© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g831.t1 |
| Gene name | |
| Location | scaffold_01:2220486..2221806 |
| Strand | + |
| Gene length (bp) | 1320 |
| Transcript length (bp) | 1131 |
| Coding sequence length (bp) | 1131 |
| Protein length (aa) | 377 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-17 | 1 | 342 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.1E-06 | 40 | 130 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.4E-05 | 133 | 212 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 49 | 68 | 19 |
| 3 | 118 | 140 | 22 |
| 4 | 160 | 179 | 19 |
| 5 | 189 | 211 | 22 |
| 6 | 232 | 254 | 22 |
| 7 | 264 | 283 | 19 |
| 8 | 288 | 310 | 22 |
| 9 | 325 | 347 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 6.53 | 2.10 | 10.97 |
| 5d_25C | Five days - 25 degrees Celsius | 7.49 | 2.55 | 12.42 |
| 7d_25C | Seven days - 25 degrees Celsius | 10.46 | 4.10 | 16.83 |
| 10d_25C | Ten days - 25 degrees Celsius | 13.76 | 5.79 | 21.74 |
| 7d_15C | Seven days - 15 degrees Celsius | 10.89 | 4.30 | 17.48 |
| 7d_30C | Seven days - 30 degrees Celsius | 7.80 | 2.69 | 12.92 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.786514 | no |
| 3d_25C | 7d_25C | 0.209425 | no |
| 3d_25C | 7d_15C | 0.165132 | no |
| 3d_25C | 7d_30C | 0.714338 | no |
| 3d_25C | 10d_25C | 0.030434 | yes |
| 5d_25C | 7d_25C | 0.388025 | no |
| 5d_25C | 7d_15C | 0.325602 | no |
| 5d_25C | 7d_30C | 0.942050 | no |
| 5d_25C | 10d_25C | 0.064497 | no |
| 7d_25C | 7d_15C | 0.940654 | no |
| 7d_25C | 7d_30C | 0.467754 | no |
| 7d_25C | 10d_25C | 0.483974 | no |
| 7d_15C | 7d_30C | 0.383092 | no |
| 7d_15C | 10d_25C | 0.558964 | no |
| 7d_30C | 10d_25C | 0.089334 | no |
| Orthofinder run ID | 2 |
| Orthogroup | 183 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g831.t1 MLAVAIPAITDELFGTTLTAFWANISFTVAVVVIQPIYISFSDICGRKIPLYAAFALFGIGSIVFAVAKNMAVLI VGRVLQGLGGGGLDVRGEVIVADITTLQERAVYIGLLSLPMATGCIAGPILGAVFIGIALFLAIFFMRLRPIDQS LRSQLGRIDWLGMPLFTADCVLFALPLSWAGNMYTWGSFRTIVPLIIGVLILVGFAFYEGYQTDAVFRYRSRTAQ MSLLGSFIHGFISILPFCCVVFVFTGIAAFAVDFFRRYIWEIWAGWVFLAVGCGIFSLWDRSSSVAMTAGFQVIA GIGIGTIFSVPPIPMQASAAPDDQGLAMGIMVAFRLFGALIGLAVDATTFSSVFANRISGIDLPASLALLKDPVR P* |
| Coding | >Pro_DTO377G3_2|g831.t1 ATGTTGGCCGTTGCAATCCCGGCCATCACCGATGAACTTTTCGGCACGACCTTGACCGCGTTTTGGGCCAACATC TCCTTCACAGTAGCAGTCGTGGTTATCCAGCCCATCTATATCAGTTTCTCAGATATCTGCGGTCGTAAGATCCCT CTTTACGCGGCTTTTGCCCTTTTCGGTATTGGATCGATTGTCTTTGCCGTCGCGAAAAACATGGCAGTTCTGATT GTGGGACGTGTTCTACAAGGACTGGGCGGAGGCGGACTCGACGTCCGAGGTGAGGTCATTGTCGCCGATATCACT ACTCTGCAAGAGAGGGCTGTGTATATTGGGTTACTGTCGCTTCCAATGGCGACAGGGTGCATCGCGGGTCCTATT CTCGGTGCAGTCTTTATCGGCATTGCCCTCTTCCTGGCTATTTTCTTTATGCGCCTAAGACCAATTGACCAGTCC CTTCGCTCCCAGCTTGGGCGTATCGACTGGCTTGGAATGCCACTATTTACGGCCGATTGTGTTCTGTTCGCCCTA CCACTCAGTTGGGCTGGGAATATGTACACCTGGGGATCGTTTCGAACGATTGTTCCGCTTATCATTGGTGTTTTG ATTTTGGTGGGATTTGCATTTTACGAGGGTTATCAGACCGACGCTGTCTTCCGCTACCGTTCCAGAACGGCACAA ATGTCTCTGCTTGGAAGCTTCATCCATGGCTTCATCTCAATCTTACCATTCTGCTGTGTGGTATTTGTCTTTACC GGAATTGCCGCCTTCGCCGTTGACTTCTTTCGGAGATACATATGGGAGATTTGGGCTGGATGGGTTTTCCTCGCC GTTGGCTGTGGTATCTTCTCACTGTGGGATCGATCTTCTTCAGTAGCCATGACTGCTGGCTTCCAGGTGATTGCG GGGATCGGCATTGGCACAATCTTCAGCGTCCCTCCCATCCCAATGCAAGCCAGCGCTGCACCCGATGACCAGGGT CTCGCAATGGGAATAATGGTCGCGTTCAGGCTATTCGGTGCTCTTATTGGTCTTGCAGTTGATGCCACTACATTC AGCAGTGTCTTCGCCAACAGGATTAGCGGTATCGATTTACCTGCTTCTTTGGCATTGTTGAAAGACCCAGTGAGG CCGTAA |
| Transcript | >Pro_DTO377G3_2|g831.t1 ATGTTGGCCGTTGCAATCCCGGCCATCACCGATGAACTTTTCGGCACGACCTTGACCGCGTTTTGGGCCAACATC TCCTTCACAGTAGCAGTCGTGGTTATCCAGCCCATCTATATCAGTTTCTCAGATATCTGCGGTCGTAAGATCCCT CTTTACGCGGCTTTTGCCCTTTTCGGTATTGGATCGATTGTCTTTGCCGTCGCGAAAAACATGGCAGTTCTGATT GTGGGACGTGTTCTACAAGGACTGGGCGGAGGCGGACTCGACGTCCGAGGTGAGGTCATTGTCGCCGATATCACT ACTCTGCAAGAGAGGGCTGTGTATATTGGGTTACTGTCGCTTCCAATGGCGACAGGGTGCATCGCGGGTCCTATT CTCGGTGCAGTCTTTATCGGCATTGCCCTCTTCCTGGCTATTTTCTTTATGCGCCTAAGACCAATTGACCAGTCC CTTCGCTCCCAGCTTGGGCGTATCGACTGGCTTGGAATGCCACTATTTACGGCCGATTGTGTTCTGTTCGCCCTA CCACTCAGTTGGGCTGGGAATATGTACACCTGGGGATCGTTTCGAACGATTGTTCCGCTTATCATTGGTGTTTTG ATTTTGGTGGGATTTGCATTTTACGAGGGTTATCAGACCGACGCTGTCTTCCGCTACCGTTCCAGAACGGCACAA ATGTCTCTGCTTGGAAGCTTCATCCATGGCTTCATCTCAATCTTACCATTCTGCTGTGTGGTATTTGTCTTTACC GGAATTGCCGCCTTCGCCGTTGACTTCTTTCGGAGATACATATGGGAGATTTGGGCTGGATGGGTTTTCCTCGCC GTTGGCTGTGGTATCTTCTCACTGTGGGATCGATCTTCTTCAGTAGCCATGACTGCTGGCTTCCAGGTGATTGCG GGGATCGGCATTGGCACAATCTTCAGCGTCCCTCCCATCCCAATGCAAGCCAGCGCTGCACCCGATGACCAGGGT CTCGCAATGGGAATAATGGTCGCGTTCAGGCTATTCGGTGCTCTTATTGGTCTTGCAGTTGATGCCACTACATTC AGCAGTGTCTTCGCCAACAGGATTAGCGGTATCGATTTACCTGCTTCTTTGGCATTGTTGAAAGACCCAGTGAGG CCGTAA |
| Gene | >Pro_DTO377G3_2|g831.t1 ATGTTGGCCGTTGCAATCCCGGTAATTCGATAACAACTCCTTCAATTCAAACGGCCATTGAGTTCACCTAACCCT TCCTCTCTATAGGCCATCACCGATGAACTTTTCGGCACGACCTTGACCGCGTTTTGGGCCAACATCTCCTTCACA GTAGCAGTCGTGGTTATCCAGCCCATCTATATCAGTTTCTCAGATATCTGCGGTCGTAAGATCCCTCTTTACGCG GCTTTTGCCCTTTTCGGTATTGGATCGATTGTCTTTGCCGTCGCGAAAAACATGGCAGTTCTGATTGTGGGACGT GTTCTACAAGGACTGGGCGGAGGCGGACTCGACGTCCGAGGTGAGGTCATTGTCGCCGATATCACTACTCTGCAA GAGAGGGCTGTGTATATTGGGTTACTGTCGCTTCCAATGGCGACAGGGTGCATCGCGGGTCCTATTCTCGGTGCA GTCTTTAGTGAGTTTGTTACGTGGAGATGGATCGGCTGGATTAATCTGCCTATAGTCGGCATTGCCCTCTTCCTG GCTATTTTCTTTATGCGCCTAAGACCAATTGACCAGTCCCTTCGCTCCCAGCTTGGGCGTATCGACTGGCTTGGA ATGCCACTATTTACGGCCGATTGTGTTCTGTTCGCCCTACCACTCAGTTGGGCTGGGAATATGTACACCTGGGGA TCGTTTCGAACGATTGTTCCGCTTATCATTGGTGTTTTGATTTTGGTGGGATTTGCATTTTACGAGGGTTATCAG ACCGACGCTGTCTTCCGCTACCGTTCCAGAACGGCACAAATGTCTCTGCTTGGAAGCTTCATCCATGGCTTCGTG CTTTATACTCTTCTGCAATATCTTCCACTGTTTTTCCAAGCGGTCTACCTCGAATCACCGTTGAAATCTTAGATC TCAATCTTACCATTCTGCTGTGTGGTATTTGTCTTTACCGGAATTGCCGCCTTCGCCGTTGACTTCTTTCGGAGA TACATATGGGAGATTTGGGCTGGATGGGTTTTCCTCGCCGTTGGCTGTGGTATCTTCTCACTGTGGGATCGATCT TCTTCAGTAGCCATGACTGCTGGCTTCCAGGTGATTGCGGGGATCGGCATTGGCACAATCTTCAGCGTCCCTCCC ATCCCAATGCAAGCCAGCGCTGCACCCGATGACCAGGGTCTCGCAATGGGAATAATGGTCGCGTTCAGGCTATTC GGTGCTCTTATTGGTCTTGCAGTTGATGCCACTACATTCAGCAGTGTCTTCGCCAACAGGATTAGCGGTATCGAT TTACCTGCTTCTTTGGCATTGTTGAAAGACCCAGTGAGGCCGTAA |