Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g8160.t1
Gene name
Location	scaffold_29:265267..266677
Strand	+
Gene length (bp)	1410
Transcript length (bp)	1137
Coding sequence length (bp)	1137
Protein length (aa)	379

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	4.3E-55	33	322

GO

GO Term	Description	Terminal node
GO:0005524	ATP binding	Yes
GO:0004812	aminoacyl-tRNA ligase activity	Yes
GO:0000166	nucleotide binding	Yes
GO:0006418	tRNA aminoacylation for protein translation	Yes
GO:0043039	tRNA aminoacylation	No
GO:0005488	binding	No
GO:0016875	ligase activity, forming carbon-oxygen bonds	No
GO:0006520	cellular amino acid metabolic process	No
GO:0008152	metabolic process	No
GO:0006399	tRNA metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0030554	adenyl nucleotide binding	No
GO:0006082	organic acid metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0036094	small molecule binding	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0097367	carbohydrate derivative binding	No
GO:0017076	purine nucleotide binding	No
GO:0008150	biological_process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0043167	ion binding	No
GO:0019752	carboxylic acid metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0003824	catalytic activity	No
GO:0043038	amino acid activation	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0044238	primary metabolic process	No
GO:0034660	ncRNA metabolic process	No
GO:0009987	cellular process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No
GO:0140101	catalytic activity, acting on a tRNA	No
GO:0043436	oxoacid metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0032555	purine ribonucleotide binding	No
GO:0032553	ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0016874	ligase activity	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044281	small molecule metabolic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8160.t1 MALSAEERFDLIRDNLGEILNPELIESILAEGRNPRVYWGTATTGRPHSGYFVAAIKIAQLLASGCEVVILLADV HAFLDSMKAPLELVENRVKYYEKIITAVLEAVGVSTEKLEFVLGSSYQRSSDYVMDVYRLAAMTSEHDCRKAGAE IVKQSTNAPMSGLLYPILQVLDEEYLKVDAELGGLDQRKLFTAATEWLPKLGYRKRAHLITPMVAGLSGGKMSSS IEDSKIDLLDPPEIVAKKIRKSEAVPRVVENNGIIAMVEFVLLPAAALAGKKEFRVARRDNEPLIYTNIQQLKED YTNDVLTPQDLKPAAAEALTRLMAPIHKAYADSPEWQEITLKAYPPPVVQKKEKKVKDRGSRFPGANKEKDIPER PKA*
Coding	>Pro_DTO377G3_2\|g8160.t1 ATGGCTTTATCTGCGGAGGAAAGATTTGATCTCATTCGGGACAATCTCGGCGAGATTCTTAACCCGGAACTGATC GAGAGCATCCTTGCCGAGGGGCGCAATCCCCGTGTGTACTGGGGCACTGCTACAACTGGTCGGCCTCATTCCGGT TATTTCGTCGCCGCAATCAAGATCGCCCAGCTACTAGCGTCAGGATGTGAGGTGGTGATTCTCCTTGCGGACGTG CACGCGTTTCTAGATTCAATGAAAGCGCCTCTCGAACTGGTGGAAAACCGTGTCAAATACTACGAAAAGATCATC ACAGCAGTCCTAGAGGCTGTGGGCGTGTCGACGGAGAAGCTCGAGTTCGTGCTTGGGAGTTCCTACCAGCGGAGT TCCGACTATGTTATGGATGTCTACCGGCTTGCCGCTATGACCTCTGAGCATGATTGTAGGAAGGCTGGTGCAGAG ATTGTGAAGCAATCTACCAACGCCCCAATGAGCGGCCTGCTCTACCCGATCCTTCAGGTCCTCGATGAGGAGTAT CTTAAGGTCGATGCCGAATTAGGCGGCCTGGATCAGAGGAAGCTCTTCACCGCAGCAACAGAATGGCTACCCAAA CTCGGATACCGAAAGCGTGCCCATCTTATCACTCCAATGGTTGCAGGCCTCAGCGGGGGCAAAATGAGCTCTAGT ATCGAAGATAGCAAGATTGATCTCCTCGACCCACCTGAGATAGTCGCCAAGAAGATCCGTAAATCGGAAGCGGTC CCTCGAGTCGTCGAGAACAATGGCATAATTGCCATGGTGGAATTCGTCTTGCTCCCCGCAGCCGCCCTCGCTGGC AAGAAGGAATTCCGCGTGGCACGCCGGGATAACGAACCTCTCATCTACACTAACATCCAACAACTCAAAGAGGAT TACACAAACGACGTTTTGACTCCCCAAGATCTAAAGCCTGCAGCAGCAGAGGCTCTGACCCGTCTCATGGCACCT ATTCATAAAGCCTATGCAGATTCACCCGAATGGCAGGAAATCACCCTCAAGGCCTACCCGCCTCCAGTTGTACAG AAGAAGGAGAAGAAGGTCAAGGATAGAGGTTCCCGCTTCCCTGGGGCTAATAAGGAAAAGGATATCCCAGAACGT CCCAAGGCTTAA
Transcript	>Pro_DTO377G3_2\|g8160.t1 ATGGCTTTATCTGCGGAGGAAAGATTTGATCTCATTCGGGACAATCTCGGCGAGATTCTTAACCCGGAACTGATC GAGAGCATCCTTGCCGAGGGGCGCAATCCCCGTGTGTACTGGGGCACTGCTACAACTGGTCGGCCTCATTCCGGT TATTTCGTCGCCGCAATCAAGATCGCCCAGCTACTAGCGTCAGGATGTGAGGTGGTGATTCTCCTTGCGGACGTG CACGCGTTTCTAGATTCAATGAAAGCGCCTCTCGAACTGGTGGAAAACCGTGTCAAATACTACGAAAAGATCATC ACAGCAGTCCTAGAGGCTGTGGGCGTGTCGACGGAGAAGCTCGAGTTCGTGCTTGGGAGTTCCTACCAGCGGAGT TCCGACTATGTTATGGATGTCTACCGGCTTGCCGCTATGACCTCTGAGCATGATTGTAGGAAGGCTGGTGCAGAG ATTGTGAAGCAATCTACCAACGCCCCAATGAGCGGCCTGCTCTACCCGATCCTTCAGGTCCTCGATGAGGAGTAT CTTAAGGTCGATGCCGAATTAGGCGGCCTGGATCAGAGGAAGCTCTTCACCGCAGCAACAGAATGGCTACCCAAA CTCGGATACCGAAAGCGTGCCCATCTTATCACTCCAATGGTTGCAGGCCTCAGCGGGGGCAAAATGAGCTCTAGT ATCGAAGATAGCAAGATTGATCTCCTCGACCCACCTGAGATAGTCGCCAAGAAGATCCGTAAATCGGAAGCGGTC CCTCGAGTCGTCGAGAACAATGGCATAATTGCCATGGTGGAATTCGTCTTGCTCCCCGCAGCCGCCCTCGCTGGC AAGAAGGAATTCCGCGTGGCACGCCGGGATAACGAACCTCTCATCTACACTAACATCCAACAACTCAAAGAGGAT TACACAAACGACGTTTTGACTCCCCAAGATCTAAAGCCTGCAGCAGCAGAGGCTCTGACCCGTCTCATGGCACCT ATTCATAAAGCCTATGCAGATTCACCCGAATGGCAGGAAATCACCCTCAAGGCCTACCCGCCTCCAGTTGTACAG AAGAAGGAGAAGAAGGTCAAGGATAGAGGTTCCCGCTTCCCTGGGGCTAATAAGGAAAAGGATATCCCAGAACGT CCCAAGGCTTAA
Gene	>Pro_DTO377G3_2\|g8160.t1 ATGGCTTTATCTGCGGAGGAAAGATTTGATCTCATTCGGGACAATCTCGGCGAGATTCTTAACCCGGAACTGATC GAGAGCATCCTTGCCGAGGGGCGCAATCCCCGTGTGTACTGGGGTAATGACTCCCTACCTTCTACCATTCAATAG GCGAACTGACATCTCTTGTCCTGTTTTAGGCACTGCTACAACTGGTCGGCCTCATTCCGGTTATTTCGTCGCCGC AATCAAGATCGCCCAGCTACTAGCGTCAGGATGTGAGGTGGTGATTCTCCTTGCGGACGTGCACGCGTTTCTAGA TTCAATGAAAGCGCCTCTCGAACTGGTGGAAAACCGTGTCAAATACTACGAAAAGATCATCACAGCAGTCCTAGA GGCTGTGGGCGTGTCGACGGAGAAGCTCGAGTTCGTGCTTGGGAGTTCCTACCAGCGGAGTTCCGACTATGTTAT GGATGTCTACCGGCTTGCCGCTATGACCTCTGAGCATGATTGTAGGAAGGCTGGTGCAGAGATTGTGAAGCAATC TACCAACGCCCCAATGAGCGGCCTGCTCTACCCGATCCTTCAGGTCCTCGATGAGGAGTATCTTAAGGTCGATGC CGAATTAGGCGGTATGTCTAACTCTACTTGCATATCTACACTATTTCTAACGAAAAAAAAGGCCTGGATCAGAGG AAGCTCTTCACCGCAGCAACAGAATGGCTACCCAAACTCGGATACCGAAAGGTAAAGGATATATCCATGGGGCAA GGCTTAATGAATATCGCTAATGATTTTCAACTCCTAGCGTGCCCATCTTATCACTCCAATGGTTGCAGGCCTCAG CGGGGGCAAAATGAGCTCTAGTATCGAAGGTATGTAAAGCTAAATCTCTCGTCTAAAGCGTTCCAAACTAACCCT ATCTAGATAGCAAGATTGATCTCCTCGACCCACCTGAGATAGTCGCCAAGAAGATCCGTAAATCGGAAGCGGTCC CTCGAGTCGTCGAGAACAATGGCATAATTGCCATGGTGGAATTCGTCTTGCTCCCCGCAGCCGCCCTCGCTGGCA AGAAGGAATTCCGCGTGGCACGCCGGGATAACGAACCTCTCATCTACACTAACATCCAACAACTCAAAGAGGATT ACACAAACGACGTTGTATGTTAATATTTTTGCTTGCTCCCGGAAACCTACTAACATTACCTAGTTGACTCCCCAA GATCTAAAGCCTGCAGCAGCAGAGGCTCTGACCCGTCTCATGGCACCTATTCATAAAGCCTATGCAGATTCACCC GAATGGCAGGAAATCACCCTCAAGGCCTACCCGCCTCCAGTTGTACAGAAGAAGGAGAAGAAGGTCAAGGATAGA GGTTCCCGCTTCCCTGGGGCTAATAAGGAAAAGGATATCCCAGAACGTCCCAAGGCTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences