© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8177.t1 |
| Gene name | |
| Location | scaffold_30:37679..39239 |
| Strand | - |
| Gene length (bp) | 1560 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.2E-100 | 20 | 474 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.3E-16 | 61 | 225 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.0E-08 | 281 | 462 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 28 | 19 |
| 2 | 67 | 89 | 22 |
| 3 | 96 | 115 | 19 |
| 4 | 120 | 142 | 22 |
| 5 | 155 | 177 | 22 |
| 6 | 187 | 206 | 19 |
| 7 | 277 | 299 | 22 |
| 8 | 314 | 336 | 22 |
| 9 | 343 | 361 | 18 |
| 10 | 376 | 398 | 22 |
| 11 | 419 | 436 | 17 |
| 12 | 440 | 459 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8177.t1 MVSLFRGKALSVAQALLIVAPAFIVFGYNQSGLGPLATLQSWVEVFPKIDTINTSGAQRAQNSTGKGAVIGSFQL GALFGALSCTFLGDRLGRRKTIFLGGLLTIIGQVLQTAAYGLPQFVIGRIILGLGVGQMSVAVPVWQSECTSAKH RGQHVVVDGICICLGYVLCNWIDFGLSKITGALQWRIPLAVSIFFSVVVVFSIFLLPESPRWLVRVGRIDEATSS LAAYKGLPDDDEAVHMEIAGIEASLESTVNSASIMEIFTSSKADDERLIYRFCLCVALQFFQQMCGGNLISTYVS TIFEENLNMSSDLARILSSCAMTWKFICSFISFFAIDRLGRRKIFIISGTGMSVCMTVLTITNSFQDNKTASIIS AVFIFLFNSFYPVGFLGGNFLYCTEVAPMRLRVAMSAISTGNHWLWNFVVVMVTPVALDTIGYKYYIIYAVISAC IPVSVYFFYPETMNRNLESLNHVFRDAPTAWDIVSMARHLPQGEAAEVDVWTGTDEKGEKSEIEQKENA* |
| Coding | >Pro_DTO377G3_2|g8177.t1 ATGGTCTCATTATTCCGAGGAAAAGCGCTGAGCGTAGCGCAGGCGTTGCTCATTGTAGCACCGGCCTTCATCGTC TTCGGTTACAACCAGTCTGGCTTGGGCCCTCTTGCTACATTGCAGAGCTGGGTCGAAGTATTCCCCAAAATCGAC ACAATCAACACATCGGGCGCCCAACGCGCGCAAAACTCCACAGGCAAGGGTGCCGTCATCGGATCCTTCCAGCTC GGTGCTCTGTTCGGAGCCTTGTCGTGTACATTCCTGGGTGACCGCCTCGGTCGCCGCAAGACCATCTTCTTGGGT GGTCTCCTTACTATCATCGGCCAAGTGTTGCAGACTGCGGCTTATGGCTTGCCACAATTCGTCATCGGCCGTATC ATCCTTGGTCTCGGTGTCGGTCAGATGAGTGTTGCCGTTCCCGTGTGGCAGTCCGAGTGCACGTCAGCCAAACAT CGTGGACAGCACGTTGTCGTCGACGGTATCTGTATCTGCTTGGGTTATGTTCTTTGTAACTGGATTGATTTTGGC TTGAGCAAAATTACCGGCGCATTGCAGTGGCGTATTCCATTGGCCGTTTCCATCTTCTTCTCCGTCGTCGTCGTG TTTTCGATCTTCTTGCTCCCCGAGTCACCTCGATGGCTCGTGCGGGTTGGCCGTATCGATGAGGCTACCAGCAGT CTCGCTGCCTACAAGGGTCTACCTGACGATGATGAGGCTGTCCACATGGAAATCGCCGGTATCGAAGCTTCTCTT GAGAGTACGGTTAACAGCGCCTCCATCATGGAGATCTTCACATCCAGCAAGGCCGACGATGAGCGCCTTATCTAC CGGTTCTGTCTATGCGTTGCACTGCAATTCTTCCAGCAGATGTGCGGTGGTAACTTAATCTCGACATACGTGTCG ACAATCTTCGAAGAGAACCTCAACATGTCCAGCGACCTGGCTCGCATCCTGTCTTCATGTGCCATGACCTGGAAG TTCATCTGCAGCTTCATCTCCTTCTTCGCCATCGACCGACTCGGCCGTCGAAAGATCTTCATTATCAGCGGTACT GGTATGTCCGTCTGCATGACGGTCCTCACCATCACCAACAGCTTCCAGGACAACAAAACCGCATCCATTATTTCG GCCGTCTTTATCTTCCTTTTCAACTCGTTCTACCCTGTCGGCTTCCTTGGCGGCAACTTCCTTTACTGTACCGAA GTCGCTCCCATGCGTCTCCGTGTCGCCATGTCCGCCATCTCGACCGGAAACCACTGGCTGTGGAACTTCGTCGTT GTCATGGTCACTCCCGTCGCACTCGACACCATCGGATACAAGTACTACATTATCTACGCTGTCATCTCTGCCTGC ATTCCAGTCTCGGTTTACTTCTTCTACCCCGAGACAATGAACCGCAACCTGGAGTCCCTGAACCATGTCTTCCGC GATGCTCCGACCGCGTGGGATATTGTCTCCATGGCTCGTCACCTGCCTCAAGGCGAGGCTGCTGAGGTGGATGTG TGGACCGGGACCGATGAAAAGGGCGAGAAGAGTGAAATTGAGCAGAAGGAGAATGCTTGA |
| Transcript | >Pro_DTO377G3_2|g8177.t1 ATGGTCTCATTATTCCGAGGAAAAGCGCTGAGCGTAGCGCAGGCGTTGCTCATTGTAGCACCGGCCTTCATCGTC TTCGGTTACAACCAGTCTGGCTTGGGCCCTCTTGCTACATTGCAGAGCTGGGTCGAAGTATTCCCCAAAATCGAC ACAATCAACACATCGGGCGCCCAACGCGCGCAAAACTCCACAGGCAAGGGTGCCGTCATCGGATCCTTCCAGCTC GGTGCTCTGTTCGGAGCCTTGTCGTGTACATTCCTGGGTGACCGCCTCGGTCGCCGCAAGACCATCTTCTTGGGT GGTCTCCTTACTATCATCGGCCAAGTGTTGCAGACTGCGGCTTATGGCTTGCCACAATTCGTCATCGGCCGTATC ATCCTTGGTCTCGGTGTCGGTCAGATGAGTGTTGCCGTTCCCGTGTGGCAGTCCGAGTGCACGTCAGCCAAACAT CGTGGACAGCACGTTGTCGTCGACGGTATCTGTATCTGCTTGGGTTATGTTCTTTGTAACTGGATTGATTTTGGC TTGAGCAAAATTACCGGCGCATTGCAGTGGCGTATTCCATTGGCCGTTTCCATCTTCTTCTCCGTCGTCGTCGTG TTTTCGATCTTCTTGCTCCCCGAGTCACCTCGATGGCTCGTGCGGGTTGGCCGTATCGATGAGGCTACCAGCAGT CTCGCTGCCTACAAGGGTCTACCTGACGATGATGAGGCTGTCCACATGGAAATCGCCGGTATCGAAGCTTCTCTT GAGAGTACGGTTAACAGCGCCTCCATCATGGAGATCTTCACATCCAGCAAGGCCGACGATGAGCGCCTTATCTAC CGGTTCTGTCTATGCGTTGCACTGCAATTCTTCCAGCAGATGTGCGGTGGTAACTTAATCTCGACATACGTGTCG ACAATCTTCGAAGAGAACCTCAACATGTCCAGCGACCTGGCTCGCATCCTGTCTTCATGTGCCATGACCTGGAAG TTCATCTGCAGCTTCATCTCCTTCTTCGCCATCGACCGACTCGGCCGTCGAAAGATCTTCATTATCAGCGGTACT GGTATGTCCGTCTGCATGACGGTCCTCACCATCACCAACAGCTTCCAGGACAACAAAACCGCATCCATTATTTCG GCCGTCTTTATCTTCCTTTTCAACTCGTTCTACCCTGTCGGCTTCCTTGGCGGCAACTTCCTTTACTGTACCGAA GTCGCTCCCATGCGTCTCCGTGTCGCCATGTCCGCCATCTCGACCGGAAACCACTGGCTGTGGAACTTCGTCGTT GTCATGGTCACTCCCGTCGCACTCGACACCATCGGATACAAGTACTACATTATCTACGCTGTCATCTCTGCCTGC ATTCCAGTCTCGGTTTACTTCTTCTACCCCGAGACAATGAACCGCAACCTGGAGTCCCTGAACCATGTCTTCCGC GATGCTCCGACCGCGTGGGATATTGTCTCCATGGCTCGTCACCTGCCTCAAGGCGAGGCTGCTGAGGTGGATGTG TGGACCGGGACCGATGAAAAGGGCGAGAAGAGTGAAATTGAGCAGAAGGAGAATGCTTGA |
| Gene | >Pro_DTO377G3_2|g8177.t1 ATGGTCTCATTATTCCGAGGAAAAGCGCTGAGCGTAGCGCAGGCGTTGCTCATTGTAGCACCGGCCTTCATCGTC TTCGGTTACAACCAGTCTGGCTTGGGCCCTCTTGCTACATTGCAGAGCTGGGTCGAAGTATTCCCCAAAATCGAC ACAATCAACACATCGGGCGCCCAACGCGCGCAAAACTCCACAGGCAAGGGTGCCGTCATCGGATCCTTCCAGCTC GGTGCTCTGTTCGGAGCCTTGTCGTGTACATTCCTGGGTGACCGCCTCGGTCGCCGCAAGACCATCTTCTTGGGT GGTCTCCTTACTATCATCGGCCAAGTGTTGCAGACTGCGGCTTATGGCTTGCCACAATTCGTCATCGGCCGTATC ATCCTTGGTCTCGGTGTCGGTCAGATGAGTGTTGCCGTTCCCGTGTGGCAGTCCGAGTGCACGTCAGCCAAACAT CGTGGACAGCACGTTGTCGTCGACGGTATCTGTATCTGCTTGGGTTATGTTCTTTGTAACTGGATTGATTTTGGC TTGAGCAAAATTACCGGCGCATTGCAGTGGCGTATTCCATTGGCCGTTTCCATCTTCTTCTCCGTCGTCGTCGTG TTTTCGATCTTCTTGCTCCCCGAGTCACCTCGATGGCTCGTGCGGGTTGGCCGTATCGATGAGGCTACCAGCAGT CTCGCTGCCTACAAGGGTCTACCTGACGATGATGAGGCTGTCCACATGGAAATCGCCGGTATCGAAGCTTCTCTT GAGAGTACGGTTAACAGCGCCTCCATCATGGAGATCTTCACATCCAGCAAGGCCGACGATGAGCGCCTTATCTAC CGGTTCTGTCTATGCGTTGCACTGCAATTCTTCCAGCAGATGTGCGGTGGTAACTTAATCTCGACATACGTGTCG ACAATCTTCGAAGAGAACCTCAACATGTCCAGCGACCTGGCTCGCATCCTGTCTTCATGTGCCATGACCTGGAAG TTCATCTGCAGCTTCATCTCCTTCTTCGCCATCGACCGACTCGGCCGTCGAAAGATCTTCATTATCAGCGGTACT GGTATGTCCGTCTGCATGACGGTCCTCACCATCACCAACAGCTTCCAGGACAACAAAACCGCATCCATTATTTCG GCCGTCTTTATCTTCCTTTTCAACTCGTTCTACCCTGTCGGCTTCCTTGGCGGCAACTTCCTTTACTGTACCGAA GTCGCTCCCATGCGTCTCCGTGTCGCCATGTCCGCCATCTCGACCGGAAACCACTGGCTGTGGAACTTCGTCGTT GTCATGGTCACTCCCGTCGCACTCGACACCATCGGATACAAGTACTACATTATCTACGCTGTCATCTCTGCCTGC ATTCCAGTCTCGGTTTACTTCTTCTACCCCGAGACAATGAACCGCAACCTGGAGTCCCTGAACCATGTCTTCCGC GATGCTCCGACCGCGTGGGATATTGTCTCCATGGCTCGTCACCTGCCTCAAGGCGAGGCTGCTGAGGTGGATGTG TGGACCGGGACCGATGAAAAGGGCGAGAAGAGTGAAATTGAGCAGAAGGAGAATGCTTGA |