Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8260.t1
Gene name
Locationscaffold_30:258482..260781
Strand+
Gene length (bp)2299
Transcript length (bp)2250
Coding sequence length (bp)2250
Protein length (aa) 750

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05764 YL1 YL1 nuclear protein 8.1E-57 30 261
PF08265 YL1_C YL1 nuclear protein C-terminal domain 5.8E-12 640 668

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0043486 histone exchange Yes
GO:0006338 chromatin remodeling Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0034728 nucleosome organization No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0050789 regulation of biological process No
GO:0050794 regulation of cellular process No
GO:0044464 cell part No
GO:0043933 protein-containing complex subunit organization No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0065007 biological regulation No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0016043 cellular component organization No
GO:0006325 chromatin organization No
GO:0043227 membrane-bounded organelle No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0031323 regulation of cellular metabolic process No
GO:0071840 cellular component organization or biogenesis No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0019222 regulation of metabolic process No
GO:0044424 intracellular part No
GO:2001141 regulation of RNA biosynthetic process No
GO:0008150 biological_process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0071824 protein-DNA complex subunit organization No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No
GO:0031326 regulation of cellular biosynthetic process No
GO:0043226 organelle No
GO:0043044 ATP-dependent chromatin remodeling No
GO:0009987 cellular process No
GO:0051252 regulation of RNA metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
YL1 nuclear protein

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8260.t1
MADIMEEDPSSAVQSSEGEEMPVESLVRGRAKRSTAGLHMSALLEAAADDDLSLLFEEVEDDNEFADVADPDAED
ELLESSDEDEDQGPNAQNDYEGEQKLQKDERKKRRAQNDLRFQTLRKRVKIDPTAPSTMSAAPRPKKKSERISWI
PTVEDGPTRQSSRRQTMVNKELTHARLKDSQEKRVRIIATMKEAEKRKAHLKPKQMTQEDHLAEAARVERLNSKS
LNRWELSEKRKADERRARIEALQNRRLDGPVISYWSGVATWTNGRLTRVGKIDIRPKVDKDELRKKKKEKEDKEK
AAAELKALGSTTGTSQPPYFHVVVGPPESLPPSTFTVDQPTGNKPPENAAPTAENTDTAENTNTPLVSGANAGQP
DGIPETKTIMETSTEQGKDNAMEKAPSVDANTSVPPEQDQSITAEGQSSESKNYGRLRFAVEIPASHHTSISADN
GSIQKSPDVPTKTEDAMDIDSTVAAAAADSTKNQKVLESTDQTSLATPHVAAQPTSAEPIAHAAGTTVPEPPPLD
GSRPVESATAVSSEVSLAPQALPAPAATSQATVPENAIVRSLNQPSTLPSESQLSNGLVKEPAPEIPEPPPVIEQ
TGRCLTILENFDYATANNRKYSMYFNAKKLGRLTKISSSLCVITSLPSRYRDPETALPYANSYAYSQIRRMLSEG
YIWSSMLGCFVGPAEAARGVPERFTGKPGPGTVKLTDEGQAETPGNALTEAPSTPTPAASRAAPPTEPMEIDKA*
Coding >Pro_DTO377G3_2|g8260.t1
ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA
TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT
GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC
GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA
CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG
ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT
CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT
CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT
TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT
CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT
CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC
AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG
GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG
CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC
CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA
GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT
CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG
TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT
GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA
GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT
GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT
GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT
GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC
GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG
ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC
AACGCCAAAAAGCTCGGCCGTTTGACAAAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTAC
CGCGATCCAGAGACCGCTCTCCCTTACGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGG
TATATTTGGAGTTCGATGCTGGGATGCTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACA
GGCAAGCCGGGACCAGGTACAGTGAAACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAG
GCTCCTTCGACACCCACGCCAGCGGCATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA
Transcript >Pro_DTO377G3_2|g8260.t1
ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA
TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT
GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC
GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA
CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG
ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT
CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT
CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT
TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT
CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT
CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC
AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG
GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG
CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC
CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA
GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT
CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG
TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT
GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA
GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT
GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT
GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT
GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC
GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG
ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC
AACGCCAAAAAGCTCGGCCGTTTGACAAAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTAC
CGCGATCCAGAGACCGCTCTCCCTTACGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGG
TATATTTGGAGTTCGATGCTGGGATGCTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACA
GGCAAGCCGGGACCAGGTACAGTGAAACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAG
GCTCCTTCGACACCCACGCCAGCGGCATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA
Gene >Pro_DTO377G3_2|g8260.t1
ATGGCCGACATAATGGAAGAAGACCCATCGTCTGCGGTCCAGTCTTCGGAGGGAGAGGAGATGCCCGTGGAGTCA
TTGGTCAGAGGACGCGCGAAACGAAGCACCGCAGGACTGCACATGTCGGCCCTCCTTGAAGCCGCTGCCGATGAT
GACTTGTCGCTTCTATTTGAGGAAGTCGAAGACGATAATGAGTTTGCGGATGTGGCCGACCCTGATGCAGAGGAC
GAGTTGCTTGAATCGTCGGACGAGGATGAAGACCAAGGGCCGAACGCGCAGAACGACTACGAGGGCGAACAGAAA
CTACAAAAAGACGAACGCAAGAAGCGCAGAGCCCAGAATGATCTCCGATTCCAGACCTTGCGCAAACGAGTCAAG
ATTGATCCGACCGCTCCGTCCACCATGTCCGCCGCCCCTCGTCCGAAGAAAAAGTCGGAGCGCATCTCGTGGATT
CCCACTGTGGAGGATGGGCCTACTCGGCAATCATCACGTCGACAGACCATGGTCAACAAGGAGCTTACGCATGCT
CGTCTGAAGGACAGCCAGGAAAAACGAGTCCGCATCATCGCTACAATGAAGGAGGCAGAGAAGCGGAAGGCCCAT
TTGAAACCGAAGCAGATGACCCAGGAAGACCATCTTGCGGAGGCAGCAAGAGTAGAGCGGCTCAATAGCAAAAGT
CTCAACCGCTGGGAGCTTTCGGAAAAACGAAAAGCGGACGAAAGACGAGCGAGGATTGAAGCACTACAAAATCGT
CGTCTTGACGGTCCGGTGATTTCCTACTGGAGTGGTGTGGCTACATGGACGAACGGGCGTCTCACCCGGGTGGGC
AAAATCGACATCAGACCGAAGGTAGATAAAGATGAACTGAGGAAGAAAAAGAAAGAGAAGGAAGATAAAGAGAAG
GCTGCGGCAGAGTTGAAGGCACTGGGGTCAACCACAGGCACATCACAACCACCATACTTCCATGTAGTTGTTGGG
CCACCAGAATCTCTACCTCCTTCGACGTTCACCGTGGACCAACCGACTGGAAACAAGCCACCCGAGAATGCTGCC
CCGACCGCAGAGAATACAGACACTGCAGAGAACACAAACACCCCCTTAGTGTCCGGGGCGAATGCTGGCCAACCA
GATGGAATCCCAGAGACGAAGACAATCATGGAAACTTCCACCGAGCAGGGCAAGGACAATGCTATGGAAAAAGCT
CCAAGTGTTGACGCAAATACATCAGTACCTCCTGAGCAAGATCAATCCATCACAGCTGAAGGGCAATCCTCGGAG
TCCAAGAATTATGGGAGATTGAGGTTTGCTGTGGAAATTCCAGCGTCTCATCATACATCGATTTCTGCGGATAAT
GGCTCTATTCAAAAATCGCCTGATGTACCCACCAAAACCGAGGATGCTATGGATATTGATTCAACAGTGGCTGCA
GCGGCTGCAGATTCTACGAAAAATCAAAAAGTTCTAGAATCAACGGACCAAACAAGCTTGGCCACTCCGCACGTT
GCTGCCCAACCGACTTCTGCAGAGCCTATAGCACATGCAGCTGGGACGACTGTGCCAGAACCACCGCCATTGGAT
GGGTCTCGGCCAGTTGAATCGGCCACGGCTGTTAGCTCTGAAGTCTCACTGGCCCCTCAAGCCTTGCCGGCTCCT
GCAGCCACCAGTCAAGCCACGGTGCCCGAAAACGCCATAGTCCGGAGCCTAAACCAACCATCCACATTACCGTCC
GAATCACAATTATCAAATGGATTGGTGAAGGAACCAGCACCAGAGATTCCAGAACCCCCTCCAGTGATTGAGCAG
ACGGGACGCTGTCTTACGATCTTGGAGAACTTTGACTATGCGACCGCCAACAATCGCAAATACAGCATGTACTTC
AACGCCAAAAAGCTCGGCCGTTTGACAAGTATGTATCATTTTGAAATTTTAGGAATAAGGCTAACCCTACATAAT
AGAAATCTCGTCATCTCTATGCGTCATCACTTCATTGCCTTCGCGTTACCGCGATCCAGAGACCGCTCTCCCTTA
CGCCAATTCATATGCATATAGCCAAATCCGCCGTATGCTATCGGAGGGGTATATTTGGAGTTCGATGCTGGGATG
CTTTGTCGGGCCGGCCGAGGCAGCCCGTGGAGTACCCGAGCGGTTTACAGGCAAGCCGGGACCAGGTACAGTGAA
ACTGACCGATGAGGGCCAGGCCGAGACACCAGGGAATGCACTCACCGAGGCTCCTTCGACACCCACGCCAGCGGC
ATCCCGAGCAGCCCCTCCAACGGAGCCGATGGAGATTGACAAAGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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