Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8382.t1
Gene name
Locationscaffold_32:94762..95505
Strand-
Gene length (bp)743
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10277 Frag1 Frag1/DRAM/Sfk1 family 3.9E-35 5 182

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 59 81 22
3 91 113 22
4 126 148 22
5 158 180 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8382.t1
MTDGLKIPYISHIGAERLKPLFIAGSAVTVVFMDLGLISERWLRHAGQLARNKGRFDKICAVGSILFSIAGAVGL
ILLSIFDTKHHSNLHDGFLAMFIACYVVCALLVCMEYIQIGRFYHPQARILLVSFFIKALFIICEVAVAIGFGVC
KRAGRNRNAAAVLEWVAALIFAFFVFSFIIDLLPSVRTKRHVPQGEKYTRPDVENRPVDF*
Coding >Pro_DTO377G3_2|g8382.t1
ATGACCGATGGGCTCAAAATTCCTTACATTTCCCATATTGGGGCTGAGAGACTCAAACCGCTGTTCATTGCGGGA
AGTGCAGTAACAGTCGTATTCATGGATCTCGGTCTCATCTCTGAGCGTTGGCTTCGTCATGCCGGCCAACTTGCC
CGAAACAAAGGGAGGTTTGACAAGATCTGTGCTGTTGGATCGATTCTTTTCTCGATCGCTGGGGCTGTAGGTCTC
ATTCTGCTGTCCATATTCGACACCAAGCATCACTCAAACCTTCACGACGGGTTTTTGGCTATGTTCATAGCATGC
TACGTGGTCTGCGCCCTCCTGGTATGTATGGAATACATCCAAATCGGCCGATTTTACCATCCGCAAGCCCGGATT
TTGTTAGTGAGCTTTTTCATCAAAGCTCTTTTCATCATCTGTGAAGTTGCTGTCGCTATTGGATTTGGCGTATGC
AAAAGAGCCGGAAGAAACAGGAACGCAGCTGCTGTTTTAGAATGGGTTGCCGCTCTTATATTCGCATTCTTTGTT
TTTTCTTTCATCATTGATCTCCTGCCGTCCGTTCGTACCAAGAGACACGTTCCCCAGGGTGAAAAGTATACTCGG
CCGGATGTGGAGAATCGACCAGTTGACTTTTAA
Transcript >Pro_DTO377G3_2|g8382.t1
ATGACCGATGGGCTCAAAATTCCTTACATTTCCCATATTGGGGCTGAGAGACTCAAACCGCTGTTCATTGCGGGA
AGTGCAGTAACAGTCGTATTCATGGATCTCGGTCTCATCTCTGAGCGTTGGCTTCGTCATGCCGGCCAACTTGCC
CGAAACAAAGGGAGGTTTGACAAGATCTGTGCTGTTGGATCGATTCTTTTCTCGATCGCTGGGGCTGTAGGTCTC
ATTCTGCTGTCCATATTCGACACCAAGCATCACTCAAACCTTCACGACGGGTTTTTGGCTATGTTCATAGCATGC
TACGTGGTCTGCGCCCTCCTGGTATGTATGGAATACATCCAAATCGGCCGATTTTACCATCCGCAAGCCCGGATT
TTGTTAGTGAGCTTTTTCATCAAAGCTCTTTTCATCATCTGTGAAGTTGCTGTCGCTATTGGATTTGGCGTATGC
AAAAGAGCCGGAAGAAACAGGAACGCAGCTGCTGTTTTAGAATGGGTTGCCGCTCTTATATTCGCATTCTTTGTT
TTTTCTTTCATCATTGATCTCCTGCCGTCCGTTCGTACCAAGAGACACGTTCCCCAGGGTGAAAAGTATACTCGG
CCGGATGTGGAGAATCGACCAGTTGACTTTTAA
Gene >Pro_DTO377G3_2|g8382.t1
ATGACCGATGGGCTCAAAATTCCGTGAGTCTAATCAATGAACCTTGGCCCTCGGCGCAACATCGAAGTTAATTCA
ACAATCAGTTACATTTCCCATATTGGGGCTGAGAGACTCAAACCGCTGTTCATTGCGGGAAGTGCAGTAACAGTC
GTATTCATGGATCTCGGTCTCATCTCTGAGCGTTGGCTTCGTCATGCCGGCCAACTTGCCCGAAACAAAGGGAGG
TTTGACAAGATCTGTGCTGTTGGATCGATTCTTTTCTCGATCGCTGGGGCTGTAGGTCTCATTCTGCTGTCCATA
TTCGACACCAAGCATCACTCAAACCTTCACGACGGGTTTTTGGCTATGTTCATAGCATGCTACGTGGTCTGCGCC
CTCCTGGTATGTATGGAATACATCCAAATCGGCCGATTTTACCATCCGCAAGCCCGGATTTTGTTAGTGAGCTTT
TTCATCAAAGCTCTTTTCATCATCTGTGAAGTTGCTGTCGCTATTGGATTTGGCGTATGCAAAAGAGCCGGAAGA
AACAGGAACGCAGCTGCTGTTTTAGAATGGGGTAAGTTTTCAGCCCTGTCAGATTGTGCAAGGAAAAGCTAACTT
CAGTAGTTGCCGCTCTTATATTCGCATTCTTTGTTTTTTCTTTCATCATTGATCTCCTGCCGTCCGTTCGTACCA
AGAGACACGTTCCCCAGGGTGAAAAGTATACTCGGCCGGATGTGGAGAATCGACCAGTTGACTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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