Protein ID | Pro_DTO377G3_2|g8390.t1 |
Gene name | |
Location | scaffold_32:115041..115793 |
Strand | - |
Gene length (bp) | 752 |
Transcript length (bp) | 525 |
Coding sequence length (bp) | 525 |
Protein length (aa) | 175 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04117 | Mpv17_PMP22 | Mpv17 / PMP22 family | 7.6E-24 | 110 | 166 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 32 | 0.840511 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 32 | 19 |
2 | 52 | 71 | 19 |
Orthofinder run ID | 2 |
Orthogroup | 7583 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8390.t1 MLRWYQSKLAKRPILTASITSAFLFGSGDVLAQQAVDRKGLQEHDFARTGRMALYGGAVFGPVATTWFGILQRHV VLKGTASTTAARVAADQVFFAPTQLTCFLSSMAIMEGADPVERLKTAFVPAYKANLMVWPFVQGVNFTFIPLELR LLFVNVVSLGWNCFLSLMNSGEEL* |
Coding | >Pro_DTO377G3_2|g8390.t1 ATGCTACGCTGGTACCAGTCTAAGTTGGCAAAGCGGCCTATCCTCACCGCAAGCATCACCAGTGCTTTCCTATTC GGTAGCGGGGATGTTCTAGCCCAGCAAGCTGTTGACCGAAAAGGTCTCCAAGAGCACGACTTCGCTCGTACTGGG CGAATGGCTCTATACGGTGGAGCTGTCTTCGGTCCGGTTGCCACTACCTGGTTTGGCATCCTCCAGCGTCATGTC GTTCTCAAAGGCACTGCGTCCACCACCGCCGCTCGTGTTGCCGCCGACCAAGTCTTCTTTGCCCCCACCCAGCTC ACATGTTTCCTATCCTCGATGGCTATCATGGAAGGCGCTGATCCTGTGGAAAGGTTGAAGACTGCCTTTGTTCCC GCCTACAAGGCCAACCTGATGGTCTGGCCATTTGTACAGGGCGTCAACTTCACATTTATTCCGCTAGAGCTGCGC TTGCTCTTTGTCAACGTTGTCAGTTTGGGGTGGAACTGCTTCCTTAGCTTGATGAACAGCGGGGAGGAATTATAA |
Transcript | >Pro_DTO377G3_2|g8390.t1 ATGCTACGCTGGTACCAGTCTAAGTTGGCAAAGCGGCCTATCCTCACCGCAAGCATCACCAGTGCTTTCCTATTC GGTAGCGGGGATGTTCTAGCCCAGCAAGCTGTTGACCGAAAAGGTCTCCAAGAGCACGACTTCGCTCGTACTGGG CGAATGGCTCTATACGGTGGAGCTGTCTTCGGTCCGGTTGCCACTACCTGGTTTGGCATCCTCCAGCGTCATGTC GTTCTCAAAGGCACTGCGTCCACCACCGCCGCTCGTGTTGCCGCCGACCAAGTCTTCTTTGCCCCCACCCAGCTC ACATGTTTCCTATCCTCGATGGCTATCATGGAAGGCGCTGATCCTGTGGAAAGGTTGAAGACTGCCTTTGTTCCC GCCTACAAGGCCAACCTGATGGTCTGGCCATTTGTACAGGGCGTCAACTTCACATTTATTCCGCTAGAGCTGCGC TTGCTCTTTGTCAACGTTGTCAGTTTGGGGTGGAACTGCTTCCTTAGCTTGATGAACAGCGGGGAGGAATTATAA |
Gene | >Pro_DTO377G3_2|g8390.t1 ATGCTACGCTGGTAAGTCTCTCTTACTCATCTCCTTCAATCGCAGCTCATAACATTCAACCAGGTACCAGTCTAA GTTGGCAAAGCGGCCTATCCTCACCGCAAGCATCACCAGTGCTGTATGATTCTCTCCTTTCTCCTTTCTCTGGAC CAGTTCCTGACTCTTGTTACAACAGTTCCTATTCGGTAGCGGGGATGTTCTAGCCCAGCAAGCTGTTGACCGAAA AGGTCTCCAAGAGCACGACTTCGCTCGTACTGGGCGAATGGCTCTATACGGTGGAGGTATGTCTATATGTCTCAA GTGCCTTGTACATTGCTGATCCGTGTCTTTTCAGCTGTCTTCGGTCCGGTTGCCACTACCTGGTTTGGCATCCTC CAGCGTCATGTCGTTCTCAAAGGCACTGCGTCCACCACCGCCGCTCGTGTTGCCGCCGACCAAGTCTTCTTTGCC CCCACCCAGCTCACATGTTTCCTATCCTCGATGGCTATCATGGAAGGCGCTGATCCTGTGGAAAGGTTGAAGACT GCCTTTGTTCCCGCCTACAAGGCCAACCTGATGGTCTGGCCATTTGTACAGGGCGTCAACTTCACATTTATTCCG CTAGAGCTGCGCTTGCTCTTTGTCAACGTTGTCAGTTTGGGTGAGTAATTTGCTTCGAGGTGTTGCTGATTATGC TCCTGGCTGCAGTCACTAACAACTAAACAGGGTGGAACTGCTTCCTTAGCTTGATGAACAGCGGGGAGGAATTAT AA |