Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8348.t1
Gene name
Locationscaffold_31:239173..240348
Strand-
Gene length (bp)1175
Transcript length (bp)885
Coding sequence length (bp)885
Protein length (aa) 295

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.7E-42 7 192
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-28 16 189
PF08643 DUF1776 Fungal family of unknown function (DUF1776) 2.6E-05 93 184

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 253 275 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8348.t1
MTDTRRSVLITGCSPGGIGNALAREFNRNGLRVLATAREAATISDLADIGIETLSLTVDDPENVKSCFTEVEKRL
GDKGLDYLVNNAGRNYTVPAMEVELAEVRQTFETNLFAVIAMCQAFLPLLIKAKGTIVQIGSIAGIIPYVFGSVY
NSSKAALHSFSDTLRVELEPFGVHVTTIVTGGVQSRIARTDRSLRPNSLYSPIETEYIARVKHSQHNAMPNDAYA
RSVVSQVLYGSAPWRWLWPWARGRKAWIWEGHASWLIWMLSGGWAWSGLFGRAMTKMFKLWKIKNASAK*
Coding >Pro_DTO377G3_2|g8348.t1
ATGACAGACACTCGCAGATCGGTGCTCATCACGGGATGTTCTCCAGGTGGCATCGGCAACGCTCTTGCGCGCGAG
TTTAATCGAAATGGACTACGCGTGCTAGCCACTGCTCGCGAGGCGGCGACTATTTCTGATCTGGCAGACATCGGC
ATTGAAACCTTGAGTCTTACAGTTGATGACCCGGAGAACGTGAAATCTTGTTTCACAGAGGTTGAGAAGAGACTC
GGAGACAAGGGTCTTGATTATCTCGTTAACAACGCTGGTCGGAATTATACCGTTCCCGCGATGGAAGTAGAGCTT
GCCGAGGTTCGCCAAACGTTCGAGACCAACCTTTTCGCGGTCATTGCTATGTGCCAGGCTTTCCTGCCCTTGCTC
ATCAAGGCGAAAGGTACTATTGTACAGATTGGATCCATTGCCGGGATCATCCCATATGTATTCGGCTCTGTCTAC
AACTCCTCTAAAGCAGCACTACACTCGTTCAGTGACACGCTTCGCGTGGAGCTGGAGCCATTCGGTGTCCACGTC
ACAACGATCGTAACCGGCGGTGTTCAATCGCGTATTGCGCGGACCGACCGATCTCTACGGCCGAATTCCTTATAT
TCCCCCATCGAGACCGAGTATATTGCCCGTGTGAAGCATAGCCAGCACAATGCTATGCCGAATGACGCCTATGCT
CGCAGTGTTGTTTCTCAAGTGTTGTATGGCTCAGCTCCATGGCGCTGGTTGTGGCCATGGGCTCGTGGTCGTAAG
GCCTGGATCTGGGAGGGGCATGCTAGCTGGTTGATTTGGATGTTGTCGGGTGGCTGGGCTTGGTCGGGACTGTTT
GGTCGGGCCATGACTAAAATGTTCAAACTATGGAAGATCAAAAATGCCTCGGCTAAATGA
Transcript >Pro_DTO377G3_2|g8348.t1
ATGACAGACACTCGCAGATCGGTGCTCATCACGGGATGTTCTCCAGGTGGCATCGGCAACGCTCTTGCGCGCGAG
TTTAATCGAAATGGACTACGCGTGCTAGCCACTGCTCGCGAGGCGGCGACTATTTCTGATCTGGCAGACATCGGC
ATTGAAACCTTGAGTCTTACAGTTGATGACCCGGAGAACGTGAAATCTTGTTTCACAGAGGTTGAGAAGAGACTC
GGAGACAAGGGTCTTGATTATCTCGTTAACAACGCTGGTCGGAATTATACCGTTCCCGCGATGGAAGTAGAGCTT
GCCGAGGTTCGCCAAACGTTCGAGACCAACCTTTTCGCGGTCATTGCTATGTGCCAGGCTTTCCTGCCCTTGCTC
ATCAAGGCGAAAGGTACTATTGTACAGATTGGATCCATTGCCGGGATCATCCCATATGTATTCGGCTCTGTCTAC
AACTCCTCTAAAGCAGCACTACACTCGTTCAGTGACACGCTTCGCGTGGAGCTGGAGCCATTCGGTGTCCACGTC
ACAACGATCGTAACCGGCGGTGTTCAATCGCGTATTGCGCGGACCGACCGATCTCTACGGCCGAATTCCTTATAT
TCCCCCATCGAGACCGAGTATATTGCCCGTGTGAAGCATAGCCAGCACAATGCTATGCCGAATGACGCCTATGCT
CGCAGTGTTGTTTCTCAAGTGTTGTATGGCTCAGCTCCATGGCGCTGGTTGTGGCCATGGGCTCGTGGTCGTAAG
GCCTGGATCTGGGAGGGGCATGCTAGCTGGTTGATTTGGATGTTGTCGGGTGGCTGGGCTTGGTCGGGACTGTTT
GGTCGGGCCATGACTAAAATGTTCAAACTATGGAAGATCAAAAATGCCTCGGCTAAATGA
Gene >Pro_DTO377G3_2|g8348.t1
ATGACAGACACTCGCAGATCGGTGCTCATCACGGGGTAAGTTGCAGACTTTAGACAGATACCAACAACAACTTCT
GATATATGCAGTAGATGTTCTCCAGGTGGCATCGGCAACGCTCTTGCGCGCGAGTTTAATCGAAATGGACTACGC
GTGCTAGCCACTGCTCGCGAGGCGGCGACTATTTCTGATCTGGCAGACATCGGCATTGAAACCTTGAGTCTTACA
GTTGATGACCCGGAGAACGTGAAATCTTGTTTCACAGAGGTTGAGAAGAGACTCGGAGACAAGGGTCTTGATTAT
CTCGTTAACAACGCGTGAGTACATGTGGATTTTGTCATTTTATCCGTGAACGATGAGGTACATCTGGCTAATCTC
CCACAGTGGTCGGAGTATGTAACCCCACTCTGCGACTGCTAGAGTCAACCATTTATAGGTACTGATTGCTGCAGA
TTATACCGTTCCCGCGATGGAAGTAGAGCTTGCCGAGGTTCGCCAAACGTTCGAGACCAACCTTTTCGCGGTCAT
TGCTATGTGCCAGGCTTTCCTGCCCTTGCTCATCAAGGCGAAAGGTACTATTGTACAGATTGGATCCATTGCCGG
GGTACGCTTGAGGTATATCCATATCCGGAGATCTGATCGTACTGACATTGACTAGATCATCCCATATGTATTCGG
CTCTGTCTACAACTCCTCTAAAGCAGCACTACACTCGTTCAGTGACACGCTTCGCGTGGAGCTGGAGCCATTCGG
GTTAGATACCACAAGCCCCAAGATCTATGTCGTGTTTTCTAACCAGGATCAACAGTGTCCACGTCACAACGATCG
TAACCGGCGGTGTTCAATCGCGTATTGCGCGGACCGACCGATCTCTACGGCCGAATTCCTTATATTCCCCCATCG
AGACCGAGTATATTGCCCGTGTGAAGCATAGCCAGCACAATGCTATGCCGAATGACGCCTATGCTCGCAGTGTTG
TTTCTCAAGTGTTGTATGGCTCAGCTCCATGGCGCTGGTTGTGGCCATGGGCTCGTGGTCGTAAGGCCTGGATCT
GGGAGGGGCATGCTAGCTGGTTGATTTGGATGTTGTCGGGTGGCTGGGCTTGGTCGGGACTGTTTGGTCGGGCCA
TGACTAAAATGTTCAAACTATGGAAGATCAAAAATGCCTCGGCTAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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