Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g84.t1
Gene name
Locationscaffold_01:217963..218937
Strand+
Gene length (bp)974
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.6E-35 16 240
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.9E-30 24 295
PF08659 KR KR domain 1.7E-07 17 98

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g84.t1
MAHLQASNLFSVKDRVVVITGGGSGLGRIMTKALDANEVSKIFILGRREDALQETVSQSINGTIIPIQCDITSKE
SLEAAYNAIAAQTTHVDLLIANSGIMGPLMKPPQPAADGTLPPLSQVRDELFNIPMEEFNKVMNVNVTGSYYTVL
AFLPLLEAANKRRPAPQKDVLAAPTAQVIITSSIAGFIRKVPFSFAYNSSKAATTHLVKMLSTSFAYYGIRVNGI
SPGLYYSDMANHIFQAAGIEGRAISDGSFPRDMIPATRGGSEEDFAGLIVWLASNSGGYINGNILVTDGGRISVC
PAVY*
Coding >Pro_DTO377G3_2|g84.t1
ATGGCCCATCTTCAAGCATCGAATCTATTCTCGGTCAAGGACCGGGTGGTCGTGATCACCGGCGGCGGAAGTGGC
CTCGGACGTATCATGACTAAAGCCCTGGACGCCAATGAAGTCTCCAAGATCTTCATCCTAGGCCGACGCGAAGAC
GCGCTACAAGAAACCGTCTCGCAAAGCATAAACGGCACCATCATCCCAATCCAATGCGACATCACCTCGAAAGAA
TCACTGGAGGCAGCCTACAACGCCATCGCCGCCCAAACAACACACGTCGACCTCCTAATTGCCAACAGCGGCATA
ATGGGTCCCCTCATGAAGCCCCCGCAACCCGCAGCAGACGGGACCCTCCCGCCGCTGTCGCAAGTACGCGATGAA
CTCTTCAATATCCCCATGGAGGAGTTTAACAAAGTGATGAATGTAAATGTTACCGGGTCGTACTACACGGTGCTG
GCGTTCTTGCCTCTGCTGGAGGCGGCCAATAAGCGCCGTCCTGCGCCGCAGAAGGATGTTCTTGCTGCCCCGACT
GCGCAGGTTATTATCACTAGCTCTATTGCTGGGTTTATTCGCAAGGTGCCGTTCAGCTTCGCGTATAACTCTTCC
AAGGCCGCTACGACCCATCTGGTCAAGATGCTTTCGACTTCGTTTGCTTATTACGGTATTCGGGTTAATGGCATC
TCGCCAGGTCTGTACTACTCAGATATGGCCAATCATATCTTCCAGGCTGCGGGTATTGAGGGTCGCGCGATTTCT
GACGGCTCATTCCCGAGGGACATGATTCCTGCCACTCGCGGTGGTAGTGAGGAGGACTTTGCGGGTTTGATTGTT
TGGCTGGCTAGTAACTCGGGTGGTTATATCAATGGTAATATCTTAGTTACTGATGGTGGTCGGATTTCTGTTTGC
CCTGCTGTGTACTAA
Transcript >Pro_DTO377G3_2|g84.t1
ATGGCCCATCTTCAAGCATCGAATCTATTCTCGGTCAAGGACCGGGTGGTCGTGATCACCGGCGGCGGAAGTGGC
CTCGGACGTATCATGACTAAAGCCCTGGACGCCAATGAAGTCTCCAAGATCTTCATCCTAGGCCGACGCGAAGAC
GCGCTACAAGAAACCGTCTCGCAAAGCATAAACGGCACCATCATCCCAATCCAATGCGACATCACCTCGAAAGAA
TCACTGGAGGCAGCCTACAACGCCATCGCCGCCCAAACAACACACGTCGACCTCCTAATTGCCAACAGCGGCATA
ATGGGTCCCCTCATGAAGCCCCCGCAACCCGCAGCAGACGGGACCCTCCCGCCGCTGTCGCAAGTACGCGATGAA
CTCTTCAATATCCCCATGGAGGAGTTTAACAAAGTGATGAATGTAAATGTTACCGGGTCGTACTACACGGTGCTG
GCGTTCTTGCCTCTGCTGGAGGCGGCCAATAAGCGCCGTCCTGCGCCGCAGAAGGATGTTCTTGCTGCCCCGACT
GCGCAGGTTATTATCACTAGCTCTATTGCTGGGTTTATTCGCAAGGTGCCGTTCAGCTTCGCGTATAACTCTTCC
AAGGCCGCTACGACCCATCTGGTCAAGATGCTTTCGACTTCGTTTGCTTATTACGGTATTCGGGTTAATGGCATC
TCGCCAGGTCTGTACTACTCAGATATGGCCAATCATATCTTCCAGGCTGCGGGTATTGAGGGTCGCGCGATTTCT
GACGGCTCATTCCCGAGGGACATGATTCCTGCCACTCGCGGTGGTAGTGAGGAGGACTTTGCGGGTTTGATTGTT
TGGCTGGCTAGTAACTCGGGTGGTTATATCAATGGTAATATCTTAGTTACTGATGGTGGTCGGATTTCTGTTTGC
CCTGCTGTGTACTAA
Gene >Pro_DTO377G3_2|g84.t1
ATGGCCCATCTTCAAGCATCGAATCTATTCTCGGTCAAGGACCGGGTGGTCGTGATCACCGGCGGCGGAAGTGGT
AAGAACCTAATTATATCACAGATACAAACGTGTACATGTAAGCTAACAGAAACACAGGCCTCGGACGTATCATGA
CTAAAGCCCTGGACGCCAATGAAGTCTCCAAGATCTTCATCCTAGGCCGACGCGAAGACGCGCTACAAGAAACCG
TCTCGCAAAGCATAAACGGCACCATCATCCCAATCCAATGCGACATCACCTCGAAAGAATCACTGGAGGCAGCCT
ACAACGCCATCGCCGCCCAAACAACACACGTCGACCTCCTAATTGCCAACAGCGGCATAATGGGTCCCCTCATGA
AGCCCCCGCAACCCGCAGCAGACGGGACCCTCCCGCCGCTGTCGCAAGTACGCGATGAACTCTTCAATATCCCCA
TGGAGGAGTTTAACAAAGTGATGAATGTAAATGTTACCGGGTCGTACTACACGGTGCTGGCGTTCTTGCCTCTGC
TGGAGGCGGCCAATAAGCGCCGTCCTGCGCCGCAGAAGGATGTTCTTGCTGCCCCGACTGCGCAGGTTATTATCA
CTAGCTCTATTGCTGGGTTTATTCGCAAGGTGCCGTTCAGCTTCGCGTATAACTCTTCCAAGGCCGCTACGACCC
ATCTGGTCAAGATGCTTTCGACTTCGTTTGCTTATTACGGTATTCGGGTTAATGGCATCTCGCCAGGTCTGTACT
ACTCAGATATGGCCAATCATATCTTCCAGGCTGCGGGTATTGAGGGTCGCGCGATTTCTGACGGCTCATTCCCGA
GGGACATGATTCCTGCCACTCGCGGTGGTAGTGAGGAGGACTTTGCGGGTTTGATTGTTTGGCTGGCTAGTAACT
CGGGTGGTTATATCAATGGTAATATCTTAGTTACTGATGGTGGTCGGATTTCTGTTTGCCCTGCTGTGTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail