Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g8260.t1
Gene name
Location	scaffold_30:258482..260781
Strand	+
Gene length (bp)	2299
Transcript length (bp)	2250
Coding sequence length (bp)	2250
Protein length (aa)	750

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05764	YL1	YL1 nuclear protein	6.5E-57	30	261
PF08265	YL1_C	YL1 nuclear protein C-terminal domain	5.8E-12	640	668

GO

GO Term	Description	Terminal node
GO:0043486	histone exchange	Yes
GO:0005634	nucleus	Yes
GO:0006338	chromatin remodeling	Yes
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0005575	cellular_component	No
GO:0043229	intracellular organelle	No
GO:0065007	biological regulation	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0043227	membrane-bounded organelle	No
GO:0050789	regulation of biological process	No
GO:0016043	cellular component organization	No
GO:0010468	regulation of gene expression	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0034728	nucleosome organization	No
GO:0008150	biological_process	No
GO:0043933	protein-containing complex organization	No
GO:0051252	regulation of RNA metabolic process	No
GO:0031323	regulation of cellular metabolic process	No
GO:0071840	cellular component organization or biogenesis	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0006325	chromatin organization	No
GO:0019222	regulation of metabolic process	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0080090	regulation of primary metabolic process	No
GO:0110165	cellular anatomical entity	No
GO:0043226	organelle	No
GO:0009889	regulation of biosynthetic process	No
GO:0050794	regulation of cellular process	No
GO:0009987	cellular process	No
GO:0071824	protein-DNA complex subunit organization	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 58	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
YL1 nuclear protein

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8260.t1 MADIMEEDPSSAVQSSEGEEMPVESLVRGRAKRSTAGLHMSALLEAAADDDLSLLFEEVEDDNEFADVADPDAED ELLESSDEDEDQGPNAQNDYEGEQKLQKDERKKRRAQNDLRFQTLRKRVKIDPTAPSTMSAAPRPKKKSERISWI PTVEDGPTRQSSRRQTMVNKELTHARLKDSQEKRVRIIATMKEAEKRKAHLKPKQMTQEDHLAEAARVERLNSKS LNRWELSEKRKADERRARIEALQNRRLDGPVISYWSGVATWTNGRLTRVGKIDIRPKVDKDELRKKKKEKEDKEK AAAELKALGSTTGTSQPPYFHVVVGPPESLPPSTFTVDQPTGNKPPENAAPTAENTDTAENTNTPLVSGANAGQP DGIPETKTIMETSTEQGKDNAMEKAPSVDANTSVPPEQDQSITAEGQSSESKNYGRLRFAVEIPASHHTSISADN GSIQKSPDVPTKTEDAMDIDSTVAAAAADSTKNQKVLESTDQTSLATPHVAAQPTSAEPIAHAAGTTVPEPPPLD GSRPVESATAVSSEVSLAPQALPAPAATSQATVPENAIVRSLNQPSTLPSESQLSNGLVKEPAPEIPEPPPVIEQ TGRCLTILENFDYATANNRKYSMYFNAKKLGRLTKISSSLCVITSLPSRYRDPETALPYANSYAYSQIRRMLSEG YIWSSMLGCFVGPAEAARGVPERFTGKPGPGTVKLTDEGQAETPGNALTEAPSTPTPAASRAAPPTEPMEIDKA*
Coding	>Pro_DTO377G3_2\|g8260.t1 ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC AACGCCAAAAAGCTCGGCCGTTTGACAAAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTAC CGCGATCCAGAGACCGCTCTCCCTTACGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGG TATATTTGGAGTTCGATGCTGGGATGCTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACA GGCAAGCCGGGACCAGGTACAGTGAAACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAG GCTCCTTCGACACCCACGCCAGCGGCATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA
Transcript	>Pro_DTO377G3_2\|g8260.t1 ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC AACGCCAAAAAGCTCGGCCGTTTGACAAAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTAC CGCGATCCAGAGACCGCTCTCCCTTACGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGG TATATTTGGAGTTCGATGCTGGGATGCTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACA GGCAAGCCGGGACCAGGTACAGTGAAACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAG GCTCCTTCGACACCCACGCCAGCGGCATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA
Gene	>Pro_DTO377G3_2\|g8260.t1 ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC AACGCCAAAAAGCTCGGCCGTTTGACAAGTATGTATCATTTTGAAATTTTAGGAATAAGGCTAACCCTACATAAT AGAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTACCGCGATCCAGAGACCGCTCTCCCTTA CGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGGTATATTTGGAGTTCGATGCTGGGATG CTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACAGGCAAGCCGGGACCAGGTACAGTGAA ACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAGGCTCCTTCGACACCCACGCCAGCGGC ATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences