Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g8162.t1
Gene name
Location	scaffold_29:269173..270466
Strand	-
Gene length (bp)	1293
Transcript length (bp)	1293
Coding sequence length (bp)	1293
Protein length (aa)	431

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00501	AMP-binding	AMP-binding enzyme	4.5E-30	227	429
PF00668	Condensation	Condensation domain	3.5E-09	14	208

GO

GO Term	Description	Terminal node
GO:0003824	catalytic activity	Yes
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8162.t1 MIGQKNAETSVYGDVSLLSQAKEFAHEHQVSVKVVLLAGWAVNFSRHLQSDDVAFYTNLRDCSFDTEYIVGPMDV TAPLRIQPLENESTLEALYRLESEKRTVSQSSYVGGSAIREYSQSQASLTSMFTVRESEIPMHKVEALDVTTETT LNWPTGQLSLVHDSSYSSARAKIILQHFWEVLQQIISSPYDRFKSLSLTSEQEKSSLLSFRSSRGNVSPQVGHNL IEKQTRDNGDAPALQFQLSEFMSFAKLNAAANRVAHRLTGLMSTGTIVPVHMDVSVQFVIVLLAILKAGGAYVIL DHFQPPSRKAYILNDVKAPFYMKNGGPIKGIADVLAYSITDLMHGSTPDAEIDLGLSLDPEQPAYIIYTSGSTGV LKGVVLSHRAASTGILCAPDISNNRSLLFYNPIFSAAQRTILSTLAKGGCLCLAS*
Coding	>Pro_DTO377G3_2\|g8162.t1 ATGATTGGACAGAAGAACGCTGAAACGAGTGTATACGGCGATGTTAGCCTTCTCTCTCAAGCAAAGGAGTTTGCA CACGAGCATCAAGTTAGCGTCAAAGTGGTGCTCCTTGCCGGCTGGGCTGTCAACTTTTCCCGCCATCTGCAGAGC GATGATGTGGCCTTTTATACCAACCTTCGGGATTGCAGCTTTGACACAGAATATATCGTTGGTCCTATGGACGTG ACCGCTCCTCTTCGAATTCAACCTTTGGAGAACGAGTCCACACTCGAAGCTCTCTATAGATTGGAAAGCGAAAAG AGAACTGTTTCTCAATCTTCCTATGTGGGAGGAAGCGCCATCAGGGAGTACAGCCAAAGCCAAGCCTCCCTGACG TCCATGTTCACTGTTCGTGAATCAGAGATCCCCATGCACAAAGTTGAGGCCCTCGATGTTACCACAGAAACAACA CTCAACTGGCCAACTGGCCAACTCTCCCTGGTCCATGACTCGAGTTACTCATCGGCCCGAGCCAAGATCATTTTG CAGCACTTCTGGGAAGTCCTCCAGCAGATCATCTCGAGTCCATACGACCGATTCAAGAGTTTGAGTCTCACGTCC GAGCAAGAGAAAAGCTCCCTGTTGAGCTTCAGGTCTTCCCGTGGAAACGTCTCCCCTCAGGTGGGGCATAACCTG ATTGAGAAACAAACTCGTGATAATGGAGATGCTCCAGCTCTACAGTTTCAACTTAGCGAATTCATGAGCTTTGCT AAGCTGAATGCTGCTGCGAACCGTGTCGCTCATCGTCTCACTGGGTTGATGTCGACAGGGACCATCGTTCCGGTT CACATGGATGTATCCGTCCAGTTCGTGATTGTTCTCCTGGCTATTCTGAAGGCGGGAGGTGCCTATGTGATTCTT GATCACTTCCAGCCACCATCTCGCAAAGCATACATTCTCAACGATGTCAAAGCACCATTCTACATGAAAAATGGG GGCCCTATCAAAGGGATTGCAGATGTGCTGGCTTACTCAATTACGGATCTCATGCATGGTTCCACCCCCGATGCG GAAATCGATTTGGGCTTATCTCTGGACCCTGAGCAGCCTGCATATATCATTTATACCTCGGGGTCTACCGGTGTT CTCAAGGGCGTGGTCTTGAGTCACCGCGCGGCTTCCACTGGGATCCTCTGTGCTCCAGATATATCCAACAACCGC AGCCTGCTTTTCTACAATCCCATCTTCTCAGCAGCCCAGAGAACCATTCTGTCTACTCTAGCCAAGGGTGGCTGT CTCTGCCTGGCAAGTTGA
Transcript	>Pro_DTO377G3_2\|g8162.t1 ATGATTGGACAGAAGAACGCTGAAACGAGTGTATACGGCGATGTTAGCCTTCTCTCTCAAGCAAAGGAGTTTGCA CACGAGCATCAAGTTAGCGTCAAAGTGGTGCTCCTTGCCGGCTGGGCTGTCAACTTTTCCCGCCATCTGCAGAGC GATGATGTGGCCTTTTATACCAACCTTCGGGATTGCAGCTTTGACACAGAATATATCGTTGGTCCTATGGACGTG ACCGCTCCTCTTCGAATTCAACCTTTGGAGAACGAGTCCACACTCGAAGCTCTCTATAGATTGGAAAGCGAAAAG AGAACTGTTTCTCAATCTTCCTATGTGGGAGGAAGCGCCATCAGGGAGTACAGCCAAAGCCAAGCCTCCCTGACG TCCATGTTCACTGTTCGTGAATCAGAGATCCCCATGCACAAAGTTGAGGCCCTCGATGTTACCACAGAAACAACA CTCAACTGGCCAACTGGCCAACTCTCCCTGGTCCATGACTCGAGTTACTCATCGGCCCGAGCCAAGATCATTTTG CAGCACTTCTGGGAAGTCCTCCAGCAGATCATCTCGAGTCCATACGACCGATTCAAGAGTTTGAGTCTCACGTCC GAGCAAGAGAAAAGCTCCCTGTTGAGCTTCAGGTCTTCCCGTGGAAACGTCTCCCCTCAGGTGGGGCATAACCTG ATTGAGAAACAAACTCGTGATAATGGAGATGCTCCAGCTCTACAGTTTCAACTTAGCGAATTCATGAGCTTTGCT AAGCTGAATGCTGCTGCGAACCGTGTCGCTCATCGTCTCACTGGGTTGATGTCGACAGGGACCATCGTTCCGGTT CACATGGATGTATCCGTCCAGTTCGTGATTGTTCTCCTGGCTATTCTGAAGGCGGGAGGTGCCTATGTGATTCTT GATCACTTCCAGCCACCATCTCGCAAAGCATACATTCTCAACGATGTCAAAGCACCATTCTACATGAAAAATGGG GGCCCTATCAAAGGGATTGCAGATGTGCTGGCTTACTCAATTACGGATCTCATGCATGGTTCCACCCCCGATGCG GAAATCGATTTGGGCTTATCTCTGGACCCTGAGCAGCCTGCATATATCATTTATACCTCGGGGTCTACCGGTGTT CTCAAGGGCGTGGTCTTGAGTCACCGCGCGGCTTCCACTGGGATCCTCTGTGCTCCAGATATATCCAACAACCGC AGCCTGCTTTTCTACAATCCCATCTTCTCAGCAGCCCAGAGAACCATTCTGTCTACTCTAGCCAAGGGTGGCTGT CTCTGCCTGGCAAGTTGA
Gene	>Pro_DTO377G3_2\|g8162.t1 ATGATTGGACAGAAGAACGCTGAAACGAGTGTATACGGCGATGTTAGCCTTCTCTCTCAAGCAAAGGAGTTTGCA CACGAGCATCAAGTTAGCGTCAAAGTGGTGCTCCTTGCCGGCTGGGCTGTCAACTTTTCCCGCCATCTGCAGAGC GATGATGTGGCCTTTTATACCAACCTTCGGGATTGCAGCTTTGACACAGAATATATCGTTGGTCCTATGGACGTG ACCGCTCCTCTTCGAATTCAACCTTTGGAGAACGAGTCCACACTCGAAGCTCTCTATAGATTGGAAAGCGAAAAG AGAACTGTTTCTCAATCTTCCTATGTGGGAGGAAGCGCCATCAGGGAGTACAGCCAAAGCCAAGCCTCCCTGACG TCCATGTTCACTGTTCGTGAATCAGAGATCCCCATGCACAAAGTTGAGGCCCTCGATGTTACCACAGAAACAACA CTCAACTGGCCAACTGGCCAACTCTCCCTGGTCCATGACTCGAGTTACTCATCGGCCCGAGCCAAGATCATTTTG CAGCACTTCTGGGAAGTCCTCCAGCAGATCATCTCGAGTCCATACGACCGATTCAAGAGTTTGAGTCTCACGTCC GAGCAAGAGAAAAGCTCCCTGTTGAGCTTCAGGTCTTCCCGTGGAAACGTCTCCCCTCAGGTGGGGCATAACCTG ATTGAGAAACAAACTCGTGATAATGGAGATGCTCCAGCTCTACAGTTTCAACTTAGCGAATTCATGAGCTTTGCT AAGCTGAATGCTGCTGCGAACCGTGTCGCTCATCGTCTCACTGGGTTGATGTCGACAGGGACCATCGTTCCGGTT CACATGGATGTATCCGTCCAGTTCGTGATTGTTCTCCTGGCTATTCTGAAGGCGGGAGGTGCCTATGTGATTCTT GATCACTTCCAGCCACCATCTCGCAAAGCATACATTCTCAACGATGTCAAAGCACCATTCTACATGAAAAATGGG GGCCCTATCAAAGGGATTGCAGATGTGCTGGCTTACTCAATTACGGATCTCATGCATGGTTCCACCCCCGATGCG GAAATCGATTTGGGCTTATCTCTGGACCCTGAGCAGCCTGCATATATCATTTATACCTCGGGGTCTACCGGTGTT CTCAAGGGCGTGGTCTTGAGTCACCGCGCGGCTTCCACTGGGATCCTCTGTGCTCCAGATATATCCAACAACCGC AGCCTGCTTTTCTACAATCCCATCTTCTCAGCAGCCCAGAGAACCATTCTGTCTACTCTAGCCAAGGGTGGCTGT CTCTGCCTGGCAAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail