Protein ID | Pro_DTO377G3_2|g8353.t1 |
Gene name | |
Location | scaffold_31:249539..252540 |
Strand | - |
Gene length (bp) | 3001 |
Transcript length (bp) | 2838 |
Coding sequence length (bp) | 2838 |
Protein length (aa) | 946 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01602 | Adaptin_N | Adaptin N terminal region | 2.2E-125 | 23 | 572 |
PF02296 | Alpha_adaptin_C | Alpha adaptin AP2, C-terminal domain | 9.7E-42 | 818 | 928 |
PF02883 | Alpha_adaptinC2 | Adaptin C-terminal domain | 1.0E-15 | 708 | 812 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006886 | intracellular protein transport | Yes |
GO:0030131 | clathrin adaptor complex | Yes |
GO:0030117 | membrane coat | Yes |
GO:0016192 | vesicle-mediated transport | Yes |
GO:0044464 | cell part | No |
GO:0044425 | membrane part | No |
GO:0051179 | localization | No |
GO:0098796 | membrane protein complex | No |
GO:0042886 | amide transport | No |
GO:0071702 | organic substance transport | No |
GO:0051641 | cellular localization | No |
GO:0051234 | establishment of localization | No |
GO:0008104 | protein localization | No |
GO:0046907 | intracellular transport | No |
GO:0044444 | cytoplasmic part | No |
GO:0030119 | AP-type membrane coat adaptor complex | No |
GO:0051649 | establishment of localization in cell | No |
GO:0045184 | establishment of protein localization | No |
GO:0071705 | nitrogen compound transport | No |
GO:0015833 | peptide transport | No |
GO:0033036 | macromolecule localization | No |
GO:0005575 | cellular_component | No |
GO:0006810 | transport | No |
GO:0032991 | protein-containing complex | No |
GO:0008150 | biological_process | No |
GO:0015031 | protein transport | No |
GO:0044424 | intracellular part | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8353.t1 MSSMRGLVQFIADLRNARARELEEKRVNKELANIRQKFKSGNLNGYQKKKYVCKLLYVYIQGYDVDFGHLEAVNL ITSPKYSEKQIGYLAVTLFLHEEHELLHLVVNSIRKDLLDHNELNNCLALHAVANVGGKELGEALGSEVHRLLIS PTSKSFVKKKAALTLLRLYRKYPGIVRNEWAERIISIMDDPDMGVTLSVTSLVMALAQDLPEEYKGCYVKAAQRL KRIVVDNDIAPDYLYYRVPCPWIQVKFLRLLQYYPPSEDSHVREIIRESLSQMMQAAMETPKNVQQNNAQNAILF EAINLLIHLDSEHNLMMQISTRLGKYIQSRETNVRYLGLDALTHFAARAETLDPIKKHQNIILGSLRDRDISVRR KGLDLLYSMCDTSNAGPIVNELLRYLQTADYAIREEMVLKVAILTEKYAADAQWYIDMTLKLLSLAGEHVNDEVW QRVIQIVTNNEELQAYAAHTLLGYLKSDCHESLVKIGCYVLGEYGHLIAENAGSSPIEQFLALQAKMFSSSDNAR AMILSSFVKFVNLFPEIKPQLLQIFRLYSHSPDSELQQRAFEYLSLATLPTDDLLRTVCDEMPPFSERTSILLSR LHQKTAGASEKKTWVIGGKDANADKQEMLLAQNTGLKRTFTTIVNGTRTGSGNTPASPASASNAASSSGDLAGLD LSGPTAPAPNMASAAHLTPEWDIGYNRLYFSREGVLFEDAQIQVGLRSEYRGPMGVVKLYISNKSTYPIGSLTTT VDNPASPQLKIDTRNLPEPTVAAAGQTQQTLFCTAHGPFADAPTIRISYLAGALQAYTLQLPVLMHRYMESSSLS AEEFFKRWRQIGGGPLESQKTFALLGKNKTTNERFTRRIVEGFAFKILDGVDPNSQNIVGCAVYQFEGGKTGCLL RLEPNYEKKMYRVTVRATQEEVPGPLVKQMELKLAQGMRADEAFD* |
Coding | >Pro_DTO377G3_2|g8353.t1 ATGTCGTCAATGCGAGGGCTTGTGCAGTTCATTGCTGATCTGCGGAATGCCCGCGCTAGAGAACTCGAGGAGAAG CGCGTGAACAAGGAGCTGGCCAATATCCGGCAGAAGTTTAAGTCTGGCAATCTTAATGGTTATCAGAAAAAGAAA TACGTTTGCAAATTGCTCTATGTCTACATTCAGGGTTACGATGTGGACTTTGGCCATCTCGAGGCTGTTAACTTG ATTACCTCGCCTAAGTACTCTGAGAAGCAGATCGGATACTTGGCTGTCACGTTATTCTTGCATGAGGAGCATGAG CTGCTTCATTTGGTTGTCAACAGTATTCGGAAGGATCTGCTCGATCATAATGAATTGAATAACTGTTTGGCCCTG CATGCTGTGGCCAATGTCGGTGGTAAAGAGCTGGGAGAAGCGCTCGGCTCGGAGGTTCACAGGCTGCTCATCTCA CCTACCTCCAAATCTTTCGTCAAAAAGAAGGCTGCTTTAACGCTGCTTCGGTTGTATCGAAAATACCCCGGCATC GTGCGAAACGAATGGGCCGAACGAATCATATCGATCATGGATGACCCTGATATGGGAGTAACGCTCTCTGTCACC TCTTTGGTCATGGCACTAGCTCAAGACCTGCCAGAGGAATACAAGGGCTGCTATGTCAAGGCTGCACAGCGGTTG AAGCGGATTGTGGTTGACAATGATATTGCTCCGGACTACCTCTACTACCGCGTACCATGTCCATGGATCCAGGTT AAGTTCCTGCGCCTGCTGCAATATTATCCCCCATCAGAGGATAGCCATGTTCGCGAGATTATTCGAGAGTCCCTC TCCCAGATGATGCAAGCTGCAATGGAAACACCCAAGAATGTCCAGCAGAACAATGCGCAAAACGCCATCCTTTTC GAAGCCATCAACCTCCTTATCCACCTCGACTCTGAGCACAATCTCATGATGCAAATCTCCACCCGTCTAGGCAAA TACATTCAGTCTCGGGAGACTAACGTTCGATACCTTGGTCTGGATGCGCTGACCCATTTCGCCGCTCGGGCTGAG ACCCTTGACCCGATTAAAAAGCACCAGAACATTATCCTAGGCTCGCTCCGAGACCGCGACATCAGTGTTCGTCGC