Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8158.t1
Gene name
Locationscaffold_29:258545..260878
Strand-
Gene length (bp)2333
Transcript length (bp)2118
Coding sequence length (bp)2118
Protein length (aa) 706

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 1.3E-18 205 443
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 7.5E-07 24 56

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008152 metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0003676 nucleic acid binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0019438 aromatic compound biosynthetic process No
GO:0008150 biological_process No
GO:0140110 transcription regulator activity No
GO:0050789 regulation of biological process No
GO:0005488 binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0065007 biological regulation No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0009058 biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0051252 regulation of RNA metabolic process No
GO:0043167 ion binding No
GO:0032774 RNA biosynthetic process No
GO:0046872 metal ion binding No
GO:0016070 RNA metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0044238 primary metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0009987 cellular process No
GO:0050794 regulation of cellular process No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:1901363 heterocyclic compound binding No
GO:0097659 nucleic acid-templated transcription No
GO:0003700 DNA-binding transcription factor activity No
GO:0043169 cation binding No
GO:0080090 regulation of primary metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0019222 regulation of metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0003674 molecular_function No
GO:0046483 heterocycle metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8158.t1
MTPDRELNQGTKRKRGERRRAFLACETCRKQKEKCEGGPPCWRCQRLGRPCHFQGQPTQIATSPCSSTVPVASIP
KDQSRRIQSLEDIARHFLGDLPLDEENIVRIADKLRNSTNTVLPETALDINESFDVQFVSDNMAHYSGEFSHWNF
SQTLRRKMSCQIDQFDLRVKEYWRPTQLQSPPEVIVETLTHLPPRAIADFLITMFFKYVEVNSFYMERKWIEEKV
ALCYSPKTTYTAIDFPWVCSVFVVMAIGTQVAHMEDEKPNPASEITEELNLCSEDSVGLVFYHAACKLIPDVLLV
ASHESVQVFLLLATYSLPVSTGGLAYTYYGLAMKMAIQNGMHRKYHGGNCDSRTIEVRNRLFWTAYTIEKYISIL
HGRPLSIARSEINADMPRDCPTFESPRFANLTAFHTLISYLGEVSETLAQFKRCPKRLLSEYLERLVRLRTSIKQ
WWDSLPATEECRDLCSQGPNFRQNSHLRLCYLLIYVYMGRAFIFVDDRKQADEAIIGPDQDSGRAHRLVLVDDCV
SSALDILNTLQSLSDHVGLCRASYNEFGACRAAILVILAECLNAGKCQRLQDGLHRGMSLIRQMVGGSSSKSDIS
YLESIEAAISRLEAIPEEGSISHPQSDESSISAYSKFKDWTQSLKKDKSAGGNLELSSFSPLSHLTPSTELFADP
ELNDMTAFFEPHWSNGDFQFDAYNLSSLSN*
Coding >Pro_DTO377G3_2|g8158.t1
ATGACCCCCGATCGAGAACTAAATCAGGGTACTAAGCGTAAGCGCGGGGAGCGGAGACGCGCCTTCTTGGCTTGC
GAGACATGTAGAAAACAAAAGGAGAAATGTGAGGGCGGTCCACCCTGCTGGAGATGTCAGCGACTAGGGCGACCG
TGCCATTTCCAAGGCCAGCCGACCCAGATAGCGACATCCCCCTGCTCCTCAACCGTCCCCGTCGCGTCCATTCCG
AAAGACCAGAGTCGGCGAATACAAAGCCTGGAGGATATCGCCCGTCATTTTCTTGGGGATTTGCCTTTAGATGAG
GAGAATATCGTCCGTATCGCGGACAAATTACGAAACTCGACGAACACCGTCCTGCCGGAAACTGCCCTGGATATC
AACGAGTCATTTGACGTTCAGTTCGTGTCAGATAATATGGCACATTACTCGGGGGAGTTTTCTCACTGGAATTTT
TCCCAGACATTACGCCGCAAAATGAGCTGCCAAATAGATCAGTTTGATTTGAGGGTTAAAGAATACTGGCGGCCA
ACCCAGCTTCAATCCCCACCAGAAGTGATAGTGGAGACATTGACACATTTACCACCAAGAGCTATTGCCGACTTC
CTCATCACCATGTTTTTCAAATATGTTGAGGTCAACTCCTTTTACATGGAACGGAAATGGATTGAAGAGAAGGTA
GCGCTCTGTTACAGTCCGAAAACTACATATACGGCCATTGATTTCCCTTGGGTATGCTCTGTTTTTGTTGTTATG
GCCATTGGGACTCAGGTAGCCCACATGGAGGATGAAAAACCAAATCCCGCTTCGGAGATCACGGAAGAACTGAAC
TTGTGCTCTGAAGACTCTGTCGGGCTAGTCTTTTATCATGCGGCATGCAAGCTCATTCCTGATGTTCTTTTGGTT
GCTTCTCACGAAAGTGTGCAGGTTTTCTTGCTTCTCGCCACATATTCATTACCTGTTTCGACGGGTGGCCTTGCA
TATACCTATTACGGTCTTGCAATGAAGATGGCGATTCAAAATGGGATGCATCGCAAATATCATGGTGGTAACTGC
GACTCCAGAACTATTGAAGTCAGAAATCGGTTATTTTGGACAGCATACACTATTGAAAAATATATCAGTATCCTC
CATGGACGCCCTCTGTCGATTGCACGATCGGAAATAAACGCGGATATGCCAAGAGACTGTCCCACCTTTGAGTCA
CCACGATTTGCCAATCTAACCGCGTTCCATACATTGATTTCATACTTGGGAGAGGTCTCCGAGACACTTGCACAA
TTTAAAAGATGTCCGAAAAGGCTTCTCTCTGAATATTTAGAGCGACTCGTACGGCTAAGGACCAGTATCAAGCAA
TGGTGGGACTCACTTCCAGCCACTGAAGAATGTCGGGATCTATGCTCGCAAGGCCCGAATTTCCGACAAAACTCG
CATCTCCGACTGTGTTATCTGCTTATATATGTGTACATGGGCCGTGCATTCATATTCGTTGATGACAGGAAACAA
GCAGATGAAGCTATAATTGGTCCAGATCAAGATTCAGGACGGGCGCATCGGTTAGTTTTGGTGGACGACTGCGTG
TCGAGTGCTTTGGACATTCTTAACACTCTGCAATCCTTATCCGACCATGTTGGTCTTTGCCGCGCTTCTTACAAT
GAATTCGGTGCTTGTCGTGCGGCTATTCTGGTCATTCTTGCAGAATGTCTCAACGCAGGAAAGTGCCAGAGACTT
CAAGATGGCCTACACCGTGGAATGAGTCTCATACGTCAGATGGTCGGAGGAAGCTCTTCGAAATCCGACATCTCA
TATCTCGAATCTATCGAAGCAGCTATCAGCCGGCTAGAAGCCATCCCTGAAGAAGGATCCATTTCCCATCCACAA
AGCGATGAAAGCTCTATCTCTGCCTATTCGAAGTTCAAAGACTGGACGCAGTCACTGAAGAAGGACAAATCTGCA
GGTGGAAATTTGGAGCTGTCTTCTTTTAGCCCGCTGTCGCATCTCACACCTAGCACAGAACTTTTCGCGGACCCG
GAGCTGAATGATATGACAGCTTTCTTTGAGCCTCATTGGTCTAATGGGGATTTCCAGTTTGATGCGTATAATCTT
TCATCTCTGTCAAATTGA
Transcript >Pro_DTO377G3_2|g8158.t1
ATGACCCCCGATCGAGAACTAAATCAGGGTACTAAGCGTAAGCGCGGGGAGCGGAGACGCGCCTTCTTGGCTTGC
GAGACATGTAGAAAACAAAAGGAGAAATGTGAGGGCGGTCCACCCTGCTGGAGATGTCAGCGACTAGGGCGACCG
TGCCATTTCCAAGGCCAGCCGACCCAGATAGCGACATCCCCCTGCTCCTCAACCGTCCCCGTCGCGTCCATTCCG
AAAGACCAGAGTCGGCGAATACAAAGCCTGGAGGATATCGCCCGTCATTTTCTTGGGGATTTGCCTTTAGATGAG
GAGAATATCGTCCGTATCGCGGACAAATTACGAAACTCGACGAACACCGTCCTGCCGGAAACTGCCCTGGATATC
AACGAGTCATTTGACGTTCAGTTCGTGTCAGATAATATGGCACATTACTCGGGGGAGTTTTCTCACTGGAATTTT
TCCCAGACATTACGCCGCAAAATGAGCTGCCAAATAGATCAGTTTGATTTGAGGGTTAAAGAATACTGGCGGCCA
ACCCAGCTTCAATCCCCACCAGAAGTGATAGTGGAGACATTGACACATTTACCACCAAGAGCTATTGCCGACTTC
CTCATCACCATGTTTTTCAAATATGTTGAGGTCAACTCCTTTTACATGGAACGGAAATGGATTGAAGAGAAGGTA
GCGCTCTGTTACAGTCCGAAAACTACATATACGGCCATTGATTTCCCTTGGGTATGCTCTGTTTTTGTTGTTATG
GCCATTGGGACTCAGGTAGCCCACATGGAGGATGAAAAACCAAATCCCGCTTCGGAGATCACGGAAGAACTGAAC
TTGTGCTCTGAAGACTCTGTCGGGCTAGTCTTTTATCATGCGGCATGCAAGCTCATTCCTGATGTTCTTTTGGTT
GCTTCTCACGAAAGTGTGCAGGTTTTCTTGCTTCTCGCCACATATTCATTACCTGTTTCGACGGGTGGCCTTGCA
TATACCTATTACGGTCTTGCAATGAAGATGGCGATTCAAAATGGGATGCATCGCAAATATCATGGTGGTAACTGC
GACTCCAGAACTATTGAAGTCAGAAATCGGTTATTTTGGACAGCATACACTATTGAAAAATATATCAGTATCCTC
CATGGACGCCCTCTGTCGATTGCACGATCGGAAATAAACGCGGATATGCCAAGAGACTGTCCCACCTTTGAGTCA
CCACGATTTGCCAATCTAACCGCGTTCCATACATTGATTTCATACTTGGGAGAGGTCTCCGAGACACTTGCACAA
TTTAAAAGATGTCCGAAAAGGCTTCTCTCTGAATATTTAGAGCGACTCGTACGGCTAAGGACCAGTATCAAGCAA
TGGTGGGACTCACTTCCAGCCACTGAAGAATGTCGGGATCTATGCTCGCAAGGCCCGAATTTCCGACAAAACTCG
CATCTCCGACTGTGTTATCTGCTTATATATGTGTACATGGGCCGTGCATTCATATTCGTTGATGACAGGAAACAA
GCAGATGAAGCTATAATTGGTCCAGATCAAGATTCAGGACGGGCGCATCGGTTAGTTTTGGTGGACGACTGCGTG
TCGAGTGCTTTGGACATTCTTAACACTCTGCAATCCTTATCCGACCATGTTGGTCTTTGCCGCGCTTCTTACAAT
GAATTCGGTGCTTGTCGTGCGGCTATTCTGGTCATTCTTGCAGAATGTCTCAACGCAGGAAAGTGCCAGAGACTT
CAAGATGGCCTACACCGTGGAATGAGTCTCATACGTCAGATGGTCGGAGGAAGCTCTTCGAAATCCGACATCTCA
TATCTCGAATCTATCGAAGCAGCTATCAGCCGGCTAGAAGCCATCCCTGAAGAAGGATCCATTTCCCATCCACAA
AGCGATGAAAGCTCTATCTCTGCCTATTCGAAGTTCAAAGACTGGACGCAGTCACTGAAGAAGGACAAATCTGCA
GGTGGAAATTTGGAGCTGTCTTCTTTTAGCCCGCTGTCGCATCTCACACCTAGCACAGAACTTTTCGCGGACCCG
GAGCTGAATGATATGACAGCTTTCTTTGAGCCTCATTGGTCTAATGGGGATTTCCAGTTTGATGCGTATAATCTT
TCATCTCTGTCAAATTGA
Gene >Pro_DTO377G3_2|g8158.t1
ATGACCCCCGATCGAGAACTAAATCAGGGTACTAAGCGTAAGCGCGGGGAGCGGAGACGCGCCTTCTTGGCGTAA
GTACATTGCTGCCGGGCATCATTTCGCTTTCCACATTGACAATCCTCAAAAAGTTGCGAGACATGTAGAAAACAA
