© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g829.t1 |
| Gene name | |
| Location | scaffold_01:2214562..2215543 |
| Strand | - |
| Gene length (bp) | 981 |
| Transcript length (bp) | 981 |
| Coding sequence length (bp) | 981 |
| Protein length (aa) | 327 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 2.0E-10 | 39 | 270 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 3.77 | 0.83 | 6.72 |
| 5d_25C | Five days - 25 degrees Celsius | 3.53 | 0.74 | 6.31 |
| 7d_25C | Seven days - 25 degrees Celsius | 4.44 | 0.94 | 7.94 |
| 10d_25C | Ten days - 25 degrees Celsius | 4.29 | 0.89 | 7.70 |
| 7d_15C | Seven days - 15 degrees Celsius | 2.57 | 0.33 | 4.80 |
| 7d_30C | Seven days - 30 degrees Celsius | 2.94 | 0.43 | 5.44 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.922394 | no |
| 3d_25C | 7d_25C | 0.796006 | no |
| 3d_25C | 7d_15C | 0.482882 | no |
| 3d_25C | 7d_30C | 0.677244 | no |
| 3d_25C | 10d_25C | 0.844954 | no |
| 5d_25C | 7d_25C | 0.690688 | no |
| 5d_25C | 7d_15C | 0.579109 | no |
| 5d_25C | 7d_30C | 0.776093 | no |
| 5d_25C | 10d_25C | 0.742013 | no |
| 7d_25C | 7d_15C | 0.278993 | no |
| 7d_25C | 7d_30C | 0.441107 | no |
| 7d_25C | 10d_25C | 0.962173 | no |
| 7d_15C | 7d_30C | 0.854349 | no |
| 7d_15C | 10d_25C | 0.311439 | no |
| 7d_30C | 10d_25C | 0.485946 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g829.t1 MATKSSDKIFPITTFISDLPTNLILQPLPSSENGSVSGRLIIVGDVHGMEKSLEALLDKVDFDKHKGDHLILVGD LVNKGPDSPGVVDLAMKLGASAVRGNHENAVLIAAAEIKVNATRDTLLHSRGVADDPVVPENPDAELPGNNIRDC EIADKCVPATSHSTASVLSTRHLDWLATLPLILRVKLPHVLTSCFGDILIVVHAGLVPGIPLEDQDPHAVMHMRS LIRKSGDEDVFVPAEIPGEESWVMEWNRCQDRLASKTMVIFGHDAKRQLQLSRYAIGLDSACLYGHQLSAVVIGA SDGRFEHHVVQVECADVPIIPTVSVK* |
| Coding | >Pro_DTO377G3_2|g829.t1 ATGGCCACAAAATCTTCCGACAAGATATTCCCAATCACAACCTTTATTTCAGACCTGCCGACCAACCTTATTCTG CAACCTCTCCCATCATCTGAAAATGGTTCTGTCAGTGGACGTTTGATCATTGTAGGCGATGTGCACGGGATGGAA AAGTCCCTTGAGGCACTCTTAGACAAGGTCGATTTCGACAAACACAAGGGAGATCATCTGATACTAGTTGGCGAC CTCGTCAATAAAGGCCCCGATAGTCCTGGTGTTGTTGATCTGGCCATGAAGCTTGGCGCTAGCGCCGTGAGAGGC AACCACGAAAATGCAGTTCTTATTGCGGCTGCGGAGATCAAGGTCAACGCCACAAGGGATACGCTACTGCACTCT AGGGGCGTGGCTGACGATCCGGTCGTACCTGAAAATCCCGACGCGGAGCTACCCGGAAATAATATCCGAGATTGT GAGATCGCCGACAAATGCGTACCTGCCACATCGCACAGTACGGCCTCGGTACTTTCGACGCGTCATCTCGACTGG CTTGCCACTTTGCCATTGATATTGCGCGTCAAGCTACCTCATGTCCTAACATCCTGCTTCGGTGACATTCTAATT GTCGTACATGCTGGCCTCGTTCCTGGCATCCCACTTGAAGACCAGGATCCACACGCTGTAATGCATATGCGGAGC CTTATCCGTAAATCAGGTGACGAGGATGTATTCGTACCGGCTGAAATTCCCGGAGAAGAAAGCTGGGTTATGGAA TGGAACCGGTGCCAAGATAGGCTAGCATCCAAGACTATGGTGATATTCGGGCATGATGCAAAGCGCCAGTTGCAG CTAAGCAGGTATGCAATTGGACTGGACTCGGCGTGTTTATACGGCCATCAATTAAGTGCGGTTGTAATTGGGGCT TCTGACGGGAGATTTGAGCATCATGTTGTTCAAGTCGAATGTGCTGATGTGCCTATCATTCCAACAGTCTCTGTG AAGTAA |
| Transcript | >Pro_DTO377G3_2|g829.t1 ATGGCCACAAAATCTTCCGACAAGATATTCCCAATCACAACCTTTATTTCAGACCTGCCGACCAACCTTATTCTG CAACCTCTCCCATCATCTGAAAATGGTTCTGTCAGTGGACGTTTGATCATTGTAGGCGATGTGCACGGGATGGAA AAGTCCCTTGAGGCACTCTTAGACAAGGTCGATTTCGACAAACACAAGGGAGATCATCTGATACTAGTTGGCGAC CTCGTCAATAAAGGCCCCGATAGTCCTGGTGTTGTTGATCTGGCCATGAAGCTTGGCGCTAGCGCCGTGAGAGGC AACCACGAAAATGCAGTTCTTATTGCGGCTGCGGAGATCAAGGTCAACGCCACAAGGGATACGCTACTGCACTCT AGGGGCGTGGCTGACGATCCGGTCGTACCTGAAAATCCCGACGCGGAGCTACCCGGAAATAATATCCGAGATTGT GAGATCGCCGACAAATGCGTACCTGCCACATCGCACAGTACGGCCTCGGTACTTTCGACGCGTCATCTCGACTGG CTTGCCACTTTGCCATTGATATTGCGCGTCAAGCTACCTCATGTCCTAACATCCTGCTTCGGTGACATTCTAATT GTCGTACATGCTGGCCTCGTTCCTGGCATCCCACTTGAAGACCAGGATCCACACGCTGTAATGCATATGCGGAGC CTTATCCGTAAATCAGGTGACGAGGATGTATTCGTACCGGCTGAAATTCCCGGAGAAGAAAGCTGGGTTATGGAA TGGAACCGGTGCCAAGATAGGCTAGCATCCAAGACTATGGTGATATTCGGGCATGATGCAAAGCGCCAGTTGCAG CTAAGCAGGTATGCAATTGGACTGGACTCGGCGTGTTTATACGGCCATCAATTAAGTGCGGTTGTAATTGGGGCT TCTGACGGGAGATTTGAGCATCATGTTGTTCAAGTCGAATGTGCTGATGTGCCTATCATTCCAACAGTCTCTGTG AAGTAA |
| Gene | >Pro_DTO377G3_2|g829.t1 ATGGCCACAAAATCTTCCGACAAGATATTCCCAATCACAACCTTTATTTCAGACCTGCCGACCAACCTTATTCTG CAACCTCTCCCATCATCTGAAAATGGTTCTGTCAGTGGACGTTTGATCATTGTAGGCGATGTGCACGGGATGGAA AAGTCCCTTGAGGCACTCTTAGACAAGGTCGATTTCGACAAACACAAGGGAGATCATCTGATACTAGTTGGCGAC CTCGTCAATAAAGGCCCCGATAGTCCTGGTGTTGTTGATCTGGCCATGAAGCTTGGCGCTAGCGCCGTGAGAGGC AACCACGAAAATGCAGTTCTTATTGCGGCTGCGGAGATCAAGGTCAACGCCACAAGGGATACGCTACTGCACTCT AGGGGCGTGGCTGACGATCCGGTCGTACCTGAAAATCCCGACGCGGAGCTACCCGGAAATAATATCCGAGATTGT GAGATCGCCGACAAATGCGTACCTGCCACATCGCACAGTACGGCCTCGGTACTTTCGACGCGTCATCTCGACTGG CTTGCCACTTTGCCATTGATATTGCGCGTCAAGCTACCTCATGTCCTAACATCCTGCTTCGGTGACATTCTAATT GTCGTACATGCTGGCCTCGTTCCTGGCATCCCACTTGAAGACCAGGATCCACACGCTGTAATGCATATGCGGAGC CTTATCCGTAAATCAGGTGACGAGGATGTATTCGTACCGGCTGAAATTCCCGGAGAAGAAAGCTGGGTTATGGAA TGGAACCGGTGCCAAGATAGGCTAGCATCCAAGACTATGGTGATATTCGGGCATGATGCAAAGCGCCAGTTGCAG CTAAGCAGGTATGCAATTGGACTGGACTCGGCGTGTTTATACGGCCATCAATTAAGTGCGGTTGTAATTGGGGCT TCTGACGGGAGATTTGAGCATCATGTTGTTCAAGTCGAATGTGCTGATGTGCCTATCATTCCAACAGTCTCTGTG AAGTAA |