Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g8278.t1
Gene name
Location	scaffold_31:76803..78671
Strand	+
Gene length (bp)	1868
Transcript length (bp)	1620
Coding sequence length (bp)	1620
Protein length (aa)	540

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04042	DNA_pol_E_B	DNA polymerase alpha/epsilon subunit B	7.9E-43	215	470
PF18018	DNA_pol_D_N	DNA polymerase delta subunit OB-fold domain	5.5E-38	50	189

GO

GO Term	Description	Terminal node
GO:0003677	DNA binding	Yes
GO:0006260	DNA replication	Yes
GO:0008152	metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0006259	DNA metabolic process	No
GO:0008150	biological_process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0044238	primary metabolic process	No
GO:0005488	binding	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0009987	cellular process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8278.t1 MVPDAEDYTFLCPPSEEEQEQEPIYRNHSYYGPGYTFHLPAGAGRHYQQQYDDMYFLRLAKLKPAVEQVATDAWD GLIIAGEKVRRVDRVLDVRQGELCWVAGTVYMHLPMKPNILDDLNQENFTSAPPPRLTYTDPSDPSLTQIMMEDE SGRLRLTGKFLQSTQLATGAIIAALGTENADGDFEVIDIKLPDLAPQLQRWGGNAPLAGKEHGKIAFVSGLEITG TSSDTLALELLTDYLLGYTGFSGNAENSPSLGSSKISRLIIAGNSIGANIIEDVAVTSFGDAEAEEAQPRKYGYD CSAYNAAPITELDNFLAEILPSIPITLMPGEKDPANFSLPQQGIHRTMFPQAREYSAPPVRGDEKPEVSWFDSVT NPWDGDVEGWRVWGCSGQNVDDVLRYIPIEGDDSSPEKETDSNARMRIMEAMLRWRCGVPTAPDTIWSYPYQSEE PYVIESCPHIFFAGNQPQFKTTTIEGGVPPRLDGDTEMTGAADSSDTARVRLLALPKFSETGELILVDTETLEVE VVRFGVFNGQEEQK*
Coding	>Pro_DTO377G3_2\|g8278.t1 ATGGTACCGGACGCCGAGGATTACACTTTCTTGTGTCCCCCCAGCGAGGAGGAACAGGAACAAGAGCCAATTTAC CGCAATCACTCCTATTACGGTCCTGGTTATACCTTCCACCTACCAGCTGGCGCAGGACGACACTATCAGCAGCAA TATGACGACATGTACTTTTTGCGACTCGCAAAGTTGAAACCTGCCGTCGAACAAGTCGCGACGGATGCGTGGGAT GGCCTCATTATCGCTGGAGAGAAGGTGCGACGTGTCGACCGAGTCCTCGATGTCCGACAAGGCGAGCTGTGTTGG GTGGCCGGCACCGTATATATGCATTTGCCAATGAAGCCGAATATTTTGGATGATCTCAACCAAGAGAACTTCACT TCTGCGCCCCCTCCCCGCCTCACCTACACCGACCCTTCAGACCCCTCTTTGACCCAAATTATGATGGAAGATGAG TCTGGCCGCTTACGGCTCACCGGAAAATTCCTGCAGTCTACACAGCTGGCGACAGGTGCAATTATCGCGGCTTTG GGCACTGAAAATGCGGATGGAGATTTCGAGGTTATTGATATCAAGCTTCCGGATTTGGCTCCGCAGCTTCAACGA TGGGGGGGCAATGCTCCACTTGCTGGAAAGGAACACGGCAAAATCGCCTTCGTTAGTGGCCTGGAAATCACAGGA ACATCAAGCGACACGCTTGCTTTGGAGCTATTGACGGATTATCTTCTGGGCTACACGGGATTCTCGGGGAACGCC