© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8195.t1 |
| Gene name | |
| Location | scaffold_30:85273..86315 |
| Strand | + |
| Gene length (bp) | 1042 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01946 | Thi4 | Thi4 family | 3.6E-110 | 54 | 295 |
| PF01266 | DAO | FAD dependent oxidoreductase | 1.5E-07 | 72 | 120 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 2.8E-05 | 75 | 109 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8195.t1 MFEPATVAPTGIKGKVIVPESVTLTGHGQSNLLEQFGNKWDEFKFAPIRESQVSRAMTRRYFQDLDNYAESDVVI VGAGSCGLSTAYVLAKARPDLKIAIIEASVSPGGGAWLGGQLFSAMILRRPADAFLTELGVPFEEEPSNPNFVVV KHASLFTSTLLSKVLAFPNVKLFNATCVEDLITRPDGNDIRLAGVVVNWTLVTLHHDDHSCMDPNTINAPVIVST TGHDGPFGAFCAKRLVSMNAIEKLGGMRGLDMNAAEDAIVKNTREVAKGLIIGGMELSEIDGFNRMGPTFGAMVM SGVKAAEETLRVFDTRKRECAE* |
| Coding | >Pro_DTO377G3_2|g8195.t1 ATGTTTGAGCCTGCTACTGTTGCCCCTACCGGCATCAAGGGCAAGGTCATCGTCCCCGAATCGGTGACACTGACC GGCCATGGCCAGTCAAACCTCCTTGAGCAGTTCGGCAACAAATGGGATGAGTTCAAGTTCGCCCCTATCCGCGAG AGCCAAGTCTCTCGCGCCATGACCCGACGCTACTTCCAGGATCTGGACAACTACGCCGAGAGCGATGTTGTCATC GTCGGCGCTGGTTCCTGTGGTCTGAGTACTGCCTATGTACTCGCCAAGGCCCGTCCAGACCTGAAGATCGCCATC ATTGAGGCCTCTGTTTCGCCCGGTGGCGGTGCCTGGCTAGGTGGTCAGCTATTCAGCGCCATGATCCTCCGTCGC CCCGCAGATGCCTTCCTGACCGAGCTCGGCGTGCCCTTCGAGGAAGAGCCCTCGAACCCGAACTTCGTCGTCGTC AAGCACGCCTCGCTGTTCACGTCGACGCTCCTGTCAAAGGTCCTCGCCTTCCCGAACGTCAAGCTCTTCAACGCG ACCTGCGTTGAGGACCTGATCACCCGTCCCGACGGCAACGACATCCGCCTCGCCGGTGTCGTCGTCAACTGGACT CTCGTCACCCTCCACCACGACGACCACTCCTGCATGGACCCCAACACCATCAATGCCCCGGTTATCGTCAGCACC ACTGGCCACGACGGCCCATTCGGCGCTTTCTGCGCTAAGCGTCTTGTCTCCATGAACGCTATTGAGAAGCTCGGC GGCATGCGTGGCCTTGACATGAATGCGGCCGAGGACGCTATTGTTAAGAACACCCGTGAGGTCGCTAAGGGCCTT ATCATTGGTGGTATGGAGCTGTCGGAGATCGACGGCTTCAACCGTATGGGCCCTACTTTCGGCGCTATGGTTATG AGTGGTGTTAAGGCTGCTGAGGAGACTCTGCGTGTCTTTGACACCCGCAAGCGCGAGTGTGCTGAGTAA |
| Transcript | >Pro_DTO377G3_2|g8195.t1 ATGTTTGAGCCTGCTACTGTTGCCCCTACCGGCATCAAGGGCAAGGTCATCGTCCCCGAATCGGTGACACTGACC GGCCATGGCCAGTCAAACCTCCTTGAGCAGTTCGGCAACAAATGGGATGAGTTCAAGTTCGCCCCTATCCGCGAG AGCCAAGTCTCTCGCGCCATGACCCGACGCTACTTCCAGGATCTGGACAACTACGCCGAGAGCGATGTTGTCATC GTCGGCGCTGGTTCCTGTGGTCTGAGTACTGCCTATGTACTCGCCAAGGCCCGTCCAGACCTGAAGATCGCCATC ATTGAGGCCTCTGTTTCGCCCGGTGGCGGTGCCTGGCTAGGTGGTCAGCTATTCAGCGCCATGATCCTCCGTCGC CCCGCAGATGCCTTCCTGACCGAGCTCGGCGTGCCCTTCGAGGAAGAGCCCTCGAACCCGAACTTCGTCGTCGTC AAGCACGCCTCGCTGTTCACGTCGACGCTCCTGTCAAAGGTCCTCGCCTTCCCGAACGTCAAGCTCTTCAACGCG ACCTGCGTTGAGGACCTGATCACCCGTCCCGACGGCAACGACATCCGCCTCGCCGGTGTCGTCGTCAACTGGACT CTCGTCACCCTCCACCACGACGACCACTCCTGCATGGACCCCAACACCATCAATGCCCCGGTTATCGTCAGCACC ACTGGCCACGACGGCCCATTCGGCGCTTTCTGCGCTAAGCGTCTTGTCTCCATGAACGCTATTGAGAAGCTCGGC GGCATGCGTGGCCTTGACATGAATGCGGCCGAGGACGCTATTGTTAAGAACACCCGTGAGGTCGCTAAGGGCCTT ATCATTGGTGGTATGGAGCTGTCGGAGATCGACGGCTTCAACCGTATGGGCCCTACTTTCGGCGCTATGGTTATG AGTGGTGTTAAGGCTGCTGAGGAGACTCTGCGTGTCTTTGACACCCGCAAGCGCGAGTGTGCTGAGTAA |
| Gene | >Pro_DTO377G3_2|g8195.t1 ATGTTTGAGCCTGCTACTGTTGCCCCTACCGGCATCAAGGGCAAGGTCATCGTCCCCGAATCGGTGACACTGACC GGCCATGGCCAGTCAAACCTCCTTGAGCAGTTCGGCAACAAATGGGATGAGTTCAAGTTCGCCCCTATCCGCGAG AGCCAAGTCTCTCGCGCCATGACCCGACGCTACTTCCAGGATCTGGACAACTACGCCGAGAGCGATGTTGTCATC GTCGGCGCTGGTTCCTGTGGTCTGAGTACTGCCTATGTACTCGCCAAGGCCCGTCCAGACCTGAAGATCGCCATC ATTGAGGCCTCTGTTTCGCCCGGTTAGTCTCGGCTCCACACGAGCAGACTCTCTCGTAGACCTACCACAGCACCA CTAACACACATATCATATAGGTGGCGGTGCCTGGCTAGGTGGTCAGCTATTCAGCGCCATGATCCTCCGTCGCCC CGCAGATGCCTTCCTGACCGAGCTCGGCGTGCCCTTCGAGGAAGAGCCCTCGAACCCGAACTTCGTCGTCGTCAA GCACGCCTCGCTGTTCACGTCGACGCTCCTGTCAAAGGTCCTCGCCTTCCCGAACGTCAAGCTCTTCAACGCGAC CTGCGTTGAGGACCTGATCACCCGTCCCGACGGCAACGACATCCGCCTCGCCGGTGTCGTCGTCAACTGGACTCT CGTCACCCTCCACCACGACGACCACTCCTGCATGGACCCCAACACCATCAATGCCCCGGTTATCGTCAGCACCAC TGGCCACGACGGCCCATTCGGCGCTTTCTGCGCTAAGCGTCTTGTCTCCATGAACGCTATTGAGAAGCTCGGCGG CATGCGTGGCCTTGACATGAATGCGGCCGAGGACGCTATTGTTAAGAACACCCGTGAGGTCGCTAAGGGCCTTAT CATTGGTGGTATGGAGCTGTCGGAGATCGACGGCTTCAACCGTATGGGCCCTACTTTCGGCGCTATGGTTATGAG TGGTGTTAAGGCTGCTGAGGAGACTCTGCGTGTCTTTGACACCCGCAAGCGCGAGTGTGCTGAGTAA |