AAAGGATTGGACCTGTTGTACAGCATGTGCGATACCAGTAATGCCGGCCCCATTGTTAACGAGCTTCTTCGATAT TTGCAGACTGCCGATTATGCCATTCGAGAGGAAATGGTACTTAAGGTCGCCATTCTTACTGAGAAATACGCCGCC GATGCACAATGGTACATCGATATGACATTGAAACTGCTCTCACTGGCAGGTGAACATGTCAACGACGAAGTATGG CAACGAGTGATTCAGATCGTGACCAACAACGAAGAACTACAAGCTTATGCAGCACACACTCTGCTAGGCTACCTG AAGTCTGATTGCCACGAAAGCTTGGTGAAAATCGGCTGCTATGTCTTGGGCGAGTACGGCCACCTAATCGCCGAA AACGCAGGCTCAAGCCCTATTGAGCAATTCCTGGCTCTGCAGGCCAAAATGTTCTCCAGTTCCGACAACGCGCGG GCGATGATCCTCTCGTCATTTGTCAAGTTTGTGAATTTGTTCCCCGAAATCAAACCCCAGCTCTTGCAAATATTC CGCCTATACAGCCATTCCCCTGATTCCGAACTGCAGCAACGAGCATTTGAGTACCTGTCGCTGGCGACTCTCCCG ACCGACGATCTGCTGCGGACGGTCTGCGATGAGATGCCGCCATTCTCAGAGCGAACCTCTATTCTACTTTCTCGG TTACACCAGAAAACAGCAGGCGCGAGTGAGAAGAAGACCTGGGTTATCGGTGGCAAGGACGCGAATGCGGACAAG CAGGAAATGCTCTTGGCACAGAACACCGGTCTCAAGCGCACCTTCACGACAATCGTCAATGGTACGCGCACTGGG TCCGGCAATACACCAGCCAGCCCGGCAAGCGCGTCGAATGCGGCCAGTTCATCGGGCGACTTGGCAGGCCTCGAT CTCAGCGGTCCCACAGCCCCAGCTCCCAACATGGCCAGTGCTGCTCATCTGACCCCAGAATGGGACATCGGCTAC AACCGACTGTATTTCTCGCGCGAGGGTGTGCTTTTCGAAGATGCACAGATCCAGGTCGGACTGCGCTCGGAGTAC CGCGGTCCTATGGGTGTCGTGAAGCTTTATATCTCGAACAAGTCCACGTACCCCATCGGGTCTCTTACCACCACC GTCGACAACCCGGCCTCTCCTCAGTTGAAGATCGACACGAGGAACCTGCCCGAACCAACAGTCGCGGCTGCCGGG CAGACACAGCAGACTCTGTTCTGCACCGCTCATGGTCCCTTCGCGGATGCGCCTACCATCCGTATCTCATACTTG GCCGGTGCTCTCCAGGCTTACACACTCCAGCTGCCTGTCCTGATGCATCGATACATGGAATCCTCGTCTTTGTCA GCCGAGGAGTTCTTCAAGCGATGGCGCCAGATTGGCGGTGGACCTCTGGAATCCCAGAAGACCTTTGCCTTGCTG GGTAAGAACAAGACTACCAACGAGAGGTTCACTCGGAGGATTGTCGAGGGATTCGCATTCAAGATTTTGGATGGC GTCGATCCGAACTCTCAGAACATTGTTGGGTGCGCCGTGTACCAATTCGAGGGGGGTAAGACGGGCTGTCTGCTG CGGCTGGAGCCCAACTACGAGAAGAAGATGTATCGCGTCACTGTTCGTGCCACCCAAGAAGAGGTCCCCGGGCCA CTGGTCAAACAGATGGAGCTGAAGCTGGCGCAGGGCATGAGAGCAGACGAAGCCTTCGATTAA |
Transcript | >Pro_DTO377G3_2|g8353.t1 ATGTCGTCAATGCGAGGGCTTGTGCAGTTCATTGCTGATCTGCGGAATGCCCGCGCTAGAGAACTCGAGGAGAAG CGCGTGAACAAGGAGCTGGCCAATATCCGGCAGAAGTTTAAGTCTGGCAATCTTAATGGTTATCAGAAAAAGAAA TACGTTTGCAAATTGCTCTATGTCTACATTCAGGGTTACGATGTGGACTTTGGCCATCTCGAGGCTGTTAACTTG ATTACCTCGCCTAAGTACTCTGAGAAGCAGATCGGATACTTGGCTGTCACGTTATTCTTGCATGAGGAGCATGAG CTGCTTCATTTGGTTGTCAACAGTATTCGGAAGGATCTGCTCGATCATAATGAATTGAATAACTGTTTGGCCCTG CATGCTGTGGCCAATGTCGGTGGTAAAGAGCTGGGAGAAGCGCTCGGCTCGGAGGTTCACAGGCTGCTCATCTCA CCTACCTCCAAATCTTTCGTCAAAAAGAAGGCTGCTTTAACGCTGCTTCGGTTGTATCGAAAATACCCCGGCATC GTGCGAAACGAATGGGCCGAACGAATCATATCGATCATGGATGACCCTGATATGGGAGTAACGCTCTCTGTCACC TCTTTGGTCATGGCACTAGCTCAAGACCTGCCAGAGGAATACAAGGGCTGCTATGTCAAGGCTGCACAGCGGTTG AAGCGGATTGTGGTTGACAATGATATTGCTCCGGACTACCTCTACTACCGCGTACCATGTCCATGGATCCAGGTT AAGTTCCTGCGCCTGCTGCAATATTATCCCCCATCAGAGGATAGCCATGTTCGCGAGATTATTCGAGAGTCCCTC TCCCAGATGATGCAAGCTGCAATGGAAACACCCAAGAATGTCCAGCAGAACAATGCGCAAAACGCCATCCTTTTC GAAGCCATCAACCTCCTTATCCACCTCGACTCTGAGCACAATCTCATGATGCAAATCTCCACCCGTCTAGGCAAA TACATTCAGTCTCGGGAGACTAACGTTCGATACCTTGGTCTGGATGCGCTGACCCATTTCGCCGCTCGGGCTGAG ACCCTTGACCCGATTAAAAAGCACCAGAACATTATCCTAGGCTCGCTCCGAGACCGCGACATCAGTGTTCGTCGC AAAGGATTGGACCTGTTGTACAGCATGTGCGATACCAGTAATGCCGGCCCCATTGTTAACGAGCTTCTTCGATAT TTGCAGACTGCCGATTATGCCATTCGAGAGGAAATGGTACTTAAGGTCGCCATTCTTACTGAGAAATACGCCGCC GATGCACAATGGTACATCGATATGACATTGAAACTGCTCTCACTGGCAGGTGAACATGTCAACGACGAAGTATGG CAACGAGTGATTCAGATCGTGACCAACAACGAAGAACTACAAGCTTATGCAGCACACACTCTGCTAGGCTACCTG AAGTCTGATTGCCACGAAAGCTTGGTGAAAATCGGCTGCTATGTCTTGGGCGAGTACGGCCACCTAATCGCCGAA AACGCAGGCTCAAGCCCTATTGAGCAATTCCTGGCTCTGCAGGCCAAAATGTTCTCCAGTTCCGACAACGCGCGG GCGATGATCCTCTCGTCATTTGTCAAGTTTGTGAATTTGTTCCCCGAAATCAAACCCCAGCTCTTGCAAATATTC CGCCTATACAGCCATTCCCCTGATTCCGAACTGCAGCAACGAGCATTTGAGTACCTGTCGCTGGCGACTCTCCCG ACCGACGATCTGCTGCGGACGGTCTGCGATGAGATGCCGCCATTCTCAGAGCGAACCTCTATTCTACTTTCTCGG TTACACCAGAAAACAGCAGGCGCGAGTGAGAAGAAGACCTGGGTTATCGGTGGCAAGGACGCGAATGCGGACAAG CAGGAAATGCTCTTGGCACAGAACACCGGTCTCAAGCGCACCTTCACGACAATCGTCAATGGTACGCGCACTGGG TCCGGCAATACACCAGCCAGCCCGGCAAGCGCGTCGAATGCGGCCAGTTCATCGGGCGACTTGGCAGGCCTCGAT CTCAGCGGTCCCACAGCCCCAGCTCCCAACATGGCCAGTGCTGCTCATCTGACCCCAGAATGGGACATCGGCTAC AACCGACTGTATTTCTCGCGCGAGGGTGTGCTTTTCGAAGATGCACAGATCCAGGTCGGACTGCGCTCGGAGTAC CGCGGTCCTATGGGTGTCGTGAAGCTTTATATCTCGAACAAGTCCACGTACCCCATCGGGTCTCTTACCACCACC GTCGACAACCCGGCCTCTCCTCAGTTGAAGATCGACACGAGGAACCTGCCCGAACCAACAGTCGCGGCTGCCGGG CAGACACAGCAGACTCTGTTCTGCACCGCTCATGGTCCCTTCGCGGATGCGCCTACCATCCGTATCTCATACTTG GCCGGTGCTCTCCAGGCTTACACACTCCAGCTGCCTGTCCTGATGCATCGATACATGGAATCCTCGTCTTTGTCA GCCGAGGAGTTCTTCAAGCGATGGCGCCAGATTGGCGGTGGACCTCTGGAATCCCAGAAGACCTTTGCCTTGCTG GGTAAGAACAAGACTACCAACGAGAGGTTCACTCGGAGGATTGTCGAGGGATTCGCATTCAAGATTTTGGATGGC GTCGATCCGAACTCTCAGAACATTGTTGGGTGCGCCGTGTACCAATTCGAGGGGGGTAAGACGGGCTGTCTGCTG CGGCTGGAGCCCAACTACGAGAAGAAGATGTATCGCGTCACTGTTCGTGCCACCCAAGAAGAGGTCCCCGGGCCA CTGGTCAAACAGATGGAGCTGAAGCTGGCGCAGGGCATGAGAGCAGACGAAGCCTTCGATTAA |
Gene | >Pro_DTO377G3_2|g8353.t1 ATGTCGTCAATGCGAGGGCTTGTGCAGTTCATTGCTGATCTGCGGAATGCCCGCGCTAGAGAACTCGAGGAGAAG CGCGTGAACAAGGAGCTGGCCAATATCCGGCAGAAGTTTAAGTCTGGCAATCTTAATGGTTATCAGAAAAAGAAA TACGTTTGCAAATTGCTCTATGTCTACATTCAGGGTTACGATGTGGACTTTGGCCATCTCGAGGCTGTTAACTTG ATTACCTCGCCTAAGTACTCTGAGAAGCAGATCGGATACTTGGCTGTCACGTTATTCTTGCATGAGGAGCATGAG CTGCTTCATTTGGTTGTCAACAGTATTCGGAAGGATCTGCTCGATCATAATGAATTGAATAACTGTTTGGCCCTG CATGCTGTGGCCAATGTCGGTGGTAAAGAGCTGGGAGAAGCGCTCGGCTCGGAGGTTCACAGGCTGCTCATCTCA CCGTGGGTTTAGAACGGTTTTTGTTCTGTTTATGATTATTCTAACACCTTTTAGTACCTCCAAATCTTTCGTCAA AAAGAAGGCTGCTTTAACGCTGCTTCGGTTGTATCGAAAATACCCCGGCATCGTGCGAAACGAATGGGCCGAACG AATCATATCGATCATGGATGACCCTGATATGGGAGTAACGCTCTCTGTCACCTCTTTGGTCATGGCACTAGCTCA AGACCTGCCAGAGGAATACAAGGGCTGCTATGTCAAGGCTGCACAGCGGTTGAAGCGGATTGTGGTTGACAATGA TATTGCTCCGGACTACCTCTACTACCGCGTACCATGTCCATGGATCCAGGTTAAGTTCCTGCGCCTGCTGCAATA TTATCCCCCATCAGGTATGTTTAGTGCTCTGGCAAATCGTTACTCGGTTTCTCACATACAATTACAGAGGATAGC CATGTTCGCGAGATTATTCGAGAGTCCCTCTCCCAGATGATGCAAGCTGCAATGGAAACACCCAAGAATGTCCAG CAGAACAATGCGCAAAACGCCATCCTTTTCGAAGCCATCAACCTCCTTATCCACCTCGACTCTGAGCACAATCTC ATGATGCAAATCTCCACCCGTCTAGGCAAATACATTCAGTCTCGGGAGACTAACGTTCGATACCTTGGTCTGGAT GCGCTGACCCATTTCGCCGCTCGGGCTGAGACCCTTGACCCGATTAAAAAGCACCAGAACATTATCCTAGGCTCG CTCCGAGACCGCGACATCAGTGTTCGTCGCAAAGGATTGGACCTGTTGTACAGCATGTGCGATACCAGTAATGCC GGCCCCATTGTTAACGAGCTTCTTCGATATTTGCAGACTGCCGATTATGCCATTCGAGAGGAAATGGTACTTAAG GTCGCCATTCTTACTGAGAAATACGCCGCCGATGCACAATGGTACATCGATATGACATTGAAACTGCTCTCACTG GCAGGTGAACATGTCAACGACGAAGTATGGCAACGAGTGATTCAGATCGTGACCAACAACGAAGAACTACAAGCT TATGCAGCACACACTCTGCTAGGCTACCTGAAGTCTGATTGCCACGAAAGCTTGGTGAAAATCGGCTGCTATGTC TTGGGCGAGTACGGCCACCTAATCGCCGAAAACGCAGGCTCAAGCCCTATTGAGCAATTCCTGGCTCTGCAGGCC AAAATGTTCTCCAGTTCCGACAACGCGCGGGCGATGATCCTCTCGTCATTTGTCAAGTTTGTGAATTTGTTCCCC GAAATCAAACCCCAGCTCTTGCAAATATTCCGCCTATACAGCCATTCCCCTGATTCCGAACTGCAGCAACGAGCA TTTGAGTACCTGTCGCTGGCGACTCTCCCGACCGACGATCTGCTGCGGACGGTCTGCGATGAGATGCCGCCATTC TCAGAGCGAACCTCTATTCTACTTTCTCGGTTACACCAGAAAACAGCAGGCGCGAGTGAGAAGAAGACCTGGGTT ATCGGTGGCAAGGACGCGAATGCGGACAAGCAGGAAATGCTCTTGGCACAGAACACCGGTCTCAAGCGCACCTTC ACGACAATCGTCAATGGTACGCGCACTGGGTCCGGCAATACACCAGCCAGCCCGGCAAGCGCGTCGAATGCGGCC AGTTCATCGGGCGACTTGGCAGGCCTCGATCTCAGCGGTCCCACAGCCCCAGCTCCCAACATGGCCAGTGCTGCT CATCTGACCCCAGAATGGGACATCGGCTACAACCGACTGTATTTCTCGCGCGAGGGTGTGCTTTTCGAAGATGCA CAGATCCAGGTCGGACTGCGCTCGGAGTACCGCGGTCCTATGGGTGTCGTGAAGCTTTATATCTCGAACAAGTCC ACGTACCCCATCGGGTCTCTTACCACCACCGTCGACAACCCGGCCTCTCCTCAGTTGAAGATCGACACGAGGAAC CTGCCCGAACCAACAGTCGCGGCTGCCGGGCAGACACAGCAGACTCTGTTCTGCACCGCTCATGGTCCCTTCGCG GATGCGCCTACCATCCGTATCTCATACTTGGCCGGTGCTCTCCAGGCTTACACACTCCAGCTGCCTGTCCTGATG CATCGATACATGGAATCCTCGTCTTTGTCAGCCGAGGAGTTCTTCAAGCGATGGCGCCAGATTGGCGGTGGACCT CTGGAATCCCAGAAGACCTTTGCCTTGCTGGGTAAGAACAAGACTACCAACGAGAGGTTCACTCGGAGGATTGTC GAGGGATTCGCATTCAAGATTTTGGATGGCGTCGATCCGAACTCTCAGAACATTGTTGGGTGCGCCGTGTACCAA TTCGAGGGGGGTAAGACGGGCTGTCTGCTGCGGCTGGAGCCCAACTACGAGAAGAAGGTATGTATCAGAAGTCTT CCAATTCGTTTCGTATTGTCATGCTAACTCTTTCGTTCAGATGTATCGCGTCACTGTTCGTGCCACCCAAGAAGA GGTCCCCGGGCCACTGGTCAAACAGATGGAGCTGAAGCTGGCGCAGGGCATGAGAGCAGACGAAGCCTTCGATTA A |