Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8206.t1
Gene name
Locationscaffold_30:114424..116374
Strand-
Gene length (bp)1950
Transcript length (bp)1836
Coding sequence length (bp)1836
Protein length (aa) 612

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 9.3E-02 53 86
PF00400 WD40 WD domain, G-beta repeat 3.1E-03 188 217
PF00400 WD40 WD domain, G-beta repeat 3.8E-05 232 261
PF00400 WD40 WD domain, G-beta repeat 3.4E-03 531 563
PF12894 ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 2.0E-04 465 545

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8206.t1
MSLTNESIWAASPSTTRGQPTQLSSDAKGERLAYASNKSIFLRSIDDPAVARQYTEHKAQTTVARFSPSGFYVAS
GDAAGIVRVWDCVGEGITKGEYSIVNGRINDLAWDGDSQRIIAVGDGKQRYGHCITWDSGNTVGEIHGHTQQLNT
VSIRQQRPLRAATAGDDKKTVFYHGPPFKFNNGIADKHSNYIYGVAFSPDGSHLVSVGADRKIWLYDGKTGETKG
QIGEGEHTGSIFSVCWAKDSRKFVTASADRTVRIWDVEAGKSTQTWTLGEEGAMAVRDHQVGVVWPPGRTDNLLI
SLSLSGDLNYLVEGTPEPRQVISGHQKSITSLAQTTVDNKETLWTGSFDGRVCNWDVASGKAEEIEGDAHPGYVA
GLATTSEGSGRIYSVGWDDTLRSVDAAAKTYTGSASKLNGQPKGVAAGDTTVLVGEAETVEIFQDGKKTGEYKTD
FTATTVAAHGSQAAVGGENGSVQICAISSSRLSPRADINASRNPISALAFSPDASHLAVGDLRGRVLVFKVADGS
LVTDRWTAHTARITSLAWNEAGSHVVSGSLDTNIFVWSLAKPGDWLELQNAHKEGVHGVGWISGGSKIISAGADA
AVKVWKVDGLQ*
Coding >Pro_DTO377G3_2|g8206.t1
ATGTCACTTACAAATGAGTCCATTTGGGCCGCTAGCCCCTCCACCACCCGCGGCCAGCCCACTCAGCTTTCTTCT
GATGCTAAAGGCGAGCGATTGGCATATGCATCCAACAAATCCATCTTCCTACGTTCGATCGATGACCCCGCAGTC
GCTAGGCAGTACACCGAACACAAGGCGCAGACAACTGTCGCACGCTTCTCCCCCTCCGGCTTCTACGTTGCAAGT
GGTGACGCAGCTGGAATAGTGAGAGTATGGGATTGTGTCGGTGAAGGAATCACCAAGGGTGAATATAGCATTGTT
AATGGTCGAATCAACGATTTGGCCTGGGACGGTGACTCCCAACGCATTATTGCTGTCGGCGATGGTAAGCAGCGA
TATGGACACTGTATCACTTGGGATAGTGGAAATACCGTTGGGGAGATCCACGGCCATACGCAACAGCTCAACACC
GTGTCAATTAGGCAGCAGCGGCCTCTGCGTGCCGCCACTGCTGGTGACGATAAGAAGACGGTATTCTACCATGGA
CCGCCGTTCAAATTCAACAACGGAATTGCTGATAAGCACTCAAACTACATATACGGAGTTGCCTTTAGCCCGGAT
GGTTCGCACTTAGTCAGTGTTGGCGCAGACCGGAAGATCTGGCTCTACGACGGCAAGACGGGCGAGACCAAGGGT
CAGATCGGTGAAGGAGAACACACTGGCAGTATCTTTAGTGTGTGCTGGGCCAAGGATTCTCGAAAGTTCGTTACT
GCCAGCGCAGACCGGACCGTCAGGATCTGGGATGTGGAAGCTGGCAAATCAACCCAGACCTGGACCTTGGGAGAG
GAGGGTGCTATGGCTGTTCGTGACCACCAAGTTGGCGTGGTCTGGCCCCCAGGAAGAACTGATAACCTGCTCATA
AGTTTGTCCCTCAGCGGAGACTTGAACTACCTGGTCGAGGGAACTCCTGAGCCCCGACAGGTTATCTCGGGCCAC
CAGAAGAGCATCACCTCCCTGGCACAGACCACTGTGGATAACAAGGAAACTCTGTGGACAGGCAGCTTTGACGGA
AGAGTCTGCAACTGGGATGTGGCTTCAGGTAAGGCCGAGGAGATTGAAGGAGATGCCCACCCCGGTTACGTCGCC
GGGCTTGCAACCACATCAGAGGGAAGCGGTAGAATTTACAGTGTCGGCTGGGACGACACCCTCCGTTCTGTTGAC
GCTGCTGCTAAAACATATACGGGCAGCGCTTCAAAGCTCAATGGACAGCCAAAGGGTGTTGCGGCTGGTGACACG
ACCGTGCTTGTTGGCGAAGCCGAAACCGTCGAGATTTTCCAAGATGGCAAGAAGACCGGAGAATACAAAACAGAC
TTTACCGCTACAACCGTGGCCGCGCATGGTTCTCAGGCAGCTGTTGGAGGCGAGAATGGATCTGTTCAGATCTGT
GCTATTTCGAGCTCTCGGCTTTCTCCCCGGGCAGACATTAATGCCTCTCGCAATCCAATCTCTGCTCTTGCCTTC
TCCCCAGACGCCTCCCACTTAGCTGTGGGCGACTTGCGGGGACGTGTTCTAGTTTTCAAGGTTGCAGATGGCAGT
CTAGTTACAGACCGTTGGACGGCGCATACTGCACGGATCACCTCACTTGCTTGGAATGAGGCTGGTTCACACGTT
GTGAGTGGATCACTGGACACAAACATCTTTGTTTGGAGCTTGGCTAAGCCAGGCGACTGGCTTGAGCTGCAGAAT
GCTCACAAAGAGGGTGTCCACGGTGTAGGCTGGATTTCAGGAGGCTCCAAGATCATCTCAGCTGGTGCTGATGCA
GCGGTGAAGGTGTGGAAAGTAGATGGGTTGCAATAA
Transcript >Pro_DTO377G3_2|g8206.t1
ATGTCACTTACAAATGAGTCCATTTGGGCCGCTAGCCCCTCCACCACCCGCGGCCAGCCCACTCAGCTTTCTTCT
GATGCTAAAGGCGAGCGATTGGCATATGCATCCAACAAATCCATCTTCCTACGTTCGATCGATGACCCCGCAGTC
GCTAGGCAGTACACCGAACACAAGGCGCAGACAACTGTCGCACGCTTCTCCCCCTCCGGCTTCTACGTTGCAAGT
GGTGACGCAGCTGGAATAGTGAGAGTATGGGATTGTGTCGGTGAAGGAATCACCAAGGGTGAATATAGCATTGTT
AATGGTCGAATCAACGATTTGGCCTGGGACGGTGACTCCCAACGCATTATTGCTGTCGGCGATGGTAAGCAGCGA
TATGGACACTGTATCACTTGGGATAGTGGAAATACCGTTGGGGAGATCCACGGCCATACGCAACAGCTCAACACC
GTGTCAATTAGGCAGCAGCGGCCTCTGCGTGCCGCCACTGCTGGTGACGATAAGAAGACGGTATTCTACCATGGA
CCGCCGTTCAAATTCAACAACGGAATTGCTGATAAGCACTCAAACTACATATACGGAGTTGCCTTTAGCCCGGAT
GGTTCGCACTTAGTCAGTGTTGGCGCAGACCGGAAGATCTGGCTCTACGACGGCAAGACGGGCGAGACCAAGGGT
CAGATCGGTGAAGGAGAACACACTGGCAGTATCTTTAGTGTGTGCTGGGCCAAGGATTCTCGAAAGTTCGTTACT
GCCAGCGCAGACCGGACCGTCAGGATCTGGGATGTGGAAGCTGGCAAATCAACCCAGACCTGGACCTTGGGAGAG
GAGGGTGCTATGGCTGTTCGTGACCACCAAGTTGGCGTGGTCTGGCCCCCAGGAAGAACTGATAACCTGCTCATA
AGTTTGTCCCTCAGCGGAGACTTGAACTACCTGGTCGAGGGAACTCCTGAGCCCCGACAGGTTATCTCGGGCCAC
CAGAAGAGCATCACCTCCCTGGCACAGACCACTGTGGATAACAAGGAAACTCTGTGGACAGGCAGCTTTGACGGA
AGAGTCTGCAACTGGGATGTGGCTTCAGGTAAGGCCGAGGAGATTGAAGGAGATGCCCACCCCGGTTACGTCGCC
GGGCTTGCAACCACATCAGAGGGAAGCGGTAGAATTTACAGTGTCGGCTGGGACGACACCCTCCGTTCTGTTGAC
GCTGCTGCTAAAACATATACGGGCAGCGCTTCAAAGCTCAATGGACAGCCAAAGGGTGTTGCGGCTGGTGACACG
ACCGTGCTTGTTGGCGAAGCCGAAACCGTCGAGATTTTCCAAGATGGCAAGAAGACCGGAGAATACAAAACAGAC
TTTACCGCTACAACCGTGGCCGCGCATGGTTCTCAGGCAGCTGTTGGAGGCGAGAATGGATCTGTTCAGATCTGT
GCTATTTCGAGCTCTCGGCTTTCTCCCCGGGCAGACATTAATGCCTCTCGCAATCCAATCTCTGCTCTTGCCTTC
TCCCCAGACGCCTCCCACTTAGCTGTGGGCGACTTGCGGGGACGTGTTCTAGTTTTCAAGGTTGCAGATGGCAGT