AAGGAGAAATGTGAGGGCGGTCCACCCTGCTGGAGATGTCAGCGACTAGGGCGACCGTGCCATTTCCAAGGCCAG
CCGACCCAGATAGCGACATCCCCCTGCTCCTCAACCGTCCCCGTCGCGTCCATTCCGAAAGACCAGAGTCGGCGA
ATACAAAGCCTGGAGGATATCGCCCGTCATTTTCTTGGGGATTTGCCTTTAGATGAGGAGAATATCGTCCGTATC
GCGGACAAATTACGAAACTCGACGAACACCGTCCTGCCGGAAACTGCCCTGGATATCAACGAGTCATTTGACGTT
CAGTTCGTGTCAGATAATATGGCACATTACTCGGGGGAGTTTTCTCACTGGAATTTTTCCCAGACATTACGCCGC
AAAATGAGCTGCCAAATAGATCAGTTTGATTTGAGGGTTTGTATCTCTCCCCGCAAGGACTGAAGCGTGTCTAAT
GACGTACAAAAGGTTAAAGAATACTGGCGGCCAACCCAGCTTCAATCCCCACCAGAAGTGATAGTGGAGACATTG
ACACATTTACCACCAAGAGCTATTGCCGACTTCCTCATCACCATGTTTTTCAAATATGTTGAGGTCAACTCCTTT
TACATGGAACGGAAATGGATTGAAGAGAAGGTAGCGCTCTGTTACAGTCCGAAAACTACATATACGGCCATTGAT
TTCCCTTGGGTATGCTCTGTTTTTGTTGTTATGGCCATTGGGACTCAGGTAGCCCACATGGAGGATGAAAAACCA
AATCCCGCTTCGGAGATCACGGAAGAACTGAACTTGTGCTCTGAAGACTCTGTCGGGCTAGTCTTTTATCATGCG
GCATGCAAGCTCATTCCTGATGTTCTTTTGGTTGCTTCTCACGAAAGTGTGCAGGTTTTCTTGCTTCTCGCCACA
TATTCATTACCTGTTTCGACGGGTGGCCTTGCATATACCTATTACGGTCTTGCAATGAAGATGGCGATTCAAAAT
GGGATGCATCGCAAATATCATGGTGGTAACTGCGACTCCAGAACTATTGAAGTCAGAAATCGGTTATTTTGGACA
GCATACACTATTGAAAAGTACGATATTCAAGAGACTATTTCACACCAAAGCTAATCAATGCTTCATAGATATATC
AGTATCCTCCATGGACGCCCTCTGTCGATTGCACGATCGGAAATAAACGCGGATATGCCAAGAGACTGTCCCACC
TTTGAGTCACCACGATTTGCCAATCTAACCGCGTTCCATACATTGATTTCATACTTGGGAGAGGTCTCCGAGACA
CTGTAAGTGGCTCAAAATGTGAAACCAGTTTATCGACGACATGCTAATACCTCAATAGTGCACAATTTAAAAGAT
GTCCGAAAAGGCTTCTCTCTGAATATTTAGAGCGACTCGTACGGCTAAGGACCAGTATCAAGCAATGGTGGGACT
CACTTCCAGCCACTGAAGAATGTCGGGATCTATGCTCGCAAGGCCCGAATTTCCGACAAAACTCGCATCTCCGAC
TGTGTTATCTGCTTATATATGTGTACATGGGCCGTGCATTCATATTCGTTGATGACAGGAAACAAGCAGATGAAG
CTATAATTGGTCCAGATCAAGATTCAGGACGGGCGCATCGGTTAGTTTTGGTGGACGACTGCGTGTCGAGTGCTT
TGGACATTCTTAACACTCTGCAATCCTTATCCGACCATGTTGGTCTTTGCCGCGCTTCTTACAATGAATTCGGTG
CTTGTCGTGCGGCTATTCTGGTCATTCTTGCAGAATGTCTCAACGCAGGAAAGTGCCAGAGACTTCAAGATGGCC
TACACCGTGGAATGAGTCTCATACGTCAGATGGTCGGAGGAAGCTCTTCGAAATCCGACATCTCATATCTCGAAT
CTATCGAAGCAGCTATCAGCCGGCTAGAAGCCATCCCTGAAGAAGGATCCATTTCCCATCCACAAAGCGATGAAA
GCTCTATCTCTGCCTATTCGAAGTTCAAAGACTGGACGCAGTCACTGAAGAAGGACAAATCTGCAGGTGGAAATT
TGGAGCTGTCTTCTTTTAGCCCGCTGTCGCATCTCACACCTAGCACAGAACTTTTCGCGGACCCGGAGCTGAATG
ATATGACAGCTTTCTTTGAGCCTCATTGGTCTAATGGGGATTTCCAGTTTGATGCGTATAATCTTTCATCTCTGT
CAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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