Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8130.t1
Gene name
Locationscaffold_29:177025..177960
Strand+
Gene length (bp)935
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 1.9E-36 26 171

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 214 236 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8130.t1
MKSYLALLAFSAVGLCAHGDAASKEMGPAAFLWPPDRLWGAAYDNNAPCGSSTGPVNRTNFPLINGKLALVLQDE
SWKMQVAISHKSNPSTNDDFEPFINGSTLSDIKPGHECYSVPNPSIDIEEGTNATFQIKYTSDFDTDKNETYYAC
ADITYVAASKFTYQVPCFNVTSDEFTDVTTTTTAASGSTATAASGTTKNSATTSEKSSGLSGGAIAGIVVGSVAG
LVIGVALLFFYRRLLQKYRFFRQKASTRNVDWNDDAPQNKVDDNVPIGLRKIR*
Coding >Pro_DTO377G3_2|g8130.t1
ATGAAGAGCTACCTCGCACTACTCGCTTTCTCCGCGGTTGGGTTGTGTGCCCATGGCGACGCAGCGAGCAAAGAG
ATGGGCCCGGCTGCCTTCCTGTGGCCACCCGATCGTCTCTGGGGTGCAGCGTATGACAACAACGCCCCATGCGGC
TCATCAACAGGACCCGTGAACCGAACGAACTTCCCACTTATCAACGGCAAGCTCGCACTTGTACTCCAAGACGAG
TCATGGAAAATGCAGGTTGCTATCTCTCACAAGAGCAACCCAAGTACCAATGATGACTTTGAGCCCTTCATTAAT
GGCTCTACTCTTAGCGACATTAAGCCGGGACACGAATGCTACTCCGTCCCCAACCCATCGATCGACATAGAAGAG
GGAACGAACGCCACCTTCCAGATCAAATACACCTCGGATTTTGATACCGACAAAAACGAAACCTACTACGCGTGT
GCAGACATCACATACGTCGCTGCGAGCAAATTCACCTACCAGGTCCCTTGCTTCAATGTGACAAGTGATGAGTTC
ACCGATGTGACTACTACCACGACCGCTGCATCTGGGTCTACTGCTACTGCGGCGTCGGGCACAACGAAGAACTCG
GCTACCACGAGTGAAAAAAGCTCTGGTCTTTCAGGAGGAGCTATTGCGGGTATTGTCGTTGGCTCTGTGGCTGGA
TTGGTTATTGGAGTTGCCTTACTCTTCTTCTATAGAAGGCTTTTGCAGAAGTATCGCTTCTTCCGGCAAAAGGCT
TCCACCCGGAATGTGGACTGGAATGATGACGCACCTCAAAATAAAGTCGACGATAATGTTCCGATTGGGCTACGC
AAAATTCGGTGA
Transcript >Pro_DTO377G3_2|g8130.t1
ATGAAGAGCTACCTCGCACTACTCGCTTTCTCCGCGGTTGGGTTGTGTGCCCATGGCGACGCAGCGAGCAAAGAG
ATGGGCCCGGCTGCCTTCCTGTGGCCACCCGATCGTCTCTGGGGTGCAGCGTATGACAACAACGCCCCATGCGGC
TCATCAACAGGACCCGTGAACCGAACGAACTTCCCACTTATCAACGGCAAGCTCGCACTTGTACTCCAAGACGAG
TCATGGAAAATGCAGGTTGCTATCTCTCACAAGAGCAACCCAAGTACCAATGATGACTTTGAGCCCTTCATTAAT
GGCTCTACTCTTAGCGACATTAAGCCGGGACACGAATGCTACTCCGTCCCCAACCCATCGATCGACATAGAAGAG
GGAACGAACGCCACCTTCCAGATCAAATACACCTCGGATTTTGATACCGACAAAAACGAAACCTACTACGCGTGT
GCAGACATCACATACGTCGCTGCGAGCAAATTCACCTACCAGGTCCCTTGCTTCAATGTGACAAGTGATGAGTTC
ACCGATGTGACTACTACCACGACCGCTGCATCTGGGTCTACTGCTACTGCGGCGTCGGGCACAACGAAGAACTCG
GCTACCACGAGTGAAAAAAGCTCTGGTCTTTCAGGAGGAGCTATTGCGGGTATTGTCGTTGGCTCTGTGGCTGGA
TTGGTTATTGGAGTTGCCTTACTCTTCTTCTATAGAAGGCTTTTGCAGAAGTATCGCTTCTTCCGGCAAAAGGCT
TCCACCCGGAATGTGGACTGGAATGATGACGCACCTCAAAATAAAGTCGACGATAATGTTCCGATTGGGCTACGC
AAAATTCGGTGA
Gene >Pro_DTO377G3_2|g8130.t1
ATGAAGAGCTACCTCGCACTACTCGCTTTCTCCGCGGTTGGGTTGTGTGCCCATGGCGACGCAGCGAGCAAAGAG
ATGGGCCCGGCTGCCTTCCTGTGGCCACCCGATCGTCTCTGGGGTGCAGCGTATGACAACAACGCCCCATGCGGC
TCATCAACAGGACCCGTGAACCGAACGAACTTCCCACTTAGTAAGAGCCTCACTATCCACAAAAAGGGACATACT
GACAAGACATTGTAGTCAACGGCAAGCTCGCACTTGTACTCCAAGACGAGTCATGGAAAATGCAGGTTGCTATCT
CTCACAAGAGCAGTAAGCTAACTTCATCAATCCTATCTATCCAGACTGACCTTCCCTTAGACCCAAGTACCAATG
ATGACTTTGAGCCCTTCATTAATGGCTCTACTCTTAGCGACATTAAGCCGGGACACGAATGCTACTCCGTCCCCA
ACCCATCGATCGACATAGAAGAGGGAACGAACGCCACCTTCCAGATCAAATACACCTCGGATTTTGATACCGACA
AAAACGAAACCTACTACGCGTGTGCAGACATCACATACGTCGCTGCGAGCAAATTCACCTACCAGGTCCCTTGCT
TCAATGTGACAAGTGATGAGTTCACCGATGTGACTACTACCACGACCGCTGCATCTGGGTCTACTGCTACTGCGG
CGTCGGGCACAACGAAGAACTCGGCTACCACGAGTGAAAAAAGCTCTGGTCTTTCAGGAGGAGCTATTGCGGGTA
TTGTCGTTGGCTCTGTGGCTGGATTGGTTATTGGAGTTGCCTTACTCTTCTTCTATAGAAGGCTTTTGCAGAAGT
ATCGCTTCTTCCGGCAAAAGGCTTCCACCCGGAATGTGGACTGGAATGATGACGCACCTCAAAATAAAGTCGACG
ATAATGTTCCGATTGGGCTACGCAAAATTCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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