Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8174.t1
Gene name
Locationscaffold_30:30166..31826
Strand+
Gene length (bp)1660
Transcript length (bp)576
Coding sequence length (bp)576
Protein length (aa) 192

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 68 90 22
4 105 127 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8174.t1
MRFFKTAVLVAALFATTVIAGMEQLAAVLPSCAGWSSAVLNMVLDIIVMALPLRQLYGLNLSMKRKSFVICMFSL
GIFVTLVSILRLNSLIHFASTTNLTWDYVAIGYWSTIECDVGVICACLPAIRSLLRRISPRFFGDTEQAKSSSYA
MNSRSRGTSGPVQNKSSDGPFYQFDDLDLSDEARLHHPQPV*
Coding >Pro_DTO377G3_2|g8174.t1
ATGCGTTTTTTCAAAACAGCAGTCCTTGTGGCCGCCCTGTTCGCAACGACTGTGATAGCAGGAATGGAACAGTTG
GCGGCCGTTTTACCCTCATGTGCGGGCTGGTCATCGGCAGTGCTTAACATGGTTCTCGATATAATTGTCATGGCA
CTCCCTCTACGACAGCTATACGGTTTGAACCTTTCCATGAAACGGAAATCATTCGTAATTTGCATGTTCAGCCTG
GGCATATTTGTCACCCTTGTCAGCATCCTGCGGCTGAATTCACTCATTCACTTTGCCTCTACCACTAACCTTACA
TGGGATTACGTGGCTATAGGGTATTGGAGTACTATTGAATGTGACGTTGGCGTTATATGTGCGTGTCTGCCCGCT
ATTCGATCTCTACTACGTCGTATATCTCCCCGATTTTTTGGAGATACCGAGCAAGCCAAATCATCATCATACGCT
ATGAACTCGCGTTCTCGTGGGACTTCTGGCCCTGTCCAGAACAAGAGTAGTGATGGCCCATTCTACCAGTTTGAT
GACTTGGACCTTTCTGATGAAGCCCGACTACACCATCCACAACCAGTGTAG
Transcript >Pro_DTO377G3_2|g8174.t1
ATGCGTTTTTTCAAAACAGCAGTCCTTGTGGCCGCCCTGTTCGCAACGACTGTGATAGCAGGAATGGAACAGTTG
GCGGCCGTTTTACCCTCATGTGCGGGCTGGTCATCGGCAGTGCTTAACATGGTTCTCGATATAATTGTCATGGCA
CTCCCTCTACGACAGCTATACGGTTTGAACCTTTCCATGAAACGGAAATCATTCGTAATTTGCATGTTCAGCCTG
GGCATATTTGTCACCCTTGTCAGCATCCTGCGGCTGAATTCACTCATTCACTTTGCCTCTACCACTAACCTTACA
TGGGATTACGTGGCTATAGGGTATTGGAGTACTATTGAATGTGACGTTGGCGTTATATGTGCGTGTCTGCCCGCT
ATTCGATCTCTACTACGTCGTATATCTCCCCGATTTTTTGGAGATACCGAGCAAGCCAAATCATCATCATACGCT
ATGAACTCGCGTTCTCGTGGGACTTCTGGCCCTGTCCAGAACAAGAGTAGTGATGGCCCATTCTACCAGTTTGAT
GACTTGGACCTTTCTGATGAAGCCCGACTACACCATCCACAACCAGTGTAG
Gene >Pro_DTO377G3_2|g8174.t1
ATGCGTTTTTTCAAAACAGCAGTCCTTGTGGCCGCCCTGTTCGCAACGACTGTGATAGCAGGAATGGAACAGTTG
GCGGCCGTTTTACCCTCATGTGCGGTAGGTCGTGCAATTCTTCTGCCGTGATTTTAGCGCGAACTCGATATCACT
GACCCTTCTTAGCTGGACTGTATGATGACTTCGGTGTCGCAATCTTCCTGCAAGACAACCGACCAGACATGCCTG
TGCAATGATGTACACTACACGGCCGTTCTGCAGGAGTGTGTTCTTGCCAATTGTACAATTCGAGAATCTCTAAGT
GAGTCAATGGTTTTATGACTAGTTATTTTATTCCCTGCTAATATACACAAGCTACAAAAAATGTCACGACATCAG
CATGCGGGGACCCAATTCGGGATCACACAAAGACTGTATCTTATGCAGGGGTTGCAGGCGGAATTATAGCCCTTT
GCGCTTTTATTCTCCGGATAGTGGCTCGATTTAGATGCTGTGGTGGCATTTTTGGAGCGGATGATTGGACAATGG
TGTTGACAATGGTATATACCACCTTTCCCTTTGCTCGAAACCGAATTTTCTTCTCACTGAAATTGACAGGCCTTT
CTCATACCACTTTCAGCACTCTCGGTCGTCTGTACGGTTTCCTTGGCAGCTAGTCAAAGCCCCTTCACCCCACTA
ACCATTTGTATAGTGGCCGATACAGGTTTAGGGAAGGATATGTGGACCCTTCCTTTCGACAATATCACTCATATT
CTTTACGTGAGTACCCCAAAGTTCTTGTTTCCTGCTCTTCCCAAGGTACGTTGTCTAATTGCGCCAGGTCTACTT
TTGGGATGAATTGTTGTATCTGAGCATTCTCCCGCTGACCAAAATATCAATCTGTTTTTTCTATCTTCGTATTTT
CCCCGATCGGAGGTTTCGGACAGCAACGTACGTGGTGATTGCACTAAACGTCTCCTATTGGATCGCCTTTGTCTT
GATATCGGTATTCCAGTGTCGGCCTCTACCCGGAGCGTGGCATCGCTGGTATGGAGAGGAGAACTACAAATGCAA
CCACATCAACGCACAGGGCTGGTCATCGGCAGTGCTTAACATGGTTCTCGATATAATTGTCATGGCACTCCCTCT
ACGACAGCTATACGGTTTGAACCTTTCCATGAAACGGAAATCATTCGTAATTTGCATGTTCAGCCTGGGCATATT
GTGCGTTTCCCTATTCAGCCTGTTCCAGAATTTCAGTGACTAACCCATGAGCTTAGTGTCACCCTTGTCAGCATC
CTGCGGCTGAATTCACTCATTCACTTTGCCTCTACCACTAACCTTACATGTGAGTGTTCATTCCCTCTCTTTTCT
CTTTCTGTATTCGCAGTTTCATTGACATCTAGAAGGGGATTACGTGGCTATAGGGTATTGGAGTACTATTGAATG
TGACGTTGGCGTTATATGTGCGTGTCTGCCCGCTATTCGATCTCTACTACGTCGTATATCTCCCCGATTTTTTGG
AGATACCGAGCAAGCCAAATCATCATCATACGCTATGAACTCGCGTTCTCGTGGGACTTCTGGCCCTGTCCAGAA
CAAGAGTAGTGATGGCCCATTCTACCAGTTTGATGACTTGGACCTTTCTGATGAAGCCCGACTACACCATCCACA
ACCAGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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