CTAGTTACAGACCGTTGGACGGCGCATACTGCACGGATCACCTCACTTGCTTGGAATGAGGCTGGTTCACACGTT
GTGAGTGGATCACTGGACACAAACATCTTTGTTTGGAGCTTGGCTAAGCCAGGCGACTGGCTTGAGCTGCAGAAT
GCTCACAAAGAGGGTGTCCACGGTGTAGGCTGGATTTCAGGAGGCTCCAAGATCATCTCAGCTGGTGCTGATGCA
GCGGTGAAGGTGTGGAAAGTAGATGGGTTGCAATAA
Gene >Pro_DTO377G3_2|g8206.t1
ATGTCACTTACAAATGGTGAGAACCTGTCACCCTCATATTATATATTATTGTCCTGACATATTCCAAGAGTCCAT
TTGGGCCGCTAGCCCCTCCACCACCCGCGGCCAGCCCACTCAGCTTTCTTCTGATGCTAAAGGCGAGCGATTGGC
ATATGCAGTATGTTATTCTAACAATATCTACAATAGTACACTGCCTCGTCCTGACATCAGCGATTATAGTCCAAC
AAATCCATCTTCCTACGTTCGATCGATGACCCCGCAGTCGCTAGGCAGTACACCGAACACAAGGCGCAGACAACT
GTCGCACGCTTCTCCCCCTCCGGCTTCTACGTTGCAAGTGGTGACGCAGCTGGAATAGTGAGAGTATGGGATTGT
GTCGGTGAAGGAATCACCAAGGGTGAATATAGCATTGTTAATGGTCGAATCAACGATTTGGCCTGGGACGGTGAC
TCCCAACGCATTATTGCTGTCGGCGATGGTAAGCAGCGATATGGACACTGTATCACTTGGGATAGTGGAAATACC
GTTGGGGAGATCCACGGCCATACGCAACAGCTCAACACCGTGTCAATTAGGCAGCAGCGGCCTCTGCGTGCCGCC
ACTGCTGGTGACGATAAGAAGACGGTATTCTACCATGGACCGCCGTTCAAATTCAACAACGGAATTGCTGATAAG
CACTCAAACTACATATACGGAGTTGCCTTTAGCCCGGATGGTTCGCACTTAGTCAGTGTTGGCGCAGACCGGAAG
ATCTGGCTCTACGACGGCAAGACGGGCGAGACCAAGGGTCAGATCGGTGAAGGAGAACACACTGGCAGTATCTTT
AGTGTGTGCTGGGCCAAGGATTCTCGAAAGTTCGTTACTGCCAGCGCAGACCGGACCGTCAGGATCTGGGATGTG
GAAGCTGGCAAATCAACCCAGACCTGGACCTTGGGAGAGGAGGGTGCTATGGCTGTTCGTGACCACCAAGTTGGC
GTGGTCTGGCCCCCAGGAAGAACTGATAACCTGCTCATAAGTTTGTCCCTCAGCGGAGACTTGAACTACCTGGTC
GAGGGAACTCCTGAGCCCCGACAGGTTATCTCGGGCCACCAGAAGAGCATCACCTCCCTGGCACAGACCACTGTG
GATAACAAGGAAACTCTGTGGACAGGCAGCTTTGACGGAAGAGTCTGCAACTGGGATGTGGCTTCAGGTAAGGCC
GAGGAGATTGAAGGAGATGCCCACCCCGGTTACGTCGCCGGGCTTGCAACCACATCAGAGGGAAGCGGTAGAATT
TACAGTGTCGGCTGGGACGACACCCTCCGTTCTGTTGACGCTGCTGCTAAAACATATACGGGCAGCGCTTCAAAG
CTCAATGGACAGCCAAAGGGTGTTGCGGCTGGTGACACGACCGTGCTTGTTGGCGAAGCCGAAACCGTCGAGATT
TTCCAAGATGGCAAGAAGACCGGAGAATACAAAACAGACTTTACCGCTACAACCGTGGCCGCGCATGGTTCTCAG
GCAGCTGTTGGAGGCGAGAATGGATCTGTTCAGATCTGTGCTATTTCGAGCTCTCGGCTTTCTCCCCGGGCAGAC
ATTAATGCCTCTCGCAATCCAATCTCTGCTCTTGCCTTCTCCCCAGACGCCTCCCACTTAGCTGTGGGCGACTTG
CGGGGACGTGTTCTAGTTTTCAAGGTTGCAGATGGCAGTCTAGTTACAGACCGTTGGACGGCGCATACTGCACGG
ATCACCTCACTTGCTTGGAATGAGGCTGGTTCACACGTTGTGAGTGGATCACTGGACACAAACATCTTTGTTTGG
AGCTTGGCTAAGCCAGGCGACTGGCTTGAGCTGCAGAATGCTCACAAAGAGGGTGTCCACGGTGTAGGCTGGATT
TCAGGAGGCTCCAAGATCATCTCAGCTGGTGCTGATGCAGCGGTGAAGGTGTGGAAAGTAGATGGGTTGCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail