Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8394.t1
Gene name
Locationscaffold_32:123828..124965
Strand-
Gene length (bp)1137
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01036 Bac_rhodopsin Bacteriorhodopsin-like protein 2.3E-19 44 267

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 44 63 19
2 76 98 22
3 122 144 22
4 149 171 22
5 181 198 17
6 218 240 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8394.t1
MIQPPFDQFATLTAPATTSSVAPIPTIIPGYEVYQELHDTGKRTLWVVTVLMGVSSLVFYTLAARAPLSKRIFHI
LTSLITTISFVIYLALSTGQGIITKHDRVHESHKHVPDTHTDYARQILWLRFVNWAITTPLLFINLALLSGLPGA
NLLIAIVAHLIMLTTAVFGIFSGHGRERWVWLTLTCISYLVVIHHIGFHAQRAAKSKDIQTRRFFGSVSGSAIAM
LALFPISLAAGALALRLSVDTETILFAIQDVFTQGILGYWLLFTHESSPGIALYMEGFWSHGVGNEGAIRISDEE
GA*
Coding >Pro_DTO377G3_2|g8394.t1
ATGATTCAACCTCCATTTGATCAGTTTGCTACTCTAACGGCGCCCGCCACCACGTCCTCGGTGGCGCCTATTCCC
ACTATCATTCCGGGGTATGAGGTCTACCAGGAACTTCATGATACAGGCAAGCGAACTCTTTGGGTTGTCACTGTG
TTGATGGGCGTTTCCTCGCTGGTGTTCTATACTTTGGCCGCTCGTGCTCCTCTATCTAAACGAATCTTTCATATC
CTCACCTCCCTGATAACCACAATCTCCTTCGTGATCTACCTAGCTCTTTCAACAGGCCAGGGCATAATAACCAAA
CACGACAGAGTCCACGAATCCCACAAACATGTCCCGGACACCCACACAGACTACGCTCGCCAGATCCTATGGCTG
CGCTTTGTTAACTGGGCCATCACCACACCCCTGCTCTTCATCAACCTCGCCCTTCTATCCGGCCTACCAGGCGCA
AACCTACTCATCGCCATTGTCGCCCACCTGATCATGCTTACAACAGCTGTATTCGGCATATTTTCAGGACACGGC
CGCGAGCGCTGGGTCTGGCTGACCCTCACATGTATTTCTTACCTGGTCGTGATCCACCACATTGGCTTCCACGCA
CAGCGAGCGGCGAAGAGCAAGGATATCCAGACAAGACGGTTCTTTGGGTCTGTTTCTGGGTCTGCAATTGCCATG
TTGGCACTTTTCCCAATTTCCCTCGCGGCTGGTGCTCTCGCGCTCAGACTGAGTGTTGACACGGAGACTATCCTT
TTCGCTATCCAGGATGTCTTCACGCAAGGTATCCTTGGATACTGGCTTCTGTTCACTCATGAGAGTTCGCCTGGA
ATTGCACTCTACATGGAAGGATTCTGGTCGCATGGTGTCGGCAATGAGGGAGCTATTCGTATCTCCGATGAAGAG
GGTGCGTAA
Transcript >Pro_DTO377G3_2|g8394.t1
ATGATTCAACCTCCATTTGATCAGTTTGCTACTCTAACGGCGCCCGCCACCACGTCCTCGGTGGCGCCTATTCCC
ACTATCATTCCGGGGTATGAGGTCTACCAGGAACTTCATGATACAGGCAAGCGAACTCTTTGGGTTGTCACTGTG
TTGATGGGCGTTTCCTCGCTGGTGTTCTATACTTTGGCCGCTCGTGCTCCTCTATCTAAACGAATCTTTCATATC
CTCACCTCCCTGATAACCACAATCTCCTTCGTGATCTACCTAGCTCTTTCAACAGGCCAGGGCATAATAACCAAA
CACGACAGAGTCCACGAATCCCACAAACATGTCCCGGACACCCACACAGACTACGCTCGCCAGATCCTATGGCTG
CGCTTTGTTAACTGGGCCATCACCACACCCCTGCTCTTCATCAACCTCGCCCTTCTATCCGGCCTACCAGGCGCA
AACCTACTCATCGCCATTGTCGCCCACCTGATCATGCTTACAACAGCTGTATTCGGCATATTTTCAGGACACGGC
CGCGAGCGCTGGGTCTGGCTGACCCTCACATGTATTTCTTACCTGGTCGTGATCCACCACATTGGCTTCCACGCA
CAGCGAGCGGCGAAGAGCAAGGATATCCAGACAAGACGGTTCTTTGGGTCTGTTTCTGGGTCTGCAATTGCCATG
TTGGCACTTTTCCCAATTTCCCTCGCGGCTGGTGCTCTCGCGCTCAGACTGAGTGTTGACACGGAGACTATCCTT
TTCGCTATCCAGGATGTCTTCACGCAAGGTATCCTTGGATACTGGCTTCTGTTCACTCATGAGAGTTCGCCTGGA
ATTGCACTCTACATGGAAGGATTCTGGTCGCATGGTGTCGGCAATGAGGGAGCTATTCGTATCTCCGATGAAGAG
GGTGCGTAA
Gene >Pro_DTO377G3_2|g8394.t1
ATGATTCAACCTCCATTTGATCAGTTTGCTACTCTAACGGCGCCCGCCACCACGTCCTCGGTGGCGCCTATTCCC
ACTATCATTCCGGGGTATGAGGTCTACCAGGAACTTCATGATACAGGCAAGCGAACTCTTTGGTATGTATATATT
ATACTATGTATTCAAATGTTTAATTATCCTAACATTTATAGGGTTGTCACTGTGTTGATGGGCGTTTCCTCGCTG
GTGTTCTATACTTTGGCCGCTCGTGCTCCTCTAGTGAGTTCATCTCTTCTATATCATATATGCTCTCTTCTATTA
TTCATACCTATCTAACATATGTCCAGTCTAAACGAATCTTTCATATCCTCACCTCCCTGATAACCACAATCTCCT
TCGTGATCTACCTAGCTCTTTCAACAGGCCAGGGCATAATAACCAAACACGACAGAGTCCACGAATCCCACAAAC
ATGTCCCGGACACCCACACAGACTACGCTCGCCAGATCCTATGGCTGCGCTTTGTTAACTGGGCCATCACCACAC
CCCTGCTCTTCATCAACCTCGCCCTTCTATCCGGCCTACCAGGCGCAAACCTACTCATCGCCATTGTCGCCCACC
TGATCATGCTTACAACAGCTGTATTCGGCATATTTTCAGGACACGGCCGCGAGCGCTGGGTCTGGCTGACCCTCA
CATGTATTTCTTACCTGGTCGTGATCCACCACATTGGCTTCCACGCACAGCGAGCGGCGAAGAGCAAGGATATCC
AGACAAGACGGTTCTTTGGGTCTGTTTCTGGGTCTGCAATTGCCATGTTGGCACTTTTCCCAATGTGAGTGATAT
ATCCAAAAGAGTACTCTTGAGTTCAAACCGATGCTAATGTTGGGTAGTTCCCTCGCGGCTGGTGCTCTCGCGCTC
AGACTGAGTGTTGACACGGAGACTATCCTTTTCGCTATCCAGGATGTCTTCACGCAAGGTATCCTTGGATACTGG
CTTCTGTTCACTCATGAGAGTTCGCCTGGAATGTAAGTCTCAAGCTGAATCTCGGTATGACGACATGCTGATTAC
TGCAGTGCACTCTACATGGAAGGATTCTGGTCGCATGGTGTCGGCAATGAGGGAGCTATTCGTATCTCCGATGAA
GAGGGTGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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