTCTCTACTACTCTTTCCACCCCATGCAGCTGAGGTCAATTCTCCAATGGTATGTT
TTGGTGTTCCTGAAGCTCATTCCCACATGCGAAGCTAACGATCCACGTCACATAGGAAAGTCTGGCACAACCCGC
CCCATGAGCGTAACGAGAAGAACGAGACCGAGAATCAGAAGATCTGTTTCCAGTTTTTGGACAAAACCAGCCGCA
GCTTCAGCGCCGTGATCAAGGAGTTACATCCCGAATTGTTAATCCCTATCTGCATCTTCTACTTGGTCCTCCGTG
GACTGGATACCATCGAGGATGACACTTCCATTCCATTGGCCACCAAGGAACCTCTTCTCCGGGACTTTAAGGACA
TCTTGACGCAAGATGGCTGGACTTTTACTGGGAATCGGCCGGAGGAGAAGGACCGTGAGCTGCTGGTTCAGTTCA
ACCACGTCGTCACCGAGTTCATGAACATGAAGCCTGAATACCAGGTTATCATCAAGGACATCACTGAGAAGATGG
GTAATGGCATGGCTGACTATGCTGTGAAGGCAGAGCATGACGATGCTAGTGTGAAGACTAAGGAGGAGTATGATC
TATACTGCTACTACGTCGCTGGATTGGTTGGCGAGGGCCTCACTCGCCTCTTCGTCGAGGCCGGGTTTGGTAACC
CGGCTCTGTTGAAGCGACCTAAGTTACATAAGTCAATGGGTCTTTTCCTCCAGAAGACTAATATCATCCGCGATA
TCCGAGAGGATTTCGATGATAACCGACGTTTCTGGCCTCAGGAAATTTGGTCCAAGCATGTCGACAACTTTGAAG
ATCTCTTCAAGCCAGAGCACCTTGATGCAGCTCTTAACTGCAGCTCGGAGATGGTCCTGAACGCGTTGGAGCATG
CTGAGGAGTGCCTGTTCTACTTGGCCGGTATGCGAGAGCAGAGTGTTTTCAACTTCTGTGCAATCCCGCAGTCTA
TGGCCATCGCCACAATGGAGTTGTGTTTCCGCAACCCCGATATCTTCCAGCGCAACATTAAAATCACCAAGGGAG
ACGCATGTGAACTCATGCATAAGTCAACCCAAAACTTGTCGGTTCTGTGCGACACCTTCCGCCAATATACGCGCA
AGATTCACAAGAAGAATACCCCCCGGGATCCCAACTTCCTGAAGATCAGCATTGTCTGCGGACAGATTGAGAAGT
TCATTGAGACCATCTTCCCGACGCAATCCGCCGAGGCCGCTAACCGTAAGGTCTCTGGTGAGCTCACTGCGGCCG
AGCTACAGAAGAAGAAGGAAGACGACGAGAACAAGAGTGATGTCTACTTCATGATGGCTCTCATGGGAGTCATTG
TTGTCGTTATCGCTAGTCTCATGATCTTCGCCGCCTGGATGATGGGCGCCCGGTTCGACCTTGCCTTTAAGGAGA
TCACGTCTGGCCACTTCAGGCCGCCGGCTAAGAACCAGCTTGAACACCCGGAGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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