GAAAACAGTCCTTCCTTGGGCTCATCTAAAATCTCCCGCTTGATCATCGCAGGTAATTCAATTGGAGCCAACATA ATTGAAGATGTGGCGGTGACAAGCTTCGGCGATGCTGAGGCAGAGGAAGCCCAGCCAAGAAAGTATGGCTATGAC TGCTCTGCATACAATGCCGCGCCTATCACAGAACTCGATAACTTTCTAGCGGAGATTTTGCCCAGCATTCCTATC ACACTCATGCCGGGCGAAAAAGATCCTGCGAACTTCTCTCTCCCTCAACAGGGGATCCATCGTACTATGTTCCCT CAGGCAAGAGAATATTCCGCACCTCCTGTCAGAGGGGATGAAAAGCCTGAGGTGAGCTGGTTCGACAGTGTCACG AACCCATGGGACGGCGACGTGGAAGGCTGGCGAGTATGGGGATGCAGCGGTCAGAATGTTGACGATGTTCTGCGG TATATCCCTATTGAGGGTGATGATAGCAGCCCAGAAAAGGAGACAGATTCGAATGCTCGGATGCGAATCATGGAA GCTATGCTTCGTTGGCGCTGCGGTGTTCCCACTGCGCCGGACACAATTTGGTCATATCCATACCAATCCGAGGAG CCATATGTCATCGAGTCCTGTCCTCATATTTTTTTCGCTGGCAATCAACCACAGTTCAAGACTACCACGATTGAA GGTGGCGTCCCTCCCCGCCTAGATGGCGACACTGAAATGACGGGTGCCGCTGATTCCTCTGATACAGCCCGTGTT CGGCTGTTGGCACTTCCCAAATTCAGCGAAACTGGGGAGTTAATTCTGGTTGATACCGAAACGCTAGAGGTCGAG GTGGTCCGGTTTGGAGTTTTCAACGGTCAGGAAGAACAAAAATAA
Transcript	>Pro_DTO377G3_2\|g8278.t1 ATGGTACCGGACGCCGAGGATTACACTTTCTTGTGTCCCCCCAGCGAGGAGGAACAGGAACAAGAGCCAATTTAC CGCAATCACTCCTATTACGGTCCTGGTTATACCTTCCACCTACCAGCTGGCGCAGGACGACACTATCAGCAGCAA TATGACGACATGTACTTTTTGCGACTCGCAAAGTTGAAACCTGCCGTCGAACAAGTCGCGACGGATGCGTGGGAT GGCCTCATTATCGCTGGAGAGAAGGTGCGACGTGTCGACCGAGTCCTCGATGTCCGACAAGGCGAGCTGTGTTGG GTGGCCGGCACCGTATATATGCATTTGCCAATGAAGCCGAATATTTTGGATGATCTCAACCAAGAGAACTTCACT TCTGCGCCCCCTCCCCGCCTCACCTACACCGACCCTTCAGACCCCTCTTTGACCCAAATTATGATGGAAGATGAG TCTGGCCGCTTACGGCTCACCGGAAAATTCCTGCAGTCTACACAGCTGGCGACAGGTGCAATTATCGCGGCTTTG GGCACTGAAAATGCGGATGGAGATTTCGAGGTTATTGATATCAAGCTTCCGGATTTGGCTCCGCAGCTTCAACGA TGGGGGGGCAATGCTCCACTTGCTGGAAAGGAACACGGCAAAATCGCCTTCGTTAGTGGCCTGGAAATCACAGGA ACATCAAGCGACACGCTTGCTTTGGAGCTATTGACGGATTATCTTCTGGGCTACACGGGATTCTCGGGGAACGCC GAAAACAGTCCTTCCTTGGGCTCATCTAAAATCTCCCGCTTGATCATCGCAGGTAATTCAATTGGAGCCAACATA ATTGAAGATGTGGCGGTGACAAGCTTCGGCGATGCTGAGGCAGAGGAAGCCCAGCCAAGAAAGTATGGCTATGAC TGCTCTGCATACAATGCCGCGCCTATCACAGAACTCGATAACTTTCTAGCGGAGATTTTGCCCAGCATTCCTATC ACACTCATGCCGGGCGAAAAAGATCCTGCGAACTTCTCTCTCCCTCAACAGGGGATCCATCGTACTATGTTCCCT CAGGCAAGAGAATATTCCGCACCTCCTGTCAGAGGGGATGAAAAGCCTGAGGTGAGCTGGTTCGACAGTGTCACG AACCCATGGGACGGCGACGTGGAAGGCTGGCGAGTATGGGGATGCAGCGGTCAGAATGTTGACGATGTTCTGCGG TATATCCCTATTGAGGGTGATGATAGCAGCCCAGAAAAGGAGACAGATTCGAATGCTCGGATGCGAATCATGGAA GCTATGCTTCGTTGGCGCTGCGGTGTTCCCACTGCGCCGGACACAATTTGGTCATATCCATACCAATCCGAGGAG CCATATGTCATCGAGTCCTGTCCTCATATTTTTTTCGCTGGCAATCAACCACAGTTCAAGACTACCACGATTGAA GGTGGCGTCCCTCCCCGCCTAGATGGCGACACTGAAATGACGGGTGCCGCTGATTCCTCTGATACAGCCCGTGTT CGGCTGTTGGCACTTCCCAAATTCAGCGAAACTGGGGAGTTAATTCTGGTTGATACCGAAACGCTAGAGGTCGAG GTGGTCCGGTTTGGAGTTTTCAACGGTCAGGAAGAACAAAAATAA
Gene	>Pro_DTO377G3_2\|g8278.t1 ATGGTACCGGACGCCGAGGATTACACTTTCTTGTGTCCCCCCAGGTAATACCTCTTAATCCACTCTGCATCCAAG CTGCTACGTTTCGGGGAGCTTTCGCTAACTATCTGCGATAGCGAGGAGGAACAGGAACAAGAGCCAATTTACCGC AATCACTCCTATTACGGTCCTGGTTATACCTTCCACCTACCAGCTGGCGCAGGACGACACTATCAGCAGCAATAT GACGACATGTACTTTTTGCGACTCGCAAAGTTGAAACCTGCCGTCGAACAAGTCGCGACGGATGCGTGGGATGGC CTCATTGTAAGAGCACTCAGTCTTAGGAAATATTTTGCGCTCTCGGCTATGGAATTTCCTAACACCTGCTTGTGA ATTAGATCGCTGGAGAGAAGGTGCGACGTGTCGACCGAGTCCTCGATGTCCGACAAGGCGAGCTGTGTTGGGTGG CCGGCACCGTATATATGCATTTGCCAATGAAGCCGAATATTTTGGATGATCTCAACCAAGAGGTTCGTTTTCTAA CCTTGCTGCTGCTTCTTCCACTGACAACCCATAGAACTTCACTTCTGCGCCCCCTCCCCGCCTCACCTACACCGA CCCTTCAGACCCCTCTTTGACCCAAATTATGATGGAAGATGAGTCTGGCCGCTTACGGCTCACCGGAAAATTCCT GCAGTCTACACAGCTGGCGACAGGTGCAATTATCGCGGCTTTGGGCACTGAAAATGCGGATGGAGATTTCGAGGT TATTGATATCAAGCTTCCGGATTTGGCTCCGCAGCTTCAACGATGGGGGGGCAATGCTCCACTTGCTGGAAAGGA ACACGGCAAAATCGCCTTCGTTAGTGGCCTGGAAATCACAGGAACATCAAGCGACACGCTTGCTTTGGAGCTATT GACGGATTATCTTCTGGGCTACACGGGATTCTCGGGGAACGCCGAAAACAGTCCTTCCTTGGGCTCATCTAAAAT CTCCCGCTTGATCATCGCAGGTAATTCAATTGGAGCCAACATAATTGAAGATGTGGCGGTGACAAGCTTCGGCGA TGCTGAGGCAGAGGAAGCCCAGCCAAGAAAGTATGGCTATGACTGCTCTGCATACAATGCCGCGCCTATCACAGA ACTCGATAACTTTCTAGCGGAGATTTTGCCCAGCATTCCTATCACACTCATGCCGGGCGAAAAAGATCCTGCGAA CTTCTCTCTCCCTCAACAGGGGATCCATCGTACTATGTTCCCTCAGGCAAGAGAATATTCCGCACCTCCTGTCAG AGGGGATGAAAAGCCTGAGGTGAGCTGGTTCGACAGTGTCACGAACCCATGGGACGGCGACGTGGAAGGCTGGCG AGTATGGGGATGCAGCGGTCAGAATGTTGACGATGTTCTGCGGTATATCCCTATTGAGGGTGATGATAGCAGCCC AGAAAAGGAGACAGATTCGAATGCTCGGATGCGAATCATGGAAGCTATGCTTCGTTGGCGCTGCGGTGTTCCCAC TGCGCCGGACACAATTTGTATGCTTGGACACTTGAATCTTTCAGAGAAATTTATGCTAACAATACCCTTTAGGGT CATATCCATACCAATCCGAGGAGCCATATGTCATCGAGTCCTGTCCTCATATTTTTTTCGCTGGCAATCAACCAC AGTTCAAGACTACCACGATTGAAGGTGGCGTCCCTCCCCGCCTAGATGGCGACACTGAAATGACGGGTGCCGCTG ATTCCTCTGATACAGCCCGTGTTCGGCTGTTGGCACTTCCCAAATTCAGCGAAACTGGGGAGTTAATTCTGGTTG ATACCGAAACGCTAGAGGTCGAGGTGGTCCGGTTTGGAGTTTTCAACGGTCAGGAAGAACAAAAATAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences