Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Pro_DTO377G3_2|g8249.t1
Gene name
Location	scaffold_30:236241..238788
Strand	-
Gene length (bp)	2547
Transcript length (bp)	2373
Coding sequence length (bp)	2373
Protein length (aa)	791

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11831	Myb_Cef	pre-mRNA splicing factor component	6.8E-61	419	636
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	9.3E-11	7	52
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	2.9E-09	58	102
PF13921	Myb_DNA-bind_6	Myb-like DNA-binding domain	1.3E-13	9	69
PF13921	Myb_DNA-bind_6	Myb-like DNA-binding domain	1.2E-07	61	104

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 47	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	34.41	20.82	48.01
5d_25C	Five days - 25 degrees Celsius	52.04	31.90	72.17
7d_25C	Seven days - 25 degrees Celsius	59.03	36.05	82.01
10d_25C	Ten days - 25 degrees Celsius	104.96	62.86	147.07
7d_15C	Seven days - 15 degrees Celsius	41.01	24.64	57.39
7d_30C	Seven days - 30 degrees Celsius	58.55	35.64	81.47

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.048064	yes
3d_25C	7d_25C	0.008807	yes
3d_25C	7d_15C	0.498120	no
3d_25C	7d_30C	0.006371	yes
3d_25C	10d_25C	0.000700	yes
5d_25C	7d_25C	0.642759	no
5d_25C	7d_15C	0.314693	no
5d_25C	7d_30C	0.668150	no
5d_25C	10d_25C	0.000700	yes
7d_25C	7d_15C	0.098891	no
7d_25C	7d_30C	0.983056	no
7d_25C	10d_25C	0.003625	yes
7d_15C	7d_30C	0.105414	no
7d_15C	10d_25C	0.000700	yes
7d_30C	10d_25C	0.003625	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g8249.t1 MPVVKGGVWTNIEDEVLRAAVSKYGLNQWARVSSLLARKTPKQCKARWIEWLDPGIRKVEWSREEDEKLLHLAKL MPTQWRTIAPIVGRTATQCLERYQKLLDEAESRENDELGLGGPGEESAAPSADDVRRLRPGELDPDPESKPARPD TIDLDEDEKEMLSEARARLANTQGKKAKRKARERQLEESRRLAVLQKRRELKHAGINVKVVTRKPGQMDYNADIP FEKPAAPGFYDTLEEKDQNERQREAFDPRKQQLANKRKGDQDDDAERKKRKNDKSGTMAASAAAARAGQMQKIRE AEQSSKRRGLNLPAPQVSESEMQDIIKMGMAGDKASQMTADETGTRGLIGNYSTIVGGTPIRTPRAAPEEDRIAN EIKNIRALTETQSSLLGGDNTPLHEGSSSTGFDGIAPRRQAIVTPNPMATPFRQANGMGATPMPGGIGAGATPLR TPRDHLALNREEQGAQLIGSTPRDIKMYENLTRQQVRSKLASLPKPKQAEWELEVPSESAEPTTSMEISEEDAAE RDQRNKEAREKAAKAEFKRQSQVYQRGLPRPAVLDINALLQRASQVTGTIEGLIANEAAILIAHDSRKFPVPDAQ IQGQAPKLSQLDDRFLDAARASIAAEIASTEAQLSEWQEKFDDGWSSARAKSLPGLENYEDDEQDPFQEEQRMIA AFDTVQTSLFDTAERGNKLEKKLSLHYGGYQKRAKTLRSKILEAGAALPAAINELDAFRTLQISEESAVVRRLER LREAVSFVMRREREAQDLYKSRKDELDELLAGTGTVNGWH*
Coding	>Pro_DTO377G3_2|g8249.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGACCAATATTGAGGATGAAGTGCTTCGGGCAGCTGTATCCAAATATGGT CTCAACCAATGGGCTCGAGTCTCCTCCCTGCTCGCACGGAAAACCCCAAAGCAATGCAAGGCGCGATGGATTGAA TGGTTGGATCCGGGCATTCGCAAGGTCGAGTGGTCGCGGGAAGAGGACGAGAAACTGCTCCACCTTGCAAAGCTG ATGCCCACTCAATGGCGCACTATTGCTCCCATCGTCGGGCGCACTGCCACACAATGTCTTGAACGCTACCAAAAG CTGTTGGATGAAGCTGAATCTCGCGAGAATGACGAGCTCGGTCTCGGAGGACCTGGCGAGGAGAGCGCTGCCCCC AGTGCGGACGATGTCCGTCGCCTGCGACCCGGTGAACTCGATCCCGACCCAGAGTCTAAGCCTGCCCGTCCCGAT ACTATCGACCTGGATGAAGATGAGAAAGAAATGCTGAGCGAAGCGCGTGCTCGTCTCGCTAACACACAGGGTAAA AAGGCCAAACGAAAGGCCCGAGAGCGTCAATTAGAAGAGTCACGTCGACTGGCCGTTCTCCAAAAGCGTCGCGAA CTCAAGCATGCCGGTATTAACGTCAAGGTTGTCACGCGGAAGCCCGGTCAGATGGATTACAATGCAGACATTCCA TTCGAAAAGCCAGCTGCTCCTGGATTCTACGATACACTCGAGGAGAAAGACCAGAATGAACGCCAACGAGAAGCG TTCGATCCCCGGAAGCAGCAACTCGCAAATAAGAGAAAGGGAGACCAGGACGACGATGCGGAACGGAAGAAGCGC AAGAACGATAAAAGCGGCACTATGGCCGCCTCTGCTGCAGCTGCACGAGCCGGCCAAATGCAGAAGATTCGCGAG GCCGAACAGAGCAGCAAGCGACGGGGTTTGAACTTGCCAGCACCGCAGGTCAGCGAAAGCGAAATGCAAGATATC ATCAAGATGGGAATGGCTGGGGATAAAGCTAGTCAAATGACCGCCGATGAAACAGGCACTCGGGGGCTTATTGGA AATTACTCGACTATCGTTGGAGGAACTCCTATCAGAACCCCCCGAGCTGCGCCGGAGGAAGATCGCATCGCTAAC GAAATCAAGAACATTCGAGCTTTGACTGAAACTCAGTCTTCCCTCCTGGGAGGGGATAACACACCTCTCCATGAG GGCAGTTCATCAACTGGATTTGATGGCATTGCTCCTCGGCGGCAAGCGATCGTCACTCCCAACCCCATGGCCACG CCATTCCGCCAGGCGAATGGCATGGGTGCGACACCTATGCCCGGTGGTATTGGGGCCGGTGCCACGCCATTGCGC ACCCCACGTGACCATTTAGCTCTGAACCGGGAAGAACAGGGTGCCCAGCTCATTGGCAGCACACCCCGAGACATT AAAATGTACGAGAATCTCACTCGCCAACAGGTGCGCAGCAAGCTGGCCTCGCTCCCCAAGCCCAAACAAGCCGAG TGGGAATTAGAGGTTCCATCCGAATCCGCTGAGCCCACCACATCTATGGAGATCAGCGAAGAAGATGCGGCCGAG CGTGATCAGCGTAACAAAGAGGCACGGGAGAAGGCCGCCAAGGCTGAATTCAAGCGTCAATCACAAGTTTACCAG CGAGGCCTGCCTCGTCCCGCTGTTCTCGATATTAACGCTTTGCTGCAACGTGCGTCCCAGGTCACCGGCACCATC GAAGGCCTGATTGCCAACGAAGCCGCCATTTTGATCGCACATGACTCTCGCAAATTCCCCGTCCCCGACGCGCAG ATTCAAGGCCAAGCACCAAAGTTAAGCCAATTGGACGACCGTTTCTTGGACGCAGCACGAGCTTCTATTGCCGCT GAGATTGCTTCCACCGAAGCACAGCTGTCCGAATGGCAAGAGAAATTCGACGACGGCTGGTCGTCAGCACGCGCC AAGTCTCTGCCTGGCCTTGAGAACTACGAGGATGACGAGCAGGATCCCTTCCAAGAAGAACAACGCATGATCGCG GCCTTTGATACTGTTCAAACTTCCCTCTTTGATACTGCCGAGCGCGGAAACAAGCTCGAGAAGAAGCTGTCTTTG CACTACGGCGGATACCAGAAGCGGGCTAAGACGCTGCGGTCGAAGATCTTGGAGGCTGGTGCTGCTTTGCCCGCC GCTATAAATGAGCTGGACGCTTTCCGTACACTCCAGATATCTGAGGAGTCGGCTGTGGTCCGGCGACTTGAGAGA CTCCGGGAAGCAGTGTCATTTGTTATGCGGCGTGAGCGAGAGGCTCAAGATTTGTACAAGAGCCGAAAAGATGAG CTTGATGAACTTCTTGCCGGGACGGGTACGGTCAATGGATGGCACTAG
Transcript	>Pro_DTO377G3_2|g8249.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGACCAATATTGAGGATGAAGTGCTTCGGGCAGCTGTATCCAAATATGGT CTCAACCAATGGGCTCGAGTCTCCTCCCTGCTCGCACGGAAAACCCCAAAGCAATGCAAGGCGCGATGGATTGAA TGGTTGGATCCGGGCATTCGCAAGGTCGAGTGGTCGCGGGAAGAGGACGAGAAACTGCTCCACCTTGCAAAGCTG ATGCCCACTCAATGGCGCACTATTGCTCCCATCGTCGGGCGCACTGCCACACAATGTCTTGAACGCTACCAAAAG CTGTTGGATGAAGCTGAATCTCGCGAGAATGACGAGCTCGGTCTCGGAGGACCTGGCGAGGAGAGCGCTGCCCCC AGTGCGGACGATGTCCGTCGCCTGCGACCCGGTGAACTCGATCCCGACCCAGAGTCTAAGCCTGCCCGTCCCGAT ACTATCGACCTGGATGAAGATGAGAAAGAAATGCTGAGCGAAGCGCGTGCTCGTCTCGCTAACACACAGGGTAAA AAGGCCAAACGAAAGGCCCGAGAGCGTCAATTAGAAGAGTCACGTCGACTGGCCGTTCTCCAAAAGCGTCGCGAA CTCAAGCATGCCGGTATTAACGTCAAGGTTGTCACGCGGAAGCCCGGTCAGATGGATTACAATGCAGACATTCCA TTCGAAAAGCCAGCTGCTCCTGGATTCTACGATACACTCGAGGAGAAAGACCAGAATGAACGCCAACGAGAAGCG TTCGATCCCCGGAAGCAGCAACTCGCAAATAAGAGAAAGGGAGACCAGGACGACGATGCGGAACGGAAGAAGCGC AAGAACGATAAAAGCGGCACTATGGCCGCCTCTGCTGCAGCTGCACGAGCCGGCCAAATGCAGAAGATTCGCGAG GCCGAACAGAGCAGCAAGCGACGGGGTTTGAACTTGCCAGCACCGCAGGTCAGCGAAAGCGAAATGCAAGATATC ATCAAGATGGGAATGGCTGGGGATAAAGCTAGTCAAATGACCGCCGATGAAACAGGCACTCGGGGGCTTATTGGA AATTACTCGACTATCGTTGGAGGAACTCCTATCAGAACCCCCCGAGCTGCGCCGGAGGAAGATCGCATCGCTAAC GAAATCAAGAACATTCGAGCTTTGACTGAAACTCAGTCTTCCCTCCTGGGAGGGGATAACACACCTCTCCATGAG GGCAGTTCATCAACTGGATTTGATGGCATTGCTCCTCGGCGGCAAGCGATCGTCACTCCCAACCCCATGGCCACG CCATTCCGCCAGGCGAATGGCATGGGTGCGACACCTATGCCCGGTGGTATTGGGGCCGGTGCCACGCCATTGCGC ACCCCACGTGACCATTTAGCTCTGAACCGGGAAGAACAGGGTGCCCAGCTCATTGGCAGCACACCCCGAGACATT AAAATGTACGAGAATCTCACTCGCCAACAGGTGCGCAGCAAGCTGGCCTCGCTCCCCAAGCCCAAACAAGCCGAG TGGGAATTAGAGGTTCCATCCGAATCCGCTGAGCCCACCACATCTATGGAGATCAGCGAAGAAGATGCGGCCGAG CGTGATCAGCGTAACAAAGAGGCACGGGAGAAGGCCGCCAAGGCTGAATTCAAGCGTCAATCACAAGTTTACCAG CGAGGCCTGCCTCGTCCCGCTGTTCTCGATATTAACGCTTTGCTGCAACGTGCGTCCCAGGTCACCGGCACCATC GAAGGCCTGATTGCCAACGAAGCCGCCATTTTGATCGCACATGACTCTCGCAAATTCCCCGTCCCCGACGCGCAG ATTCAAGGCCAAGCACCAAAGTTAAGCCAATTGGACGACCGTTTCTTGGACGCAGCACGAGCTTCTATTGCCGCT GAGATTGCTTCCACCGAAGCACAGCTGTCCGAATGGCAAGAGAAATTCGACGACGGCTGGTCGTCAGCACGCGCC AAGTCTCTGCCTGGCCTTGAGAACTACGAGGATGACGAGCAGGATCCCTTCCAAGAAGAACAACGCATGATCGCG GCCTTTGATACTGTTCAAACTTCCCTCTTTGATACTGCCGAGCGCGGAAACAAGCTCGAGAAGAAGCTGTCTTTG CACTACGGCGGATACCAGAAGCGGGCTAAGACGCTGCGGTCGAAGATCTTGGAGGCTGGTGCTGCTTTGCCCGCC GCTATAAATGAGCTGGACGCTTTCCGTACACTCCAGATATCTGAGGAGTCGGCTGTGGTCCGGCGACTTGAGAGA CTCCGGGAAGCAGTGTCATTTGTTATGCGGCGTGAGCGAGAGGCTCAAGATTTGTACAAGAGCCGAAAAGATGAG CTTGATGAACTTCTTGCCGGGACGGGTACGGTCAATGGATGGCACTAG
Gene	>Pro_DTO377G3_2|g8249.t1 ATGCCTGTCGTCAAAGGAGGTGTCTGGTAAGTGCCACCGTTGGAACTCGCCCTCCAGTTCTCGTCGCTAATATAC TCTTAGGACCAATATTGAGGATGAAGTGCTTCGGGCAGCTGTACGTGATATAACTCACTAGGAACCTCTCTAGCC TACGTTTTATGAGCAAAAACTAACTCAATCGCAGGTATCCAAATATGGTCTCAACCAATGGGCTCGAGTCTCCTC CCTGCTCGCACGGAAAACCCCAAAGCAATGCAAGGCGCGATGGATTGAATGGTTGGATCCGGGCATTCGCAAGGT CGAGTGGTCGCGGGAAGAGGACGAGAAACTGCTCCACCTTGCAAAGCTGATGCCCACTCAATGGCGCACTATTGC TCCCATCGTCGGGCGCACTGCCACACAATGTCTTGAACGCTACCAAAAGCTGTTGGATGAAGCTGAATCTCGCGA GAATGACGAGCTCGGTCTCGGAGGACCTGGCGAGGAGAGCGCTGCCCCCAGTGCGGACGATGTCCGTCGCCTGCG GTACGTTGGTTTTCCTAAAGCTCTGTGTTCGTGTTGCTGATACCTTTTAGACCCGGTGAACTCGATCCCGACCCA GAGTCTAAGCCTGCCCGTCCCGATACTATCGACCTGGATGAAGATGAGAAAGAAATGCTGAGCGAAGCGCGTGCT CGTCTCGCTAACACACAGGGTAAAAAGGCCAAACGAAAGGCCCGAGAGCGTCAATTAGAAGAGTCACGTCGACTG GCCGTTCTCCAAAAGCGTCGCGAACTCAAGCATGCCGGTATTAACGTCAAGGTTGTCACGCGGAAGCCCGGTCAG ATGGATTACAATGCAGACATTCCATTCGAAAAGCCAGCTGCTCCTGGATTCTACGATACACTCGAGGAGAAAGAC CAGAATGAACGCCAACGAGAAGCGTTCGATCCCCGGAAGCAGCAACTCGCAAATAAGAGAAAGGGAGACCAGGAC GACGATGCGGAACGGAAGAAGCGCAAGAACGATAAAAGCGGCACTATGGCCGCCTCTGCTGCAGCTGCACGAGCC GGCCAAATGCAGAAGATTCGCGAGGCCGAACAGAGCAGCAAGCGACGGGGTTTGAACTTGCCAGCACCGCAGGTC AGCGAAAGCGAAATGCAAGATATCATCAAGATGGGAATGGCTGGGGATAAAGCTAGTCAAATGACCGCCGATGAA ACAGGCACTCGGGGGCTTATTGGAAATTACTCGACTATCGTTGGAGGAACTCCTATCAGAACCCCCCGAGCTGCG CCGGAGGAAGATCGCATCGCTAACGAAATCAAGAACATTCGAGCTTTGACTGAAACTCAGTCTTCCCTCCTGGGA GGGGATAACACACCTCTCCATGAGGGCAGTTCATCAACTGGATTTGATGGCATTGCTCCTCGGCGGCAAGCGATC GTCACTCCCAACCCCATGGCCACGCCATTCCGCCAGGCGAATGGCATGGGTGCGACACCTATGCCCGGTGGTATT GGGGCCGGTGCCACGCCATTGCGCACCCCACGTGACCATTTAGCTCTGAACCGGGAAGAACAGGGTGCCCAGCTC ATTGGCAGCACACCCCGAGACATTAAAATGTACGAGAATCTCACTCGCCAACAGGTGCGCAGCAAGCTGGCCTCG CTCCCCAAGCCCAAACAAGCCGAGTGGGAATTAGAGGTTCCATCCGAATCCGCTGAGCCCACCACATCTATGGAG ATCAGCGAAGAAGATGCGGCCGAGCGTGATCAGCGTAACAAAGAGGCACGGGAGAAGGCCGCCAAGGCTGAATTC AAGCGTCAATCACAAGTTTACCAGCGAGGCCTGCCTCGTCCCGCTGTTCTCGATATTAACGCTTTGCTGCAACGT GCGTCCCAGGTCACCGGCACCATCGAAGGCCTGATTGCCAACGAAGCCGCCATTTTGATCGCACATGACTCTCGC AAATTCCCCGTCCCCGACGCGCAGATTCAAGGCCAAGCACCAAAGTTAAGCCAATTGGACGACCGTTTCTTGGAC GCAGCACGAGCTTCTATTGCCGCTGAGATTGCTTCCACCGAAGCACAGCTGTCCGAATGGCAAGAGAAATTCGAC GACGGCTGGTCGTCAGCACGCGCCAAGTCTCTGCCTGGCCTTGAGAACTACGAGGATGACGAGCAGGATCCCTTC CAAGAAGAACAACGCATGATCGCGGCCTTTGATACTGTTCAAACTTCCCTCTTTGATACTGCCGAGCGCGGAAAC AAGCTCGAGAAGAAGCTGTCTTTGCACTACGGCGGATACCAGAAGCGGGCTAAGACGCTGCGGTCGAAGATCTTG GAGGCTGGTGCTGCTTTGCCCGCCGCTATAAATGAGCTGGACGCTTTCCGTACACTCCAGATATCTGAGGAGTCG GCTGTGGTCCGGCGACTTGAGAGACTCCGGGAAGCAGTGTCATTTGTTATGCGGCGTGAGCGAGAGGCTCAAGAT TTGTACAAGAGCCGAAAAGATGAGCTTGATGAACTTCTTGCCGGGACGGGTACGGTCAATGGATGGCACTAG